Protein–RNA interactions for Protein: Q96DZ5

CLIP3, CAP-Gly domain-containing linker protein 3, humanhuman

Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3Q96DZ5 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.07□□□□□ -1.76
CLIP3Q96DZ5 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.07□□□□□ -1.76
CLIP3Q96DZ5 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.07□□□□□ -1.76
CLIP3Q96DZ5 MIR4790-201ENST00000577799 79 ntBASIC4.07□□□□□ -1.76
CLIP3Q96DZ5 AC073539.2-201ENST00000597113 165 ntBASIC4.07□□□□□ -1.76
CLIP3Q96DZ5 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.07□□□□□ -1.76
CLIP3Q96DZ5 MIR492-201ENST00000638676 116 ntBASIC4.07□□□□□ -1.76
CLIP3Q96DZ5 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.07□□□□□ -1.76
CLIP3Q96DZ5 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLIP3Q96DZ5 AC007785.2-201ENST00000598627 1916 ntBASIC4.07□□□□□ -1.76
CLIP3Q96DZ5 EOGT-210ENST00000615922 1931 ntBASIC4.07□□□□□ -1.76
CLIP3Q96DZ5 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
CLIP3Q96DZ5 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 RNU6-1252P-201ENST00000363054 104 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 RNU6-288P-201ENST00000363690 104 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 RNU6-1222P-201ENST00000384615 107 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 Y_RNA.557-201ENST00000384680 107 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 MRPL42P3-201ENST00000401492 326 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 AP000567.1-201ENST00000406413 156 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 RNU2-33P-201ENST00000410344 192 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 SNORA74C-2-201ENST00000411179 201 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 RN7SKP53-201ENST00000411337 315 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 RNU6-954P-201ENST00000411355 107 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 VDAC1P9-201ENST00000412766 841 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 AC108032.1-201ENST00000416706 207 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 TMEM167AP1-201ENST00000423409 219 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 AL356535.1-201ENST00000440335 398 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 MTND1P17-201ENST00000448961 204 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 RPL30P15-201ENST00000457129 321 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 AC079804.1-201ENST00000461922 436 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 RPL23AP65-201ENST00000475608 468 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 AC010655.3-201ENST00000478818 450 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 AL160314.1-201ENST00000490836 438 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 RN7SL691P-201ENST00000494487 301 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 RNU6-976P-201ENST00000516086 111 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 AC090136.1-201ENST00000520009 240 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 TRAV28-201ENST00000557548 323 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 AC107294.1-201ENST00000609524 467 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 FAM27D1-201ENST00000612308 341 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 AC012409.4-201ENST00000612923 249 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 AC083806.3-201ENST00000614016 455 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 uc_338.34-201ENST00000617467 174 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 uc_338.11-201ENST00000619132 160 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 AL445363.3-201ENST00000623080 671 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 AC011155.2-201ENST00000623202 216 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 AC112484.5-201ENST00000624189 228 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 Z69720.2-201ENST00000624755 279 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 AF117829.1-206ENST00000621883 3802 ntBASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLIP3Q96DZ5 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CLIP3Q96DZ5 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.05□□□□□ -1.76
CLIP3Q96DZ5 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLIP3Q96DZ5 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLIP3Q96DZ5 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.05□□□□□ -1.76
CLIP3Q96DZ5 CUL1P1-201ENST00000509510 2425 ntBASIC4.05□□□□□ -1.76
CLIP3Q96DZ5 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CLIP3Q96DZ5 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.05□□□□□ -1.76
CLIP3Q96DZ5 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.05□□□□□ -1.76
CLIP3Q96DZ5 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CLIP3Q96DZ5 UBE2L2-201ENST00000254302 429 ntBASIC4.05□□□□□ -1.76
CLIP3Q96DZ5 RNU6-1167P-201ENST00000363227 94 ntBASIC4.05□□□□□ -1.76
CLIP3Q96DZ5 Y_RNA.126-201ENST00000363382 111 ntBASIC4.05□□□□□ -1.76
CLIP3Q96DZ5 RNA5SP515-201ENST00000364570 118 ntBASIC4.05□□□□□ -1.76
CLIP3Q96DZ5 RNU6-702P-201ENST00000364982 107 ntBASIC4.05□□□□□ -1.76
CLIP3Q96DZ5 RNU6-310P-201ENST00000384655 107 ntBASIC4.05□□□□□ -1.76
CLIP3Q96DZ5 RNU6-328P-201ENST00000390887 106 ntBASIC4.05□□□□□ -1.76
CLIP3Q96DZ5 RNA5SP317-201ENST00000410176 116 ntBASIC4.05□□□□□ -1.76
CLIP3Q96DZ5 RNA5SP311-201ENST00000411290 116 ntBASIC4.05□□□□□ -1.76
CLIP3Q96DZ5 AC007919.1-201ENST00000429380 217 ntBASIC4.05□□□□□ -1.76
CLIP3Q96DZ5 AC005019.1-201ENST00000436455 431 ntBASIC4.05□□□□□ -1.76
CLIP3Q96DZ5 RPL23AP46-201ENST00000438548 490 ntBASIC4.05□□□□□ -1.76
CLIP3Q96DZ5 RPL23AP81-201ENST00000455252 467 ntBASIC4.05□□□□□ -1.76
CLIP3Q96DZ5 AL583843.1-201ENST00000456070 346 ntBASIC4.05□□□□□ -1.76
CLIP3Q96DZ5 MIR2053-201ENST00000459295 91 ntBASIC4.05□□□□□ -1.76
CLIP3Q96DZ5 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms