Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 AC110760.3-201ENST00000598794 467 ntBASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 AC004805.2-201ENST00000605382 482 ntBASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 AC069528.2-201ENST00000624849 1991 ntBASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 MTND5P29-201ENST00000458676 1807 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 UBE2L2-201ENST00000254302 429 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 HSPE1P11-201ENST00000339579 310 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 Y_RNA.22-201ENST00000362492 102 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 U3.4-201ENST00000363352 213 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 RNA5SP456-201ENST00000364002 114 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 Y_RNA.245-201ENST00000364493 95 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 RNU6-39P-201ENST00000384344 107 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 Y_RNA.534-201ENST00000384599 112 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 RNU6-817P-201ENST00000391083 104 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 RPL23AP32-201ENST00000395315 459 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 AL139039.1-201ENST00000401900 692 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 FCF1P10-201ENST00000407590 479 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 RPS3AP3-201ENST00000411933 242 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 AC007283.2-201ENST00000424739 197 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 ARL5AP4-201ENST00000430731 512 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 RPS27P26-201ENST00000494583 239 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 RAC1P5-201ENST00000512182 576 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 AC118465.1-201ENST00000513820 1271 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 Y_RNA.672-201ENST00000516289 104 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 RNU6-703P-201ENST00000516946 107 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 RNA5SP290-201ENST00000517133 127 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 RNA5SP402-201ENST00000517148 110 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 RNA5SP291-201ENST00000517222 105 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 RPL23AP78-201ENST00000599928 470 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 AC010620.2-201ENST00000600135 313 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 ATP1B3P1-201ENST00000605365 821 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 AP002360.4-201ENST00000606980 481 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 AL365204.3-201ENST00000612448 685 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 AC104237.2-201ENST00000612456 443 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 AC073308.1-201ENST00000623696 305 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 AC025048.6-202ENST00000627667 438 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 AP003399.1-201ENST00000637534 361 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 MTND5P42-201ENST00000637720 498 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 ZNF271P-202ENST00000465539 1970 ntBASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.06□□□□□ -2.08
HDHD3Q9BSH5 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 FGF7P2-201ENST00000332473 296 ntBASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 MIR208A-201ENST00000362287 71 ntBASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 RNU6-884P-201ENST00000363889 107 ntBASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 RNU6-512P-201ENST00000364438 103 ntBASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 RNU6-1180P-201ENST00000364935 107 ntBASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 HMGN1P14-201ENST00000412459 517 ntBASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 AL513477.1-202ENST00000417061 214 ntBASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 RPS15AP12-201ENST00000419498 388 ntBASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 BPY2DP-201ENST00000422208 265 ntBASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 RPL7P37-201ENST00000425095 738 ntBASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 AC104850.1-201ENST00000435940 476 ntBASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 MTND2P4-201ENST00000445034 1004 ntBASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 GAPDHP17-201ENST00000449858 1001 ntBASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 RN7SL432P-201ENST00000484057 298 ntBASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 MTND1P3-201ENST00000484956 952 ntBASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 RPL36AP51-201ENST00000487216 318 ntBASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 RPS27AP10-201ENST00000496103 208 ntBASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 SUMO2P6-201ENST00000505273 288 ntBASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 AC114786.4-201ENST00000508771 728 ntBASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 NDUFB4P2-201ENST00000509515 391 ntBASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 AC010486.3-201ENST00000511602 785 ntBASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 RNA5SP320-201ENST00000516263 124 ntBASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 RNU6-1220P-201ENST00000517126 108 ntBASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 MTCO1P47-201ENST00000523889 1271 ntBASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 AC022616.3-201ENST00000523940 148 ntBASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 OR5BN1P-201ENST00000532955 829 ntBASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 MIR3167-201ENST00000579623 85 ntBASIC2.05□□□□□ -2.08
HDHD3Q9BSH5 AP005136.1-201ENST00000579765 429 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms