Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 MIR9-1-201ENST00000385198 89 ntBASIC2.6□□□□□ -1.99
DDX47Q9H0S4 RPL17P50-201ENST00000396131 546 ntBASIC2.6□□□□□ -1.99
DDX47Q9H0S4 COTL1P1-201ENST00000422309 375 ntBASIC2.6□□□□□ -1.99
DDX47Q9H0S4 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.6□□□□□ -1.99
DDX47Q9H0S4 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.6□□□□□ -1.99
DDX47Q9H0S4 AC107083.1-201ENST00000439643 279 ntBASIC2.6□□□□□ -1.99
DDX47Q9H0S4 AL445687.1-201ENST00000439946 251 ntBASIC2.6□□□□□ -1.99
DDX47Q9H0S4 MTND4P25-201ENST00000441039 533 ntBASIC2.6□□□□□ -1.99
DDX47Q9H0S4 HMGN2P10-201ENST00000448085 265 ntBASIC2.6□□□□□ -1.99
DDX47Q9H0S4 EPS15P1-201ENST00000448836 336 ntBASIC2.6□□□□□ -1.99
DDX47Q9H0S4 AL590365.1-201ENST00000450788 243 ntBASIC2.6□□□□□ -1.99
DDX47Q9H0S4 MTND1P12-201ENST00000455231 147 ntBASIC2.6□□□□□ -1.99
DDX47Q9H0S4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.6□□□□□ -1.99
DDX47Q9H0S4 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.6□□□□□ -1.99
DDX47Q9H0S4 AC128713.1-201ENST00000471495 306 ntBASIC2.6□□□□□ -1.99
DDX47Q9H0S4 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.6□□□□□ -1.99
DDX47Q9H0S4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.6□□□□□ -1.99
DDX47Q9H0S4 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.6□□□□□ -1.99
DDX47Q9H0S4 RPL39P36-201ENST00000490784 156 ntBASIC2.6□□□□□ -1.99
DDX47Q9H0S4 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.6□□□□□ -1.99
DDX47Q9H0S4 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.6□□□□□ -1.99
DDX47Q9H0S4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.6□□□□□ -1.99
DDX47Q9H0S4 OR5BN1P-201ENST00000532955 829 ntBASIC2.6□□□□□ -1.99
DDX47Q9H0S4 AC021739.1-201ENST00000559631 174 ntBASIC2.6□□□□□ -1.99
DDX47Q9H0S4 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.6□□□□□ -1.99
DDX47Q9H0S4 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.6□□□□□ -1.99
DDX47Q9H0S4 LARP7P3-201ENST00000579888 337 ntBASIC2.6□□□□□ -1.99
DDX47Q9H0S4 AC005261.5-201ENST00000596280 355 ntBASIC2.6□□□□□ -1.99
DDX47Q9H0S4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.6□□□□□ -1.99
DDX47Q9H0S4 AC073544.2-201ENST00000601155 540 ntBASIC2.6□□□□□ -1.99
DDX47Q9H0S4 AL645944.1-201ENST00000603857 493 ntBASIC2.6□□□□□ -1.99
DDX47Q9H0S4 AL355816.2-201ENST00000610049 647 ntBASIC2.6□□□□□ -1.99
DDX47Q9H0S4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.6□□□□□ -1.99
DDX47Q9H0S4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.6□□□□□ -1.99
DDX47Q9H0S4 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
DDX47Q9H0S4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.6□□□□□ -1.99
DDX47Q9H0S4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
DDX47Q9H0S4 AC004520.1-201ENST00000608362 1413 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
DDX47Q9H0S4 RNU6-7-201ENST00000364784 107 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 RNU6-8-201ENST00000365467 107 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.59□□□□□ -1.99
DDX47Q9H0S4 RNU1-138P-201ENST00000384093 164 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 U3.26-201ENST00000391236 204 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 FCF1P10-201ENST00000407590 479 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 RPS12P24-201ENST00000412619 387 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 RPS15AP12-201ENST00000419498 388 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 SEPT2P1-201ENST00000419651 180 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 AC006366.1-201ENST00000422002 759 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.59□□□□□ -1.99
DDX47Q9H0S4 AC098826.1-201ENST00000433943 471 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 UBE2D3P1-201ENST00000436669 444 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.59□□□□□ -1.99
DDX47Q9H0S4 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.59□□□□□ -1.99
DDX47Q9H0S4 AC026801.1-201ENST00000497178 464 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.59□□□□□ -1.99
DDX47Q9H0S4 AC005178.1-201ENST00000508392 440 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.59□□□□□ -1.99
DDX47Q9H0S4 AC022447.1-201ENST00000515358 464 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 SNORA31.6-201ENST00000516241 130 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 SNORA31.11-201ENST00000516528 139 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 RNU6-1092P-201ENST00000516955 87 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.59□□□□□ -1.99
DDX47Q9H0S4 AC006199.1-201ENST00000548728 219 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 AC007151.1-201ENST00000572774 483 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 AC090616.2-202ENST00000584248 222 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 AL391813.1-201ENST00000603098 260 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 AC104763.2-201ENST00000604179 382 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 AC135507.1-201ENST00000607214 561 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 AL365204.3-201ENST00000612448 685 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 AC092140.2-201ENST00000618027 521 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 FRG1KP-201ENST00000623592 341 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 AL137790.1-201ENST00000634283 177 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 MTND5P42-201ENST00000637720 498 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 AC135776.4-201ENST00000624300 1904 ntBASIC2.59□□□□□ -1.99
DDX47Q9H0S4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.59□□□□□ -2
DDX47Q9H0S4 AL137003.2-201ENST00000606924 2538 ntBASIC2.59□□□□□ -2
DDX47Q9H0S4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.58□□□□□ -2
DDX47Q9H0S4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.58□□□□□ -2
DDX47Q9H0S4 RNU1-51P-201ENST00000365345 176 ntBASIC2.58□□□□□ -2
DDX47Q9H0S4 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.58□□□□□ -2
DDX47Q9H0S4 AL360182.1-201ENST00000397433 468 ntBASIC2.58□□□□□ -2
DDX47Q9H0S4 Y_RNA.608-201ENST00000410647 95 ntBASIC2.58□□□□□ -2
DDX47Q9H0S4 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.58□□□□□ -2
DDX47Q9H0S4 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.58□□□□□ -2
DDX47Q9H0S4 SUMO1P4-201ENST00000429430 302 ntBASIC2.58□□□□□ -2
DDX47Q9H0S4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.58□□□□□ -2
DDX47Q9H0S4 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.58□□□□□ -2
DDX47Q9H0S4 RNU6-953P-201ENST00000459154 107 ntBASIC2.58□□□□□ -2
DDX47Q9H0S4 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.58□□□□□ -2
DDX47Q9H0S4 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.58□□□□□ -2
DDX47Q9H0S4 AP003122.3-201ENST00000526316 255 ntBASIC2.58□□□□□ -2
DDX47Q9H0S4 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.58□□□□□ -2
DDX47Q9H0S4 AC084851.1-201ENST00000529105 249 ntBASIC2.58□□□□□ -2
DDX47Q9H0S4 EIF4BP1-201ENST00000554881 351 ntBASIC2.58□□□□□ -2
DDX47Q9H0S4 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.58□□□□□ -2
DDX47Q9H0S4 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.58□□□□□ -2
DDX47Q9H0S4 BNIP3P9-201ENST00000603714 553 ntBASIC2.58□□□□□ -2
DDX47Q9H0S4 AC018638.7-201ENST00000605836 1114 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms