Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 OR6C66P-201ENST00000414917 930 ntBASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 RPL7P46-201ENST00000425129 740 ntBASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 AC097713.2-201ENST00000430199 356 ntBASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 GTF2IP20-201ENST00000431663 360 ntBASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 GPM6BP2-201ENST00000432046 144 ntBASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 SNRPEP4-201ENST00000435815 279 ntBASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 GPM6BP1-201ENST00000446387 144 ntBASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 SNRPFP3-201ENST00000457792 225 ntBASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 AC117522.3-201ENST00000507974 584 ntBASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 RNU6-914P-201ENST00000516749 109 ntBASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 AL133241.1-201ENST00000556832 487 ntBASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 BNIP3P30-201ENST00000601184 574 ntBASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 AP000907.4-201ENST00000604143 237 ntBASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 AL162713.1-201ENST00000604480 262 ntBASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 MIR8058-201ENST00000615737 89 ntBASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 AL512643.1-201ENST00000635735 524 ntBASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 NACAP2-201ENST00000318548 624 ntBASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 Y_RNA.38-201ENST00000362617 102 ntBASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 RNU6-534P-201ENST00000364877 106 ntBASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 RNU6-550P-201ENST00000391057 101 ntBASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 UBE2V1P2-201ENST00000397758 440 ntBASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 RNU6-908P-201ENST00000410160 94 ntBASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 RPS15AP6-201ENST00000420703 385 ntBASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 AC104058.1-201ENST00000448028 297 ntBASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 AL118520.1-201ENST00000450770 291 ntBASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 AC021205.2-201ENST00000480069 347 ntBASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 RNU6-1282P-201ENST00000516735 96 ntBASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 AC107934.2-201ENST00000518653 310 ntBASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 HIF1AP1-201ENST00000553642 175 ntBASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 AC037471.2-201ENST00000564941 598 ntBASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 AC008962.1-201ENST00000605729 304 ntBASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 MIR15A-201ENST00000607334 83 ntBASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 RMST_8.1-201ENST00000610287 165 ntBASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 AC096577.2-201ENST00000611455 153 ntBASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 DISC2.1-201ENST00000612827 205 ntBASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 AC024940.5-201ENST00000622889 474 ntBASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CHMP4CQ96CF2 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CHMP4CQ96CF2 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.09□□□□□ -1.75
CHMP4CQ96CF2 RNA5SP197-201ENST00000363357 119 ntBASIC4.09□□□□□ -1.75
CHMP4CQ96CF2 RNY3P3-201ENST00000363816 102 ntBASIC4.09□□□□□ -1.75
CHMP4CQ96CF2 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CHMP4CQ96CF2 SNORA1.3-201ENST00000384676 136 ntBASIC4.09□□□□□ -1.75
CHMP4CQ96CF2 RNU6-903P-201ENST00000391270 109 ntBASIC4.09□□□□□ -1.75
CHMP4CQ96CF2 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.09□□□□□ -1.75
CHMP4CQ96CF2 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.09□□□□□ -1.75
CHMP4CQ96CF2 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.09□□□□□ -1.75
CHMP4CQ96CF2 CYCSP4-201ENST00000429682 331 ntBASIC4.09□□□□□ -1.75
CHMP4CQ96CF2 MTND1P2-201ENST00000430604 821 ntBASIC4.09□□□□□ -1.75
CHMP4CQ96CF2 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.09□□□□□ -1.75
CHMP4CQ96CF2 NFU1P2-201ENST00000448700 469 ntBASIC4.09□□□□□ -1.75
CHMP4CQ96CF2 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.09□□□□□ -1.75
CHMP4CQ96CF2 EIF4EP3-201ENST00000498782 656 ntBASIC4.09□□□□□ -1.75
CHMP4CQ96CF2 FAM92A1P2-202ENST00000504766 877 ntBASIC4.09□□□□□ -1.75
CHMP4CQ96CF2 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.09□□□□□ -1.75
CHMP4CQ96CF2 AP005435.4-201ENST00000529514 284 ntBASIC4.09□□□□□ -1.75
CHMP4CQ96CF2 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.09□□□□□ -1.75
CHMP4CQ96CF2 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.09□□□□□ -1.75
CHMP4CQ96CF2 Z99571.1-201ENST00000636677 394 ntBASIC4.09□□□□□ -1.75
CHMP4CQ96CF2 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.09□□□□□ -1.75
CHMP4CQ96CF2 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
CHMP4CQ96CF2 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CHMP4CQ96CF2 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.09□□□□□ -1.76
CHMP4CQ96CF2 AL139276.1-201ENST00000311910 1001 ntBASIC4.08□□□□□ -1.76
CHMP4CQ96CF2 RNU1-75P-201ENST00000347264 129 ntBASIC4.08□□□□□ -1.76
CHMP4CQ96CF2 RNA5SP295-201ENST00000362655 121 ntBASIC4.08□□□□□ -1.76
CHMP4CQ96CF2 MIR34B-201ENST00000385076 84 ntBASIC4.08□□□□□ -1.76
CHMP4CQ96CF2 MIR301A-201ENST00000385261 86 ntBASIC4.08□□□□□ -1.76
CHMP4CQ96CF2 AL606923.1-201ENST00000406616 190 ntBASIC4.08□□□□□ -1.76
CHMP4CQ96CF2 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.08□□□□□ -1.76
CHMP4CQ96CF2 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.08□□□□□ -1.76
CHMP4CQ96CF2 ZNF863P-201ENST00000426746 417 ntBASIC4.08□□□□□ -1.76
CHMP4CQ96CF2 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.08□□□□□ -1.76
CHMP4CQ96CF2 HMGB3P11-201ENST00000440127 604 ntBASIC4.08□□□□□ -1.76
CHMP4CQ96CF2 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.08□□□□□ -1.76
CHMP4CQ96CF2 AC008264.1-201ENST00000447612 367 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms