Protein–RNA interactions for Protein: Q8N6Y0

USHBP1, Usher syndrome type-1C protein-binding protein 1, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1Q8N6Y0 MIR128-1-201ENST00000384921 82 ntBASIC4.76□□□□□ -1.65
USHBP1Q8N6Y0 BX682237.1-201ENST00000415016 335 ntBASIC4.76□□□□□ -1.65
USHBP1Q8N6Y0 UBE2FP1-201ENST00000416536 447 ntBASIC4.76□□□□□ -1.65
USHBP1Q8N6Y0 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.76□□□□□ -1.65
USHBP1Q8N6Y0 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.76□□□□□ -1.65
USHBP1Q8N6Y0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.76□□□□□ -1.65
USHBP1Q8N6Y0 AC010655.1-201ENST00000449336 292 ntBASIC4.76□□□□□ -1.65
USHBP1Q8N6Y0 TRBV1-201ENST00000476502 284 ntBASIC4.76□□□□□ -1.65
USHBP1Q8N6Y0 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.76□□□□□ -1.65
USHBP1Q8N6Y0 AC005798.1-201ENST00000513715 387 ntBASIC4.76□□□□□ -1.65
USHBP1Q8N6Y0 RNU6-1213P-201ENST00000517075 94 ntBASIC4.76□□□□□ -1.65
USHBP1Q8N6Y0 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.76□□□□□ -1.65
USHBP1Q8N6Y0 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
USHBP1Q8N6Y0 CR383656.7-201ENST00000548164 174 ntBASIC4.76□□□□□ -1.65
USHBP1Q8N6Y0 MTCO3P23-201ENST00000561363 289 ntBASIC4.76□□□□□ -1.65
USHBP1Q8N6Y0 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.76□□□□□ -1.65
USHBP1Q8N6Y0 AL138889.2-201ENST00000603883 242 ntBASIC4.76□□□□□ -1.65
USHBP1Q8N6Y0 AL670379.4-201ENST00000605279 254 ntBASIC4.76□□□□□ -1.65
USHBP1Q8N6Y0 U2.17-201ENST00000611454 95 ntBASIC4.76□□□□□ -1.65
USHBP1Q8N6Y0 SNHG22-203ENST00000617833 660 ntBASIC4.76□□□□□ -1.65
USHBP1Q8N6Y0 Z69720.2-201ENST00000624755 279 ntBASIC4.76□□□□□ -1.65
USHBP1Q8N6Y0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.76□□□□□ -1.65
USHBP1Q8N6Y0 LINC02471-203ENST00000641941 4752 ntBASIC4.76□□□□□ -1.65
USHBP1Q8N6Y0 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.76□□□□□ -1.65
USHBP1Q8N6Y0 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 ZNF807-201ENST00000328088 1707 ntBASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 KPNA2P1-201ENST00000458289 1591 ntBASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 RNU6-946P-201ENST00000383878 107 ntBASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 Y_RNA.399-201ENST00000383955 105 ntBASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 RNU6-328P-201ENST00000390887 106 ntBASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 SNORD70.1-201ENST00000391007 85 ntBASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 NDUFB4P4-201ENST00000404822 243 ntBASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 Y_RNA.618-201ENST00000410949 107 ntBASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 AL731563.1-201ENST00000442202 214 ntBASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 BX276092.4-201ENST00000452056 248 ntBASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 AC015911.1-201ENST00000495111 156 ntBASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 RNU2-27P-201ENST00000516185 142 ntBASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 AC103783.1-201ENST00000520506 373 ntBASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 AC067852.4-201ENST00000590314 478 ntBASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 AL031176.1-201ENST00000604554 466 ntBASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 AC009570.1-201ENST00000609599 745 ntBASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 MIR6128-201ENST00000615528 109 ntBASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 MTND5P30-201ENST00000452896 1731 ntBASIC4.75□□□□□ -1.65
USHBP1Q8N6Y0 AL359893.1-201ENST00000447628 1580 ntBASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 AL137003.2-201ENST00000606924 2538 ntBASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 Y_RNA.47-201ENST00000362697 108 ntBASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 Y_RNA.252-201ENST00000364556 101 ntBASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 RNU6-339P-201ENST00000384310 107 ntBASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 RNU6-505P-201ENST00000384427 107 ntBASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 MT-TC-201ENST00000387405 66 ntBASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 MT-TG-201ENST00000387429 68 ntBASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 RNU4-65P-201ENST00000410473 140 ntBASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 AC114482.1-201ENST00000418010 247 ntBASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 NUP35P1-201ENST00000422734 947 ntBASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 ELOCP18-201ENST00000434209 337 ntBASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 U3.44-201ENST00000458938 192 ntBASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 MTATP8P1-201ENST00000467115 207 ntBASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 DYNLL1P5-201ENST00000467158 270 ntBASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 RNU6-123P-201ENST00000516163 102 ntBASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 RNU6-1016P-201ENST00000516689 94 ntBASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 RN7SKP82-201ENST00000516786 223 ntBASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 RN7SKP277-201ENST00000516895 283 ntBASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 AC090115.3-201ENST00000553218 849 ntBASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 ATP1B3P1-201ENST00000605365 821 ntBASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 PLCE1P1-201ENST00000622094 305 ntBASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 AC007792.1-201ENST00000623023 402 ntBASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
USHBP1Q8N6Y0 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms