Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 RPL23AP39-201ENST00000415533 405 ntBASIC1.92□□□□□ -2.1
LINC01560Q8TB33 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.92□□□□□ -2.1
LINC01560Q8TB33 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.92□□□□□ -2.1
LINC01560Q8TB33 TIMM9P1-201ENST00000436122 256 ntBASIC1.92□□□□□ -2.1
LINC01560Q8TB33 AL008629.1-201ENST00000438615 184 ntBASIC1.92□□□□□ -2.1
LINC01560Q8TB33 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.92□□□□□ -2.1
LINC01560Q8TB33 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.92□□□□□ -2.1
LINC01560Q8TB33 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.92□□□□□ -2.1
LINC01560Q8TB33 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.92□□□□□ -2.1
LINC01560Q8TB33 AC087588.1-201ENST00000462203 316 ntBASIC1.92□□□□□ -2.1
LINC01560Q8TB33 AIG1P1-201ENST00000503376 148 ntBASIC1.92□□□□□ -2.1
LINC01560Q8TB33 AC116337.1-201ENST00000509680 687 ntBASIC1.92□□□□□ -2.1
LINC01560Q8TB33 RNA5SP471-201ENST00000516971 106 ntBASIC1.92□□□□□ -2.1
LINC01560Q8TB33 RNA5SP290-201ENST00000517133 127 ntBASIC1.92□□□□□ -2.1
LINC01560Q8TB33 RN7SKP258-201ENST00000517151 304 ntBASIC1.92□□□□□ -2.1
LINC01560Q8TB33 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.92□□□□□ -2.1
LINC01560Q8TB33 AC123904.2-201ENST00000548059 300 ntBASIC1.92□□□□□ -2.1
LINC01560Q8TB33 AL356432.3-201ENST00000568952 465 ntBASIC1.92□□□□□ -2.1
LINC01560Q8TB33 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.92□□□□□ -2.1
LINC01560Q8TB33 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.92□□□□□ -2.1
LINC01560Q8TB33 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.92□□□□□ -2.1
LINC01560Q8TB33 AC239868.4-201ENST00000608318 671 ntBASIC1.92□□□□□ -2.1
LINC01560Q8TB33 UCA1.1-201ENST00000620952 75 ntBASIC1.92□□□□□ -2.1
LINC01560Q8TB33 MIR219B-201ENST00000637023 88 ntBASIC1.92□□□□□ -2.1
LINC01560Q8TB33 AP003399.1-201ENST00000637534 361 ntBASIC1.92□□□□□ -2.1
LINC01560Q8TB33 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.92□□□□□ -2.1
LINC01560Q8TB33 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
LINC01560Q8TB33 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LINC01560Q8TB33 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
LINC01560Q8TB33 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
LINC01560Q8TB33 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
LINC01560Q8TB33 Z82195.2-201ENST00000612348 18351 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
LINC01560Q8TB33 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
LINC01560Q8TB33 RNU1-105P-201ENST00000363470 161 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 MIR767-201ENST00000390228 109 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 RNA5SP354-201ENST00000391247 136 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 AL591416.1-201ENST00000404015 867 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.91□□□□□ -2.1
LINC01560Q8TB33 AC023141.4-201ENST00000412031 328 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.91□□□□□ -2.1
LINC01560Q8TB33 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.91□□□□□ -2.1
LINC01560Q8TB33 AC010099.3-201ENST00000423896 409 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 ELOCP14-201ENST00000428070 331 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 AC092427.1-202ENST00000430569 476 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 MTND1P28-201ENST00000435623 950 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 ELOCP7-201ENST00000439968 331 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 AC009296.1-201ENST00000443146 155 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 Z96811.1-201ENST00000445880 108 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.91□□□□□ -2.1
LINC01560Q8TB33 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.91□□□□□ -2.1
LINC01560Q8TB33 CECR9-201ENST00000453421 199 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 AC013267.1-201ENST00000458227 267 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.91□□□□□ -2.1
LINC01560Q8TB33 RPL31P41-201ENST00000477967 372 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 RPL23AP41-201ENST00000484754 458 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.91□□□□□ -2.1
LINC01560Q8TB33 AC114786.4-201ENST00000508771 728 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 AC114797.1-201ENST00000514003 728 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 AC116347.2-201ENST00000514912 523 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 RNU6-678P-201ENST00000516832 109 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 RNU6-1003P-201ENST00000517099 105 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.91□□□□□ -2.1
LINC01560Q8TB33 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.91□□□□□ -2.1
LINC01560Q8TB33 AC004486.1-201ENST00000546846 233 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.91□□□□□ -2.1
LINC01560Q8TB33 AC009094.1-201ENST00000564443 426 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.91□□□□□ -2.1
LINC01560Q8TB33 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.91□□□□□ -2.1
LINC01560Q8TB33 AC093424.1-201ENST00000604999 338 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 AC004805.2-201ENST00000605382 482 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.91□□□□□ -2.1
LINC01560Q8TB33 AC103710.1-201ENST00000610003 901 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 MIR6132-201ENST00000622083 109 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 AL356266.1-201ENST00000623311 483 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 AC017037.3-201ENST00000625016 472 ntBASIC1.91□□□□□ -2.1
LINC01560Q8TB33 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
LINC01560Q8TB33 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.91□□□□□ -2.1
LINC01560Q8TB33 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
LINC01560Q8TB33 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.91□□□□□ -2.1
LINC01560Q8TB33 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.1
LINC01560Q8TB33 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
LINC01560Q8TB33 AL356292.1-201ENST00000283110 373 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 RNU6-500P-201ENST00000362349 107 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 RNY4P24-201ENST00000362735 96 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 RNU6-1167P-201ENST00000363227 94 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 SNORA25.6-201ENST00000364121 118 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 Y_RNA.245-201ENST00000364493 95 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 RNU6-809P-201ENST00000384461 107 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 RNU6-278P-201ENST00000390945 109 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 MIR888-201ENST00000401186 77 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.9□□□□□ -2.11
LINC01560Q8TB33 RPS27AP14-201ENST00000422868 454 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 SKA2P1-201ENST00000425592 390 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 RPL37P21-201ENST00000435890 276 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 SNRPEP9-201ENST00000436794 238 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LINC01560Q8TB33 MTND5P2-201ENST00000442927 1142 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 UBBP3-201ENST00000445497 241 ntBASIC1.9□□□□□ -2.11
LINC01560Q8TB33 AC108059.3-201ENST00000456388 214 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 154.6 ms