Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 AL118496.2-201ENST00000448300 230 ntBASIC4.11□□□□□ -1.75
TRIM39Q9HCM9 RN7SL604P-201ENST00000492589 296 ntBASIC4.11□□□□□ -1.75
TRIM39Q9HCM9 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM39Q9HCM9 RN7SKP13-201ENST00000515933 244 ntBASIC4.11□□□□□ -1.75
TRIM39Q9HCM9 RNU1-86P-201ENST00000516108 154 ntBASIC4.11□□□□□ -1.75
TRIM39Q9HCM9 RNU1-107P-201ENST00000516617 154 ntBASIC4.11□□□□□ -1.75
TRIM39Q9HCM9 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM39Q9HCM9 AL163153.1-201ENST00000554223 283 ntBASIC4.11□□□□□ -1.75
TRIM39Q9HCM9 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM39Q9HCM9 AC078795.3-201ENST00000602913 472 ntBASIC4.11□□□□□ -1.75
TRIM39Q9HCM9 AP000787.2-201ENST00000604432 568 ntBASIC4.11□□□□□ -1.75
TRIM39Q9HCM9 AL591034.3-201ENST00000605511 685 ntBASIC4.11□□□□□ -1.75
TRIM39Q9HCM9 Y_RNA.812-201ENST00000610788 101 ntBASIC4.11□□□□□ -1.75
TRIM39Q9HCM9 Y_RNA.784-201ENST00000613803 101 ntBASIC4.11□□□□□ -1.75
TRIM39Q9HCM9 Y_RNA.787-201ENST00000616522 101 ntBASIC4.11□□□□□ -1.75
TRIM39Q9HCM9 Y_RNA.780-201ENST00000617336 101 ntBASIC4.11□□□□□ -1.75
TRIM39Q9HCM9 Y_RNA.801-201ENST00000619005 101 ntBASIC4.11□□□□□ -1.75
TRIM39Q9HCM9 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM39Q9HCM9 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM39Q9HCM9 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
TRIM39Q9HCM9 MTND4P27-201ENST00000450813 1354 ntBASIC4.11□□□□□ -1.75
TRIM39Q9HCM9 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM39Q9HCM9 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM39Q9HCM9 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 AC007685.1-201ENST00000329806 452 ntBASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 RNU6-1188P-201ENST00000363795 107 ntBASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 AL590632.1-201ENST00000424289 371 ntBASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 AC004975.1-201ENST00000428733 208 ntBASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 AL078601.1-201ENST00000444542 271 ntBASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 AL583843.1-201ENST00000456070 346 ntBASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 RNU7-152P-201ENST00000458982 64 ntBASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 AC027575.1-201ENST00000481064 460 ntBASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 AC006499.6-201ENST00000511169 607 ntBASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 Y_RNA.708-201ENST00000516950 96 ntBASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 SNORA31.19-201ENST00000517079 126 ntBASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 BNIP3P22-201ENST00000593399 556 ntBASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 AC004825.2-201ENST00000616634 455 ntBASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 AC112484.5-201ENST00000624189 228 ntBASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 AC134503.1-201ENST00000633048 54 ntBASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 CUL1P1-201ENST00000509510 2425 ntBASIC4.1□□□□□ -1.75
TRIM39Q9HCM9 MTND5P10-201ENST00000603719 1809 ntBASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 SNORD3E-201ENST00000362899 217 ntBASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 Y_RNA.187-201ENST00000363918 113 ntBASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 Y_RNA.394-201ENST00000383942 103 ntBASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 SNORA75B-201ENST00000384053 137 ntBASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 SNORA40C-201ENST00000391285 128 ntBASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 RN7SKP53-201ENST00000411337 315 ntBASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 YPEL5P1-201ENST00000419731 367 ntBASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 AC098614.2-201ENST00000426040 255 ntBASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 HLA-N-201ENST00000437516 135 ntBASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 AC006011.1-201ENST00000442758 349 ntBASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 RPL30P15-201ENST00000457129 321 ntBASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 AC092436.3-201ENST00000511788 257 ntBASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 RNU6-572P-201ENST00000516724 80 ntBASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 AC009902.1-201ENST00000519351 183 ntBASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 TOMM20P2-201ENST00000540082 421 ntBASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 AC007224.1-201ENST00000564410 144 ntBASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 AL627309.6-201ENST00000606857 840 ntBASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 AL110115.1-201ENST00000614396 364 ntBASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 AL731566.2-201ENST00000618971 317 ntBASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 AC098657.3-201ENST00000620434 263 ntBASIC4.09□□□□□ -1.75
TRIM39Q9HCM9 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.09□□□□□ -1.76
TRIM39Q9HCM9 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
TRIM39Q9HCM9 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
TRIM39Q9HCM9 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
TRIM39Q9HCM9 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM39Q9HCM9 Y_RNA.128-201ENST00000363391 112 ntBASIC4.08□□□□□ -1.76
TRIM39Q9HCM9 RN7SKP227-201ENST00000364445 330 ntBASIC4.08□□□□□ -1.76
TRIM39Q9HCM9 SNORD14B-201ENST00000364533 90 ntBASIC4.08□□□□□ -1.76
TRIM39Q9HCM9 MIR10A-201ENST00000385043 110 ntBASIC4.08□□□□□ -1.76
TRIM39Q9HCM9 RNU6-328P-201ENST00000390887 106 ntBASIC4.08□□□□□ -1.76
TRIM39Q9HCM9 AL445529.1-201ENST00000398713 389 ntBASIC4.08□□□□□ -1.76
TRIM39Q9HCM9 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms