Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.06□□□□□ -1.6
PRPF40BQ6NWY9 ERHP1-201ENST00000523006 310 ntBASIC5.06□□□□□ -1.6
PRPF40BQ6NWY9 AP000889.1-201ENST00000530968 660 ntBASIC5.06□□□□□ -1.6
PRPF40BQ6NWY9 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.06□□□□□ -1.6
PRPF40BQ6NWY9 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.06□□□□□ -1.6
PRPF40BQ6NWY9 RPL23AP87-202ENST00000573039 466 ntBASIC5.06□□□□□ -1.6
PRPF40BQ6NWY9 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.06□□□□□ -1.6
PRPF40BQ6NWY9 MIR3200-201ENST00000580767 85 ntBASIC5.06□□□□□ -1.6
PRPF40BQ6NWY9 MIR5684-201ENST00000585074 65 ntBASIC5.06□□□□□ -1.6
PRPF40BQ6NWY9 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PRPF40BQ6NWY9 MIR432-201ENST00000606207 94 ntBASIC5.06□□□□□ -1.6
PRPF40BQ6NWY9 MIR15A-201ENST00000607334 83 ntBASIC5.06□□□□□ -1.6
PRPF40BQ6NWY9 AC096577.2-201ENST00000611455 153 ntBASIC5.06□□□□□ -1.6
PRPF40BQ6NWY9 NAA50-211ENST00000630058 177 ntTSL 5 BASIC5.06□□□□□ -1.6
PRPF40BQ6NWY9 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.06□□□□□ -1.6
PRPF40BQ6NWY9 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 RNA5SP52-201ENST00000362448 134 ntBASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 RNU6-1059P-201ENST00000363752 98 ntBASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 SET-203ENST00000372688 801 ntTSL 2 BASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 SNORA5A-201ENST00000384111 134 ntBASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 Y_RNA.476-201ENST00000384347 108 ntBASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 MIR517A-201ENST00000385001 87 ntBASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 MT-TG-201ENST00000387429 68 ntBASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 RNU6-882P-201ENST00000391025 103 ntBASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 RPL21P90-201ENST00000415692 466 ntBASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 AC092436.3-201ENST00000511788 257 ntBASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 RNU6-120P-201ENST00000516077 103 ntBASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 RNU1-95P-201ENST00000516357 160 ntBASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 SNORA74D-201ENST00000516404 141 ntBASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 RNU1-128P-201ENST00000516704 160 ntBASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 AC091516.1-201ENST00000549191 703 ntBASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 SNORD84-203ENST00000584275 78 ntBASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 BDH2P1-201ENST00000602288 736 ntBASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 NUTF2P8-201ENST00000604593 363 ntBASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 AC011373.1-201ENST00000607270 237 ntBASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 AL034408.1-202ENST00000636088 415 ntBASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PRPF40BQ6NWY9 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PRPF40BQ6NWY9 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.04□□□□□ -1.6
PRPF40BQ6NWY9 PRO1804-201ENST00000623780 2050 ntBASIC5.04□□□□□ -1.6
PRPF40BQ6NWY9 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF40BQ6NWY9 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
PRPF40BQ6NWY9 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF40BQ6NWY9 Y_RNA.39-201ENST00000362620 98 ntBASIC5.04□□□□□ -1.6
PRPF40BQ6NWY9 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PRPF40BQ6NWY9 EIF4EP1-201ENST00000422311 642 ntBASIC5.04□□□□□ -1.6
PRPF40BQ6NWY9 AL645568.3-201ENST00000433683 316 ntBASIC5.04□□□□□ -1.6
PRPF40BQ6NWY9 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.04□□□□□ -1.6
PRPF40BQ6NWY9 AC099799.1-201ENST00000439809 192 ntBASIC5.04□□□□□ -1.6
PRPF40BQ6NWY9 U8.20-201ENST00000459445 131 ntBASIC5.04□□□□□ -1.6
PRPF40BQ6NWY9 AC018437.1-201ENST00000492214 406 ntBASIC5.04□□□□□ -1.6
PRPF40BQ6NWY9 RN7SL323P-201ENST00000494712 295 ntBASIC5.04□□□□□ -1.6
PRPF40BQ6NWY9 AC009901.1-201ENST00000506703 541 ntBASIC5.04□□□□□ -1.6
PRPF40BQ6NWY9 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.04□□□□□ -1.6
PRPF40BQ6NWY9 RNU4-60P-201ENST00000517239 135 ntBASIC5.04□□□□□ -1.6
PRPF40BQ6NWY9 AC104576.1-201ENST00000524225 88 ntBASIC5.04□□□□□ -1.6
PRPF40BQ6NWY9 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.04□□□□□ -1.6
PRPF40BQ6NWY9 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.04□□□□□ -1.6
PRPF40BQ6NWY9 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.04□□□□□ -1.6
PRPF40BQ6NWY9 AC109446.1-201ENST00000566172 220 ntBASIC5.04□□□□□ -1.6
PRPF40BQ6NWY9 MYL12BP1-201ENST00000569826 507 ntBASIC5.04□□□□□ -1.6
PRPF40BQ6NWY9 ELOCP5-201ENST00000604924 333 ntBASIC5.04□□□□□ -1.6
PRPF40BQ6NWY9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PRPF40BQ6NWY9 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PRPF40BQ6NWY9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PRPF40BQ6NWY9 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
PRPF40BQ6NWY9 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF40BQ6NWY9 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
PRPF40BQ6NWY9 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.03□□□□□ -1.6
PRPF40BQ6NWY9 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.03□□□□□ -1.6
PRPF40BQ6NWY9 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF40BQ6NWY9 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.03□□□□□ -1.6
PRPF40BQ6NWY9 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF40BQ6NWY9 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF40BQ6NWY9 SNORA60-201ENST00000362396 134 ntBASIC5.03□□□□□ -1.6
PRPF40BQ6NWY9 Y_RNA.153-201ENST00000363615 91 ntBASIC5.03□□□□□ -1.6
PRPF40BQ6NWY9 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PRPF40BQ6NWY9 RNU6-76P-201ENST00000384060 104 ntBASIC5.03□□□□□ -1.6
PRPF40BQ6NWY9 RNU6-1222P-201ENST00000384615 107 ntBASIC5.03□□□□□ -1.6
PRPF40BQ6NWY9 MIR491-201ENST00000384877 84 ntBASIC5.03□□□□□ -1.6
PRPF40BQ6NWY9 RN7SKP58-201ENST00000411010 305 ntBASIC5.03□□□□□ -1.6
PRPF40BQ6NWY9 AC096664.2-201ENST00000411843 406 ntBASIC5.03□□□□□ -1.6
PRPF40BQ6NWY9 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.03□□□□□ -1.6
PRPF40BQ6NWY9 CECR9-201ENST00000453421 199 ntBASIC5.03□□□□□ -1.6
PRPF40BQ6NWY9 RNU7-187P-201ENST00000458985 68 ntBASIC5.03□□□□□ -1.6
PRPF40BQ6NWY9 AC009812.2-201ENST00000517657 457 ntBASIC5.03□□□□□ -1.6
PRPF40BQ6NWY9 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.03□□□□□ -1.6
PRPF40BQ6NWY9 CYCSP30-201ENST00000546447 172 ntBASIC5.03□□□□□ -1.6
PRPF40BQ6NWY9 RNU6-85P-201ENST00000605989 107 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms