Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 RPS12P24-201ENST00000412619 387 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS50Q96JG6 BTF3L4P3-201ENST00000418879 476 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 AL645937.1-202ENST00000421799 937 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 MTND3P23-201ENST00000431980 347 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 AL591212.2-201ENST00000433923 257 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.58□□□□□ -1.84
VPS50Q96JG6 MRPS31P2-201ENST00000451581 518 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 SCARNA18-201ENST00000459004 134 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 AL133162.1-201ENST00000463228 453 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.58□□□□□ -1.84
VPS50Q96JG6 RPL21P93-201ENST00000480465 489 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 RPS4XP22-201ENST00000480755 780 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS50Q96JG6 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS50Q96JG6 RNU6-1256P-201ENST00000516539 103 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 RNU6-677P-201ENST00000516914 101 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 RNU6-1314P-201ENST00000517139 104 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 RANP9-201ENST00000519957 271 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 RPL7P20-201ENST00000520308 745 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 MTND4P7-201ENST00000523876 130 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 AL137161.1-201ENST00000532231 390 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 BNIP3P6-201ENST00000549284 499 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS50Q96JG6 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS50Q96JG6 FGF7P1-201ENST00000582820 288 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 AL117336.2-201ENST00000602435 335 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 C8orf59P2-201ENST00000603441 271 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 AL137849.1-201ENST00000604767 169 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 AC021646.1-201ENST00000605469 484 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 AC090132.2-201ENST00000615881 347 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 uc_338.11-201ENST00000619132 160 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.58□□□□□ -1.84
VPS50Q96JG6 MTND4P14-201ENST00000435799 1354 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS50Q96JG6 SDAD1P2-201ENST00000441308 2028 ntBASIC3.58□□□□□ -1.84
VPS50Q96JG6 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VPS50Q96JG6 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VPS50Q96JG6 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS50Q96JG6 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS50Q96JG6 Y_RNA.167-201ENST00000363735 109 ntBASIC3.57□□□□□ -1.84
VPS50Q96JG6 SNORD81.2-201ENST00000365153 76 ntBASIC3.57□□□□□ -1.84
VPS50Q96JG6 RNU6-805P-201ENST00000365643 106 ntBASIC3.57□□□□□ -1.84
VPS50Q96JG6 RNU6-1127P-201ENST00000384580 107 ntBASIC3.57□□□□□ -1.84
VPS50Q96JG6 AL591034.1-201ENST00000407447 340 ntBASIC3.57□□□□□ -1.84
VPS50Q96JG6 RPL27AP8-201ENST00000424277 446 ntBASIC3.57□□□□□ -1.84
VPS50Q96JG6 HMGB3P11-201ENST00000440127 604 ntBASIC3.57□□□□□ -1.84
VPS50Q96JG6 AC104058.1-201ENST00000448028 297 ntBASIC3.57□□□□□ -1.84
VPS50Q96JG6 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.57□□□□□ -1.84
VPS50Q96JG6 SNORD105B-201ENST00000458770 79 ntBASIC3.57□□□□□ -1.84
VPS50Q96JG6 AC084198.1-201ENST00000477747 402 ntBASIC3.57□□□□□ -1.84
VPS50Q96JG6 AC083904.1-201ENST00000487828 231 ntBASIC3.57□□□□□ -1.84
VPS50Q96JG6 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS50Q96JG6 AC092185.1-201ENST00000491371 97 ntBASIC3.57□□□□□ -1.84
VPS50Q96JG6 AC009901.1-201ENST00000506703 541 ntBASIC3.57□□□□□ -1.84
VPS50Q96JG6 RNU6-927P-201ENST00000516199 100 ntBASIC3.57□□□□□ -1.84
VPS50Q96JG6 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.57□□□□□ -1.84
VPS50Q96JG6 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.57□□□□□ -1.84
VPS50Q96JG6 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.57□□□□□ -1.84
VPS50Q96JG6 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS50Q96JG6 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS50Q96JG6 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS50Q96JG6 AC243972.3-201ENST00000539655 198 ntBASIC3.57□□□□□ -1.84
VPS50Q96JG6 AC004024.1-201ENST00000549244 247 ntBASIC3.57□□□□□ -1.84
VPS50Q96JG6 TRAV37-201ENST00000553906 342 ntBASIC3.57□□□□□ -1.84
VPS50Q96JG6 AC037471.2-201ENST00000564941 598 ntBASIC3.57□□□□□ -1.84
VPS50Q96JG6 AC174048.1-201ENST00000603389 144 ntBASIC3.57□□□□□ -1.84
VPS50Q96JG6 CTHRC1P1-201ENST00000605383 469 ntBASIC3.57□□□□□ -1.84
VPS50Q96JG6 MIR15A-201ENST00000607334 83 ntBASIC3.57□□□□□ -1.84
VPS50Q96JG6 AC092807.2-201ENST00000609367 243 ntBASIC3.57□□□□□ -1.84
VPS50Q96JG6 AC007496.3-201ENST00000624987 3443 ntBASIC3.57□□□□□ -1.84
VPS50Q96JG6 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS50Q96JG6 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS50Q96JG6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS50Q96JG6 AC073073.2-201ENST00000609827 2578 ntBASIC3.57□□□□□ -1.84
VPS50Q96JG6 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.56□□□□□ -1.84
VPS50Q96JG6 AC058791.1-201ENST00000608412 3198 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VPS50Q96JG6 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.56□□□□□ -1.84
VPS50Q96JG6 UBE2L2-201ENST00000254302 429 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 RNU6-512P-201ENST00000364438 103 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
VPS50Q96JG6 RNU6-817P-201ENST00000391083 104 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 RPL21P17-201ENST00000397467 475 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 RNU4-26P-201ENST00000410270 107 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 RNA5SP293-201ENST00000410527 113 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 EEF1A1P40-201ENST00000412883 573 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 NDUFB4P5-201ENST00000415445 361 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 RPL35AP12-201ENST00000425362 338 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.56□□□□□ -1.84
VPS50Q96JG6 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.56□□□□□ -1.84
VPS50Q96JG6 PRPS1P1-201ENST00000445305 876 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 RPL7P12-201ENST00000446719 750 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 AL358232.1-201ENST00000448030 501 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 RPS15AP27-201ENST00000449183 343 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 MTND1P11-201ENST00000456661 876 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 RPL23AP11-201ENST00000475260 469 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms