Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 YPEL5P2-201ENST00000605553 359 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 AC068944.2-201ENST00000610373 403 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
BEST3Q8N1M1 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.08□□□□□ -1.92
BEST3Q8N1M1 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
BEST3Q8N1M1 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.08□□□□□ -1.92
BEST3Q8N1M1 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.08□□□□□ -1.92
BEST3Q8N1M1 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
BEST3Q8N1M1 TPTE2P4-201ENST00000258589 1605 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.08□□□□□ -1.92
BEST3Q8N1M1 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.07□□□□□ -1.92
BEST3Q8N1M1 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
BEST3Q8N1M1 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
BEST3Q8N1M1 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
BEST3Q8N1M1 AL049641.1-201ENST00000441055 1948 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 CKAP2P1-201ENST00000555477 2049 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
BEST3Q8N1M1 AC004972.1-201ENST00000623934 2209 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 RNU6-1287P-201ENST00000362914 107 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 Y_RNA.245-201ENST00000364493 95 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 Y_RNA.255-201ENST00000364581 97 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 SNORA69-201ENST00000383895 132 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 RNU6-1060P-201ENST00000384664 107 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 AL357075.1-201ENST00000404107 726 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
BEST3Q8N1M1 Z92545.1-201ENST00000411782 234 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.07□□□□□ -1.92
BEST3Q8N1M1 AC080125.1-201ENST00000414888 684 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.07□□□□□ -1.92
BEST3Q8N1M1 AL596276.1-201ENST00000434465 418 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 AC006028.1-201ENST00000438379 402 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.07□□□□□ -1.92
BEST3Q8N1M1 AC125238.1-201ENST00000448842 249 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.07□□□□□ -1.92
BEST3Q8N1M1 RN7SL504P-201ENST00000494496 287 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 AC110794.1-201ENST00000505816 425 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 RBBP4P6-201ENST00000508098 202 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 AC098591.2-201ENST00000510152 315 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 RN7SKP219-201ENST00000516825 296 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 RNU6-143P-201ENST00000516942 93 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 RNA5SP471-201ENST00000516971 106 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 RNU6-835P-201ENST00000516974 104 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 RNU6-685P-201ENST00000517088 95 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 RNA5SP290-201ENST00000517133 127 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 AC022690.1-201ENST00000526681 550 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.07□□□□□ -1.92
BEST3Q8N1M1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.07□□□□□ -1.92
BEST3Q8N1M1 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.07□□□□□ -1.92
BEST3Q8N1M1 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.07□□□□□ -1.92
BEST3Q8N1M1 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.07□□□□□ -1.92
BEST3Q8N1M1 MIR4703-201ENST00000577728 79 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 SNORA59B-202ENST00000578183 701 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.07□□□□□ -1.92
BEST3Q8N1M1 AC012493.2-201ENST00000595083 291 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
BEST3Q8N1M1 AC008945.2-201ENST00000606056 604 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 AC007014.2-201ENST00000615581 479 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 MIR8057-201ENST00000620957 69 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 AC027309.3-201ENST00000623419 351 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.07□□□□□ -1.92
BEST3Q8N1M1 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.07□□□□□ -1.92
BEST3Q8N1M1 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
BEST3Q8N1M1 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.07□□□□□ -1.92
BEST3Q8N1M1 ZNF826P-207ENST00000622273 1910 ntBASIC3.07□□□□□ -1.92
BEST3Q8N1M1 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.06□□□□□ -1.92
BEST3Q8N1M1 FAM35BP-202ENST00000497389 3337 ntBASIC3.06□□□□□ -1.92
BEST3Q8N1M1 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
BEST3Q8N1M1 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
BEST3Q8N1M1 AL139276.1-201ENST00000311910 1001 ntBASIC3.06□□□□□ -1.92
BEST3Q8N1M1 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
BEST3Q8N1M1 RNA5SP295-201ENST00000362655 121 ntBASIC3.06□□□□□ -1.92
BEST3Q8N1M1 RNU6-1090P-201ENST00000364065 94 ntBASIC3.06□□□□□ -1.92
BEST3Q8N1M1 RNU6-512P-201ENST00000364438 103 ntBASIC3.06□□□□□ -1.92
BEST3Q8N1M1 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
BEST3Q8N1M1 SNORA1.3-201ENST00000384676 136 ntBASIC3.06□□□□□ -1.92
BEST3Q8N1M1 MIR325-201ENST00000385260 98 ntBASIC3.06□□□□□ -1.92
BEST3Q8N1M1 MIR1277-201ENST00000408536 78 ntBASIC3.06□□□□□ -1.92
BEST3Q8N1M1 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
BEST3Q8N1M1 AC092809.3-201ENST00000415453 231 ntBASIC3.06□□□□□ -1.92
BEST3Q8N1M1 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.06□□□□□ -1.92
BEST3Q8N1M1 AC092047.1-201ENST00000424997 240 ntBASIC3.06□□□□□ -1.92
BEST3Q8N1M1 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.06□□□□□ -1.92
BEST3Q8N1M1 AC000111.3-201ENST00000433478 193 ntBASIC3.06□□□□□ -1.92
BEST3Q8N1M1 AL512844.2-201ENST00000433990 593 ntBASIC3.06□□□□□ -1.92
BEST3Q8N1M1 SEPT14P3-201ENST00000439401 183 ntBASIC3.06□□□□□ -1.92
BEST3Q8N1M1 AL732372.2-207ENST00000445840 183 ntBASIC3.06□□□□□ -1.92
BEST3Q8N1M1 AC008264.1-201ENST00000447612 367 ntBASIC3.06□□□□□ -1.92
BEST3Q8N1M1 AC073415.1-201ENST00000449240 153 ntBASIC3.06□□□□□ -1.92
BEST3Q8N1M1 ELOCP23-201ENST00000452014 332 ntBASIC3.06□□□□□ -1.92
BEST3Q8N1M1 SEPT14P2-201ENST00000453405 183 ntBASIC3.06□□□□□ -1.92
BEST3Q8N1M1 CACYBPP2-201ENST00000453625 678 ntBASIC3.06□□□□□ -1.92
BEST3Q8N1M1 AL162395.1-201ENST00000457882 422 ntBASIC3.06□□□□□ -1.92
BEST3Q8N1M1 RPL23AP67-201ENST00000465341 474 ntBASIC3.06□□□□□ -1.92
BEST3Q8N1M1 RPL7P5-201ENST00000471472 736 ntBASIC3.06□□□□□ -1.92
BEST3Q8N1M1 AC233702.1-201ENST00000482905 502 ntBASIC3.06□□□□□ -1.92
BEST3Q8N1M1 SEPT14P4-201ENST00000513445 186 ntBASIC3.06□□□□□ -1.92
BEST3Q8N1M1 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.06□□□□□ -1.92
BEST3Q8N1M1 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.06□□□□□ -1.92
BEST3Q8N1M1 FO082796.1-201ENST00000523795 183 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms