Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AC104136.1-201ENST00000512969 394 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 RNU6-1143P-201ENST00000516125 104 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 RNU4-77P-201ENST00000516692 156 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 AC008489.1-201ENST00000524271 483 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF38Q9H0F5 SNRPGP16-201ENST00000533275 226 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 HSBP1P1-201ENST00000555205 166 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 MTND6P33-201ENST00000571794 183 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 SNORD58B-201ENST00000607313 66 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 AC107871.2-201ENST00000612894 502 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 AL359547.2-201ENST00000615810 418 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 MIR7151-201ENST00000617477 60 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 AC138627.2-201ENST00000624202 601 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
RNF38Q9H0F5 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF38Q9H0F5 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF38Q9H0F5 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF38Q9H0F5 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF38Q9H0F5 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.33□□□□□ -1.72
RNF38Q9H0F5 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RNF38Q9H0F5 AC009812.4-201ENST00000569134 1805 ntBASIC4.32□□□□□ -1.72
RNF38Q9H0F5 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RNF38Q9H0F5 RNU6-1303P-201ENST00000364841 107 ntBASIC4.32□□□□□ -1.72
RNF38Q9H0F5 RNU1-64P-201ENST00000365443 163 ntBASIC4.32□□□□□ -1.72
RNF38Q9H0F5 RNU6-76P-201ENST00000384060 104 ntBASIC4.32□□□□□ -1.72
RNF38Q9H0F5 Y_RNA.424-201ENST00000384063 103 ntBASIC4.32□□□□□ -1.72
RNF38Q9H0F5 RNU6-214P-201ENST00000384130 107 ntBASIC4.32□□□□□ -1.72
RNF38Q9H0F5 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.32□□□□□ -1.72
RNF38Q9H0F5 RNU2-23P-201ENST00000410545 195 ntBASIC4.32□□□□□ -1.72
RNF38Q9H0F5 RAC1P3-201ENST00000416129 580 ntBASIC4.32□□□□□ -1.72
RNF38Q9H0F5 RBMY1KP-201ENST00000423480 476 ntBASIC4.32□□□□□ -1.72
RNF38Q9H0F5 AC097713.2-201ENST00000430199 356 ntBASIC4.32□□□□□ -1.72
RNF38Q9H0F5 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.32□□□□□ -1.72
RNF38Q9H0F5 RPS6P12-201ENST00000432491 726 ntBASIC4.32□□□□□ -1.72
RNF38Q9H0F5 AL591212.2-201ENST00000433923 257 ntBASIC4.32□□□□□ -1.72
RNF38Q9H0F5 RPL23AP46-201ENST00000438548 490 ntBASIC4.32□□□□□ -1.72
RNF38Q9H0F5 AL359672.1-201ENST00000442302 409 ntBASIC4.32□□□□□ -1.72
RNF38Q9H0F5 AC006011.1-201ENST00000442758 349 ntBASIC4.32□□□□□ -1.72
RNF38Q9H0F5 NEFMP1-201ENST00000443423 1006 ntBASIC4.32□□□□□ -1.72
RNF38Q9H0F5 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RNF38Q9H0F5 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.32□□□□□ -1.72
RNF38Q9H0F5 SNORD5.1-201ENST00000458800 75 ntBASIC4.32□□□□□ -1.72
RNF38Q9H0F5 RPL31P13-201ENST00000484151 370 ntBASIC4.32□□□□□ -1.72
RNF38Q9H0F5 RPL22P13-201ENST00000493291 347 ntBASIC4.32□□□□□ -1.72
RNF38Q9H0F5 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.32□□□□□ -1.72
RNF38Q9H0F5 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.32□□□□□ -1.72
RNF38Q9H0F5 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF38Q9H0F5 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.32□□□□□ -1.72
RNF38Q9H0F5 AC131281.1-201ENST00000522984 164 ntBASIC4.32□□□□□ -1.72
RNF38Q9H0F5 AP004242.1-201ENST00000533701 349 ntBASIC4.32□□□□□ -1.72
RNF38Q9H0F5 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.32□□□□□ -1.72
RNF38Q9H0F5 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF38Q9H0F5 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF38Q9H0F5 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.32□□□□□ -1.72
RNF38Q9H0F5 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF38Q9H0F5 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.32□□□□□ -1.72
RNF38Q9H0F5 MIR6875-201ENST00000617506 72 ntBASIC4.32□□□□□ -1.72
RNF38Q9H0F5 AC007998.5-201ENST00000622938 237 ntBASIC4.32□□□□□ -1.72
RNF38Q9H0F5 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.32□□□□□ -1.72
RNF38Q9H0F5 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF38Q9H0F5 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF38Q9H0F5 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.31□□□□□ -1.72
RNF38Q9H0F5 AC116667.1-201ENST00000604855 2072 ntBASIC4.31□□□□□ -1.72
RNF38Q9H0F5 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
RNF38Q9H0F5 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF38Q9H0F5 RNU6-600P-201ENST00000362524 99 ntBASIC4.31□□□□□ -1.72
RNF38Q9H0F5 SNORA31-201ENST00000362607 130 ntBASIC4.31□□□□□ -1.72
RNF38Q9H0F5 Y_RNA.489-201ENST00000384410 101 ntBASIC4.31□□□□□ -1.72
RNF38Q9H0F5 RNU6-55P-201ENST00000411092 107 ntBASIC4.31□□□□□ -1.72
RNF38Q9H0F5 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.31□□□□□ -1.72
RNF38Q9H0F5 MTATP6P4-201ENST00000427725 675 ntBASIC4.31□□□□□ -1.72
RNF38Q9H0F5 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.31□□□□□ -1.72
RNF38Q9H0F5 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF38Q9H0F5 AL353748.1-201ENST00000440753 474 ntBASIC4.31□□□□□ -1.72
RNF38Q9H0F5 RPL23AP31-201ENST00000456160 467 ntBASIC4.31□□□□□ -1.72
RNF38Q9H0F5 RPL9P32-201ENST00000464118 620 ntBASIC4.31□□□□□ -1.72
RNF38Q9H0F5 AC084198.1-201ENST00000477747 402 ntBASIC4.31□□□□□ -1.72
RNF38Q9H0F5 AC105758.1-201ENST00000506038 399 ntBASIC4.31□□□□□ -1.72
RNF38Q9H0F5 AC092436.3-201ENST00000511788 257 ntBASIC4.31□□□□□ -1.72
RNF38Q9H0F5 AP006587.4-201ENST00000526053 529 ntBASIC4.31□□□□□ -1.72
RNF38Q9H0F5 AC091516.1-201ENST00000549191 703 ntBASIC4.31□□□□□ -1.72
RNF38Q9H0F5 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF38Q9H0F5 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF38Q9H0F5 MIR1254-2-201ENST00000579553 63 ntBASIC4.31□□□□□ -1.72
RNF38Q9H0F5 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF38Q9H0F5 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF38Q9H0F5 AC093227.2-201ENST00000589357 285 ntBASIC4.31□□□□□ -1.72
RNF38Q9H0F5 AC002044.1-201ENST00000606707 158 ntBASIC4.31□□□□□ -1.72
RNF38Q9H0F5 MIR7154-201ENST00000620673 73 ntBASIC4.31□□□□□ -1.72
RNF38Q9H0F5 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.31□□□□□ -1.72
RNF38Q9H0F5 AL606534.2-204ENST00000635008 178 ntBASIC4.31□□□□□ -1.72
RNF38Q9H0F5 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF38Q9H0F5 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF38Q9H0F5 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.31□□□□□ -1.72
RNF38Q9H0F5 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
RNF38Q9H0F5 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF38Q9H0F5 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.3□□□□□ -1.72
RNF38Q9H0F5 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
RNF38Q9H0F5 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF38Q9H0F5 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms