Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC023825.1-201ENST00000566704 1030 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 HMGB1P49-201ENST00000418882 569 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AP000949.1-201ENST00000438328 629 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 RGS5-217ENST00000451759 835 ntTSL 3 BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC010099.1-201ENST00000455434 375 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 RPS27P26-201ENST00000494583 239 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC104229.1-201ENST00000561364 255 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC024595.1-201ENST00000623088 387 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC040168.1-201ENST00000623594 991 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 ICE2P2-201ENST00000483823 2787 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 MIR147B-201ENST00000390185 80 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 RPS3AP24-201ENST00000407896 734 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 RNU2-15P-201ENST00000410692 191 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 VN1R42P-201ENST00000424651 344 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 RPL31P35-201ENST00000431058 377 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 TRGVB-201ENST00000453257 471 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 ANKRD26P4-201ENST00000455755 950 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 MTCO3P44-201ENST00000510977 541 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC090666.1-201ENST00000578241 445 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 OR4K8P-201ENST00000578842 1048 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC097468.3-201ENST00000607956 456 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC107905.1-201ENST00000616204 426 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 SNORA3A-201ENST00000364113 130 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 Y_RNA.412-201ENST00000384001 104 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AL356867.1-201ENST00000429623 299 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 PTENP1-201ENST00000447117 1215 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 MTCYBP23-201ENST00000558717 1102 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 RPL7P27-201ENST00000403775 720 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 HMGB1P9-201ENST00000429856 646 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 PSPHP1-201ENST00000450062 261 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 SNRPFP4-201ENST00000456366 242 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 PMCHL2-203ENST00000457791 237 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 RPL30P5-201ENST00000494923 336 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC113420.1-201ENST00000507903 571 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 SNORA31.24-201ENST00000517232 57 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 MIR2909-201ENST00000617113 69 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC011330.2-201ENST00000621680 635 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC004808.1-201ENST00000627671 721 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 RNU6-543P-201ENST00000362576 108 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 SNORA46.1-201ENST00000391069 153 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC098614.2-201ENST00000426040 255 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 RPL23AP35-201ENST00000451906 501 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC112518.2-201ENST00000508565 425 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC098591.2-201ENST00000510152 315 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC008494.2-201ENST00000514544 370 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC090821.2-201ENST00000523552 176 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 MIR4529-201ENST00000578110 78 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 VN1R88P-201ENST00000596787 292 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC243960.4-201ENST00000600532 288 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AP000254.1-201ENST00000609934 520 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 RNU6-1151P-201ENST00000384684 107 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 RPL36P19-201ENST00000430744 301 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC114878.1-201ENST00000441166 358 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 TPRKBP1-201ENST00000456243 481 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 RPS3AP22-201ENST00000488297 769 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC004062.1-201ENST00000509926 645 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC022662.1-201ENST00000580252 331 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AL022067.1-201ENST00000602426 454 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AL355877.2-201ENST00000603670 358 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AP002826.1-201ENST00000608835 315 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC090617.9-201ENST00000623751 147 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 Clostridiales-1.3-201ENST00000637703 147 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 MIR7515-201ENST00000637837 67 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 MCTS2P-201ENST00000394552 546 ntBASIC0.4□□□□□ -2.34
SYNE1Q8NF91 U6atac.2-201ENST00000408644 118 ntBASIC0.4□□□□□ -2.34
SYNE1Q8NF91 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.4□□□□□ -2.34
SYNE1Q8NF91 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC0.4□□□□□ -2.34
SYNE1Q8NF91 RNU6-927P-201ENST00000516199 100 ntBASIC0.4□□□□□ -2.34
SYNE1Q8NF91 RNU6-551P-201ENST00000516661 103 ntBASIC0.4□□□□□ -2.34
SYNE1Q8NF91 AC105224.1-201ENST00000587055 421 ntBASIC0.4□□□□□ -2.34
SYNE1Q8NF91 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.4□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms