Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AC100870.1-201ENST00000522035 505 ntBASIC3.19□□□□□ -1.9
NEK1Q96PY6 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NEK1Q96PY6 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.19□□□□□ -1.9
NEK1Q96PY6 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.19□□□□□ -1.9
NEK1Q96PY6 AC128657.1-201ENST00000549459 145 ntBASIC3.19□□□□□ -1.9
NEK1Q96PY6 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.19□□□□□ -1.9
NEK1Q96PY6 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.19□□□□□ -1.9
NEK1Q96PY6 AC138761.3-201ENST00000579993 334 ntBASIC3.19□□□□□ -1.9
NEK1Q96PY6 MIR3682-201ENST00000581338 84 ntBASIC3.19□□□□□ -1.9
NEK1Q96PY6 GLUD1P4-201ENST00000590914 418 ntBASIC3.19□□□□□ -1.9
NEK1Q96PY6 AC020895.1-201ENST00000595362 272 ntBASIC3.19□□□□□ -1.9
NEK1Q96PY6 DPPA3P3-201ENST00000603842 430 ntBASIC3.19□□□□□ -1.9
NEK1Q96PY6 AC104763.2-201ENST00000604179 382 ntBASIC3.19□□□□□ -1.9
NEK1Q96PY6 AC019159.1-201ENST00000605094 187 ntBASIC3.19□□□□□ -1.9
NEK1Q96PY6 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.19□□□□□ -1.9
NEK1Q96PY6 AC091304.9-201ENST00000612091 226 ntBASIC3.19□□□□□ -1.9
NEK1Q96PY6 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.19□□□□□ -1.9
NEK1Q96PY6 LRRC77P-213ENST00000637727 880 ntBASIC3.19□□□□□ -1.9
NEK1Q96PY6 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.19□□□□□ -1.9
NEK1Q96PY6 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NEK1Q96PY6 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.19□□□□□ -1.9
NEK1Q96PY6 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.18□□□□□ -1.9
NEK1Q96PY6 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.18□□□□□ -1.9
NEK1Q96PY6 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.18□□□□□ -1.9
NEK1Q96PY6 RNU6-1284P-201ENST00000363701 100 ntBASIC3.18□□□□□ -1.9
NEK1Q96PY6 FO393413.1-201ENST00000402892 195 ntBASIC3.18□□□□□ -1.9
NEK1Q96PY6 AL513331.1-201ENST00000411908 397 ntBASIC3.18□□□□□ -1.9
NEK1Q96PY6 BTF3L4P1-201ENST00000413813 468 ntBASIC3.18□□□□□ -1.9
NEK1Q96PY6 AC016907.1-201ENST00000419483 435 ntBASIC3.18□□□□□ -1.9
NEK1Q96PY6 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.18□□□□□ -1.9
NEK1Q96PY6 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.18□□□□□ -1.9
NEK1Q96PY6 AC007919.1-201ENST00000429380 217 ntBASIC3.18□□□□□ -1.9
NEK1Q96PY6 AL121890.1-201ENST00000435457 205 ntBASIC3.18□□□□□ -1.9
NEK1Q96PY6 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.18□□□□□ -1.9
NEK1Q96PY6 AC244505.5-201ENST00000443639 207 ntBASIC3.18□□□□□ -1.9
NEK1Q96PY6 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.18□□□□□ -1.9
NEK1Q96PY6 GAPDHP17-201ENST00000449858 1001 ntBASIC3.18□□□□□ -1.9
NEK1Q96PY6 MTND1P12-201ENST00000455231 147 ntBASIC3.18□□□□□ -1.9
NEK1Q96PY6 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.18□□□□□ -1.9
NEK1Q96PY6 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.18□□□□□ -1.9
NEK1Q96PY6 ARL2BPP4-201ENST00000506854 471 ntBASIC3.18□□□□□ -1.9
NEK1Q96PY6 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.18□□□□□ -1.9
NEK1Q96PY6 AC022447.1-201ENST00000515358 464 ntBASIC3.18□□□□□ -1.9
NEK1Q96PY6 RNU6-237P-201ENST00000515985 71 ntBASIC3.18□□□□□ -1.9
NEK1Q96PY6 SNORA18.6-201ENST00000516792 115 ntBASIC3.18□□□□□ -1.9
NEK1Q96PY6 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NEK1Q96PY6 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NEK1Q96PY6 ARL2BPP2-201ENST00000550907 489 ntBASIC3.18□□□□□ -1.9
NEK1Q96PY6 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.18□□□□□ -1.9
NEK1Q96PY6 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.18□□□□□ -1.9
NEK1Q96PY6 AC023043.3-201ENST00000593113 385 ntBASIC3.18□□□□□ -1.9
NEK1Q96PY6 AL035413.2-201ENST00000604801 525 ntBASIC3.18□□□□□ -1.9
NEK1Q96PY6 AC103710.2-201ENST00000609912 942 ntBASIC3.18□□□□□ -1.9
NEK1Q96PY6 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NEK1Q96PY6 MIR6733-201ENST00000635723 61 ntBASIC3.18□□□□□ -1.9
NEK1Q96PY6 AC099654.7-201ENST00000635788 2127 ntBASIC3.18□□□□□ -1.9
NEK1Q96PY6 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NEK1Q96PY6 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.18□□□□□ -1.9
NEK1Q96PY6 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NEK1Q96PY6 AC022336.2-201ENST00000568966 2538 ntBASIC3.18□□□□□ -1.9
NEK1Q96PY6 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.17□□□□□ -1.9
NEK1Q96PY6 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NEK1Q96PY6 RPL23AP32-201ENST00000395315 459 ntBASIC3.17□□□□□ -1.9
NEK1Q96PY6 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NEK1Q96PY6 RNU2-36P-201ENST00000410361 191 ntBASIC3.17□□□□□ -1.9
NEK1Q96PY6 BTF3L4P3-201ENST00000418879 476 ntBASIC3.17□□□□□ -1.9
NEK1Q96PY6 ELOCP4-201ENST00000420090 333 ntBASIC3.17□□□□□ -1.9
NEK1Q96PY6 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.17□□□□□ -1.9
NEK1Q96PY6 AC063976.3-201ENST00000426849 329 ntBASIC3.17□□□□□ -1.9
NEK1Q96PY6 AC137499.1-201ENST00000427602 88 ntBASIC3.17□□□□□ -1.9
NEK1Q96PY6 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.17□□□□□ -1.9
NEK1Q96PY6 AC104850.1-201ENST00000435940 476 ntBASIC3.17□□□□□ -1.9
NEK1Q96PY6 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.17□□□□□ -1.9
NEK1Q96PY6 CBWD4P-201ENST00000445695 655 ntBASIC3.17□□□□□ -1.9
NEK1Q96PY6 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.17□□□□□ -1.9
NEK1Q96PY6 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.17□□□□□ -1.9
NEK1Q96PY6 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.17□□□□□ -1.9
NEK1Q96PY6 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.17□□□□□ -1.9
NEK1Q96PY6 RBM43P1-201ENST00000476891 1081 ntBASIC3.17□□□□□ -1.9
NEK1Q96PY6 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.17□□□□□ -1.9
NEK1Q96PY6 RN7SL499P-201ENST00000481141 276 ntBASIC3.17□□□□□ -1.9
NEK1Q96PY6 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.17□□□□□ -1.9
NEK1Q96PY6 AC098799.2-201ENST00000509466 868 ntBASIC3.17□□□□□ -1.9
NEK1Q96PY6 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.17□□□□□ -1.9
NEK1Q96PY6 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.17□□□□□ -1.9
NEK1Q96PY6 AC011979.2-201ENST00000527568 352 ntBASIC3.17□□□□□ -1.9
NEK1Q96PY6 MIR3611-201ENST00000584484 83 ntBASIC3.17□□□□□ -1.9
NEK1Q96PY6 AC090578.1-201ENST00000604955 591 ntBASIC3.17□□□□□ -1.9
NEK1Q96PY6 RPL23AP88-201ENST00000605759 454 ntBASIC3.17□□□□□ -1.9
NEK1Q96PY6 AC245008.1-201ENST00000608123 476 ntBASIC3.17□□□□□ -1.9
NEK1Q96PY6 AC006566.1-201ENST00000608943 513 ntBASIC3.17□□□□□ -1.9
NEK1Q96PY6 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NEK1Q96PY6 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
NEK1Q96PY6 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NEK1Q96PY6 FARSBP1-201ENST00000435808 1778 ntBASIC3.16□□□□□ -1.9
NEK1Q96PY6 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NEK1Q96PY6 RNU4-1-201ENST00000363925 141 ntBASIC3.16□□□□□ -1.9
NEK1Q96PY6 Y_RNA.359-201ENST00000365498 102 ntBASIC3.16□□□□□ -1.9
NEK1Q96PY6 RNU1-109P-201ENST00000383960 147 ntBASIC3.16□□□□□ -1.9
NEK1Q96PY6 RNU6-701P-201ENST00000384059 107 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms