Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 Y_RNA.149-201ENST00000363558 117 ntBASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 Y_RNA.193-201ENST00000363979 102 ntBASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 RNU6-450P-201ENST00000364654 107 ntBASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 Y_RNA.401-201ENST00000383965 117 ntBASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 Y_RNA.452-201ENST00000384202 108 ntBASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 Y_RNA.455-201ENST00000384230 98 ntBASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 RNU6-790P-201ENST00000384479 105 ntBASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 RNA5SP317-201ENST00000410176 116 ntBASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 RNA5SP39-201ENST00000411245 120 ntBASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 RNA5SP311-201ENST00000411290 116 ntBASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 RPL17P36-201ENST00000420302 549 ntBASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 RPS15AP6-201ENST00000420703 385 ntBASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 BX276092.3-201ENST00000424182 230 ntBASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 RPS24P13-201ENST00000442520 397 ntBASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 ABCF2P2-201ENST00000450549 296 ntBASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 FTH1P2-201ENST00000466086 412 ntBASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 AC104164.2-201ENST00000496953 495 ntBASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 AC008716.1-201ENST00000511084 513 ntBASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 RNA5SP315-201ENST00000516340 116 ntBASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 RNA5SP312-201ENST00000517068 116 ntBASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 RNU6-1315P-201ENST00000517187 99 ntBASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 AC110588.1-201ENST00000559699 137 ntBASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 AC022655.2-201ENST00000577280 318 ntBASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 VN1R107P-201ENST00000601784 209 ntBASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 AL160281.1-201ENST00000605307 311 ntBASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 Z69720.2-201ENST00000624755 279 ntBASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM48Q8IWZ4 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
TRIM48Q8IWZ4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 RNU6-238P-201ENST00000363313 106 ntBASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 Y_RNA.153-201ENST00000363615 91 ntBASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 RNU6-335P-201ENST00000364563 113 ntBASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 RNA5SP479-201ENST00000364858 117 ntBASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 Y_RNA.389-201ENST00000383924 113 ntBASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 RN7SKP167-201ENST00000411047 285 ntBASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 AC006946.1-201ENST00000429106 328 ntBASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 AL451050.1-201ENST00000450126 415 ntBASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 RN7SL604P-201ENST00000492589 296 ntBASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 AC025445.1-201ENST00000502728 300 ntBASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 VWA8P1-201ENST00000510889 176 ntBASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 RN7SKP21-201ENST00000516503 220 ntBASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 AC023442.1-201ENST00000531247 422 ntBASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 TRAV37-201ENST00000553906 342 ntBASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 HMGB3P26-201ENST00000560051 582 ntBASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 AC005592.1-201ENST00000566527 1640 ntBASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 MIR1273C-201ENST00000578669 77 ntBASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 AC018889.1-201ENST00000605372 397 ntBASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM48Q8IWZ4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 NCAPGP1-201ENST00000505112 1814 ntBASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 RNU1-15P-201ENST00000353977 144 ntBASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 RNA5SP513-201ENST00000364648 118 ntBASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 RNU1-13P-201ENST00000384499 162 ntBASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 RNU6-1025P-201ENST00000410629 104 ntBASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 AL030996.1-201ENST00000411430 235 ntBASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 DPH3P2-201ENST00000422618 250 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms