Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 RNA5SP291-201ENST00000517222 105 ntBASIC2.38□□□□□ -2.03
USP47Q96K76 AC021451.1-201ENST00000523498 1129 ntBASIC2.38□□□□□ -2.03
USP47Q96K76 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.38□□□□□ -2.03
USP47Q96K76 AC087465.1-201ENST00000560574 245 ntBASIC2.38□□□□□ -2.03
USP47Q96K76 SUB1P3-201ENST00000564581 315 ntBASIC2.38□□□□□ -2.03
USP47Q96K76 MIR3618-201ENST00000580330 88 ntBASIC2.38□□□□□ -2.03
USP47Q96K76 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.38□□□□□ -2.03
USP47Q96K76 AC006270.3-201ENST00000605967 1036 ntBASIC2.38□□□□□ -2.03
USP47Q96K76 AC131235.4-201ENST00000609288 620 ntBASIC2.38□□□□□ -2.03
USP47Q96K76 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
USP47Q96K76 AC010133.1-201ENST00000615809 842 ntBASIC2.38□□□□□ -2.03
USP47Q96K76 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
USP47Q96K76 AC116618.1-201ENST00000634617 774 ntBASIC2.38□□□□□ -2.03
USP47Q96K76 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.38□□□□□ -2.03
USP47Q96K76 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
USP47Q96K76 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
USP47Q96K76 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
USP47Q96K76 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
USP47Q96K76 RNU6-744P-201ENST00000365557 107 ntBASIC2.37□□□□□ -2.03
USP47Q96K76 RNU6-1316P-201ENST00000384242 108 ntBASIC2.37□□□□□ -2.03
USP47Q96K76 SNORA67.5-201ENST00000391036 107 ntBASIC2.37□□□□□ -2.03
USP47Q96K76 MTND1P21-201ENST00000412991 285 ntBASIC2.37□□□□□ -2.03
USP47Q96K76 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.37□□□□□ -2.03
USP47Q96K76 ZNF863P-201ENST00000426746 417 ntBASIC2.37□□□□□ -2.03
USP47Q96K76 USP9YP11-201ENST00000427537 717 ntBASIC2.37□□□□□ -2.03
USP47Q96K76 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.37□□□□□ -2.03
USP47Q96K76 SUMO1P4-201ENST00000429430 302 ntBASIC2.37□□□□□ -2.03
USP47Q96K76 HMGB1P27-201ENST00000431429 603 ntBASIC2.37□□□□□ -2.03
USP47Q96K76 RPL12P25-201ENST00000455592 494 ntBASIC2.37□□□□□ -2.03
USP47Q96K76 RPL37P25-201ENST00000507308 276 ntBASIC2.37□□□□□ -2.03
USP47Q96K76 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.37□□□□□ -2.03
USP47Q96K76 AC113155.1-201ENST00000511141 769 ntBASIC2.37□□□□□ -2.03
USP47Q96K76 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.37□□□□□ -2.03
USP47Q96K76 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.37□□□□□ -2.03
USP47Q96K76 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.37□□□□□ -2.03
USP47Q96K76 MIR4303-201ENST00000581299 66 ntBASIC2.37□□□□□ -2.03
USP47Q96K76 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.37□□□□□ -2.03
USP47Q96K76 AC002545.1-201ENST00000592511 181 ntBASIC2.37□□□□□ -2.03
USP47Q96K76 FTX_3.1-201ENST00000610451 147 ntBASIC2.37□□□□□ -2.03
USP47Q96K76 AC004808.1-201ENST00000627671 721 ntBASIC2.37□□□□□ -2.03
USP47Q96K76 MIR7515-201ENST00000637837 67 ntBASIC2.37□□□□□ -2.03
USP47Q96K76 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.37□□□□□ -2.03
USP47Q96K76 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
USP47Q96K76 UBE2L2-201ENST00000254302 429 ntBASIC2.36□□□□□ -2.03
USP47Q96K76 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USP47Q96K76 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.36□□□□□ -2.03
USP47Q96K76 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.36□□□□□ -2.03
USP47Q96K76 MIR144-201ENST00000384886 86 ntBASIC2.36□□□□□ -2.03
USP47Q96K76 UBE2V1P13-201ENST00000436983 439 ntBASIC2.36□□□□□ -2.03
USP47Q96K76 COX7BP2-201ENST00000437976 242 ntBASIC2.36□□□□□ -2.03
USP47Q96K76 AC092473.1-201ENST00000441098 221 ntBASIC2.36□□□□□ -2.03
USP47Q96K76 MTCO1P53-201ENST00000441633 699 ntBASIC2.36□□□□□ -2.03
USP47Q96K76 AL358794.1-201ENST00000445689 381 ntBASIC2.36□□□□□ -2.03
USP47Q96K76 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
USP47Q96K76 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.36□□□□□ -2.03
USP47Q96K76 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.36□□□□□ -2.03
USP47Q96K76 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.36□□□□□ -2.03
USP47Q96K76 RPS29P20-201ENST00000489592 171 ntBASIC2.36□□□□□ -2.03
USP47Q96K76 AC135721.1-201ENST00000497954 479 ntBASIC2.36□□□□□ -2.03
USP47Q96K76 AC114786.4-201ENST00000508771 728 ntBASIC2.36□□□□□ -2.03
USP47Q96K76 AC079395.1-201ENST00000510981 262 ntBASIC2.36□□□□□ -2.03
USP47Q96K76 AC114797.1-201ENST00000514003 728 ntBASIC2.36□□□□□ -2.03
USP47Q96K76 MIR3117-201ENST00000584034 78 ntBASIC2.36□□□□□ -2.03
USP47Q96K76 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.36□□□□□ -2.03
USP47Q96K76 AC140725.3-201ENST00000616193 880 ntBASIC2.36□□□□□ -2.03
USP47Q96K76 CCT4P2-201ENST00000233836 1548 ntBASIC2.36□□□□□ -2.03
USP47Q96K76 AC011477.1-204ENST00000623416 1325 ntBASIC2.36□□□□□ -2.03
USP47Q96K76 RNU6-884P-201ENST00000363889 107 ntBASIC2.36□□□□□ -2.03
USP47Q96K76 SNORA68.1-201ENST00000364537 132 ntBASIC2.36□□□□□ -2.03
USP47Q96K76 RNU4-52P-201ENST00000384209 138 ntBASIC2.36□□□□□ -2.03
USP47Q96K76 ANAPC10P1-201ENST00000395991 556 ntBASIC2.36□□□□□ -2.03
USP47Q96K76 UBE2FP1-201ENST00000416536 447 ntBASIC2.36□□□□□ -2.03
USP47Q96K76 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.36□□□□□ -2.03
USP47Q96K76 EEF1E1P1-201ENST00000446998 430 ntBASIC2.36□□□□□ -2.03
USP47Q96K76 AC011753.1-201ENST00000451001 220 ntBASIC2.36□□□□□ -2.03
USP47Q96K76 MTCO1P42-201ENST00000457379 726 ntBASIC2.36□□□□□ -2.03
USP47Q96K76 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.36□□□□□ -2.03
USP47Q96K76 CDC42P4-201ENST00000510507 563 ntBASIC2.36□□□□□ -2.03
USP47Q96K76 AC024589.1-201ENST00000512207 263 ntBASIC2.36□□□□□ -2.03
USP47Q96K76 IGLV3-17-201ENST00000519099 244 ntBASIC2.36□□□□□ -2.03
USP47Q96K76 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.36□□□□□ -2.03
USP47Q96K76 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
USP47Q96K76 TUG1_2.1-201ENST00000614234 87 ntBASIC2.36□□□□□ -2.03
USP47Q96K76 AC109809.1-201ENST00000619665 545 ntBASIC2.36□□□□□ -2.03
USP47Q96K76 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.35□□□□□ -2.03
USP47Q96K76 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
USP47Q96K76 RNU6-461P-201ENST00000364195 107 ntBASIC2.35□□□□□ -2.03
USP47Q96K76 SNORA25.9-201ENST00000365087 128 ntBASIC2.35□□□□□ -2.03
USP47Q96K76 Y_RNA.355-201ENST00000365462 98 ntBASIC2.35□□□□□ -2.03
USP47Q96K76 RNU6-432P-201ENST00000384196 109 ntBASIC2.35□□□□□ -2.03
USP47Q96K76 AL590084.2-201ENST00000401481 382 ntBASIC2.35□□□□□ -2.03
USP47Q96K76 ERHP2-201ENST00000402323 299 ntBASIC2.35□□□□□ -2.03
USP47Q96K76 RNU2-33P-201ENST00000410344 192 ntBASIC2.35□□□□□ -2.03
USP47Q96K76 USP9YP33-201ENST00000412220 421 ntBASIC2.35□□□□□ -2.03
USP47Q96K76 AL451054.2-201ENST00000420896 202 ntBASIC2.35□□□□□ -2.03
USP47Q96K76 AC098614.2-201ENST00000426040 255 ntBASIC2.35□□□□□ -2.03
USP47Q96K76 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.35□□□□□ -2.03
USP47Q96K76 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.35□□□□□ -2.03
USP47Q96K76 USP9YP35-201ENST00000435696 412 ntBASIC2.35□□□□□ -2.03
USP47Q96K76 SNRPEP7-201ENST00000438350 220 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 539.6 ms