Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SNORA11F-201ENST00000408237 128 ntBASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 YPEL5P1-201ENST00000419731 367 ntBASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 AC008571.1-201ENST00000467232 300 ntBASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 AL132838.2-201ENST00000492041 314 ntBASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 RPL22P13-201ENST00000493291 347 ntBASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 AC114801.2-201ENST00000503825 781 ntBASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 AC022493.2-201ENST00000506122 481 ntBASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 AC116655.1-201ENST00000508324 901 ntBASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 TRAV8-5-201ENST00000537369 341 ntBASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 AC091516.1-201ENST00000549191 703 ntBASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 AC109446.1-201ENST00000566172 220 ntBASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 AC011494.1-201ENST00000596454 237 ntBASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 AC123912.5-201ENST00000605470 343 ntBASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 FTX_3.1-201ENST00000610451 147 ntBASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 AL110115.1-201ENST00000614396 364 ntBASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 MTND5P27-201ENST00000428871 1720 ntBASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 FTLP6-201ENST00000355274 422 ntBASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 RHOT1P2-201ENST00000366423 333 ntBASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 MIR3065-201ENST00000390137 79 ntBASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 RNU6-823P-201ENST00000391042 103 ntBASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 SNORA48.7-201ENST00000391302 135 ntBASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 RNU6-101P-201ENST00000410323 104 ntBASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 AC124916.1-201ENST00000444020 547 ntBASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 MTATP6P7-201ENST00000453315 681 ntBASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 SLC25A15P5-201ENST00000508033 253 ntBASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 SCARNA16.2-201ENST00000516520 172 ntBASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 RNA5SP384-201ENST00000516615 116 ntBASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 GNAI2P1-201ENST00000541815 315 ntBASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 AC011602.1-201ENST00000546484 331 ntBASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 HMGB1P14-201ENST00000557424 591 ntBASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 BPIFA4P-203ENST00000603168 689 ntBASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 AC079587.1-201ENST00000603846 277 ntBASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 MIR6891-201ENST00000618788 93 ntBASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NPAS4Q8IUM7 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 AC007685.1-201ENST00000329806 452 ntBASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 MIR134-201ENST00000385258 73 ntBASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 RNU6-325P-201ENST00000411132 105 ntBASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 HSPE1P12-201ENST00000412576 301 ntBASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 SNORD56-201ENST00000413522 71 ntBASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 ARL5AP4-201ENST00000430731 512 ntBASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 AL133396.1-201ENST00000432048 687 ntBASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 HMGB3P8-201ENST00000449709 577 ntBASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 RNU6-513P-201ENST00000516104 104 ntBASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 CASP1P1-201ENST00000526345 212 ntBASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 AL121917.1-203ENST00000605534 577 ntBASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 AL161629.2-201ENST00000615347 275 ntBASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 AP001642.1-201ENST00000624727 2117 ntBASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms