Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 Z83843.1-201ENST00000604070 3685 ntBASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 AC017071.1-201ENST00000564407 2204 ntBASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 ADAM3A-203ENST00000461344 2157 ntBASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 RNU6-116P-201ENST00000384042 109 ntBASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 RNU6-550P-201ENST00000391057 101 ntBASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 RPL5P18-201ENST00000406671 891 ntBASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 AC126124.2-201ENST00000413542 321 ntBASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 MTCO3P30-201ENST00000426425 670 ntBASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 PSPHP1-201ENST00000450062 261 ntBASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 AC027673.1-201ENST00000456245 405 ntBASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 GMFBP1-201ENST00000467831 427 ntBASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 AC082651.2-201ENST00000496833 166 ntBASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 AC105417.1-201ENST00000514691 285 ntBASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 AP001893.2-201ENST00000526949 202 ntBASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 MIR5692A1-201ENST00000580523 69 ntBASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 DEFB131E-202ENST00000602581 683 ntBASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 AC013562.2-201ENST00000611632 603 ntBASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 AC139792.3-201ENST00000623525 224 ntBASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 AC124864.2-201ENST00000624736 186 ntBASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 MIR3199-2-201ENST00000636243 86 ntBASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.31□□□□□ -1.88
LRRTM4Q86VH4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 AP003122.5-201ENST00000527668 3766 ntBASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 MTND5P1-201ENST00000445440 1375 ntBASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 MTCO3P40-201ENST00000392516 676 ntBASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 RPL7P46-201ENST00000425129 740 ntBASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 TIMM9P3-201ENST00000428659 274 ntBASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 AC006946.1-201ENST00000429106 328 ntBASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 GTF2IP20-201ENST00000431663 360 ntBASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 MTND1P34-201ENST00000438556 671 ntBASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 RPL21P13-201ENST00000488305 481 ntBASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 RNU6-720P-201ENST00000516363 108 ntBASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 RNU6-1183P-201ENST00000517054 60 ntBASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 AC010653.1-201ENST00000571108 881 ntBASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 AC015917.1-201ENST00000579654 510 ntBASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 BNIP3P22-201ENST00000593399 556 ntBASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 AC017083.3-201ENST00000609955 700 ntBASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 U6.42-201ENST00000618440 107 ntBASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 AL356321.1-201ENST00000621360 228 ntBASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 AL359880.1-201ENST00000621879 266 ntBASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRRTM4Q86VH4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 AC093908.1-201ENST00000623125 8092 ntBASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 AC007496.3-201ENST00000624987 3443 ntBASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 OR4G2P-201ENST00000328113 903 ntBASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 MIR412-201ENST00000362142 91 ntBASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 MIR208A-201ENST00000362287 71 ntBASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 Y_RNA.481-201ENST00000384373 102 ntBASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 U3.19-201ENST00000390893 196 ntBASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 SNORA40C-201ENST00000391285 128 ntBASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 AL139039.1-201ENST00000401900 692 ntBASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 RNU2-29P-201ENST00000410423 189 ntBASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 RNU2-49P-201ENST00000410666 184 ntBASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 MRPS31P2-201ENST00000451581 518 ntBASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 RPS4XP2-201ENST00000458402 793 ntBASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 RPL21P41-201ENST00000459863 264 ntBASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 CENPBD1P1-201ENST00000464061 469 ntBASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 SRRM1P2-201ENST00000464531 1192 ntBASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 EIF1P4-201ENST00000572664 335 ntBASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 AC007179.3-201ENST00000604976 235 ntBASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRTM4Q86VH4 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms