Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.17□□□□□ -2.06
RFX4Q33E94 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.17□□□□□ -2.06
RFX4Q33E94 RNU7-26P-201ENST00000458980 63 ntBASIC2.17□□□□□ -2.06
RFX4Q33E94 AC107626.1-201ENST00000471084 183 ntBASIC2.17□□□□□ -2.06
RFX4Q33E94 AC004263.1-201ENST00000479327 332 ntBASIC2.17□□□□□ -2.06
RFX4Q33E94 AC096576.1-201ENST00000489014 359 ntBASIC2.17□□□□□ -2.06
RFX4Q33E94 AC090255.1-201ENST00000495779 349 ntBASIC2.17□□□□□ -2.06
RFX4Q33E94 NDUFB4P2-201ENST00000509515 391 ntBASIC2.17□□□□□ -2.06
RFX4Q33E94 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.17□□□□□ -2.06
RFX4Q33E94 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.17□□□□□ -2.06
RFX4Q33E94 RNA5SP356-201ENST00000515972 94 ntBASIC2.17□□□□□ -2.06
RFX4Q33E94 SNORA31.3-201ENST00000516029 96 ntBASIC2.17□□□□□ -2.06
RFX4Q33E94 RNU6-201P-201ENST00000517100 61 ntBASIC2.17□□□□□ -2.06
RFX4Q33E94 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.17□□□□□ -2.06
RFX4Q33E94 AC107934.1-201ENST00000522215 217 ntBASIC2.17□□□□□ -2.06
RFX4Q33E94 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.17□□□□□ -2.06
RFX4Q33E94 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
RFX4Q33E94 AC008015.1-201ENST00000555505 465 ntBASIC2.17□□□□□ -2.06
RFX4Q33E94 AC012435.1-202ENST00000568772 240 ntBASIC2.17□□□□□ -2.06
RFX4Q33E94 MIR4319-201ENST00000577285 85 ntBASIC2.17□□□□□ -2.06
RFX4Q33E94 MIR3146-201ENST00000580367 79 ntBASIC2.17□□□□□ -2.06
RFX4Q33E94 MIR5694-201ENST00000581190 76 ntBASIC2.17□□□□□ -2.06
RFX4Q33E94 AP000860.1-201ENST00000605250 559 ntBASIC2.17□□□□□ -2.06
RFX4Q33E94 AC105129.3-201ENST00000605455 485 ntBASIC2.17□□□□□ -2.06
RFX4Q33E94 AL355816.2-201ENST00000610049 647 ntBASIC2.17□□□□□ -2.06
RFX4Q33E94 AL360219.1-201ENST00000610230 366 ntBASIC2.17□□□□□ -2.06
RFX4Q33E94 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.17□□□□□ -2.06
RFX4Q33E94 MIR1291-201ENST00000627649 87 ntBASIC2.17□□□□□ -2.06
RFX4Q33E94 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RFX4Q33E94 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RFX4Q33E94 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.16□□□□□ -2.06
RFX4Q33E94 AP000568.1-201ENST00000282964 442 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 AC062016.1-201ENST00000355719 319 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 RNY4P24-201ENST00000362735 96 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 RNU6-884P-201ENST00000363889 107 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 RNU6-14P-201ENST00000384630 106 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 MIR196B-201ENST00000384852 84 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 AL359511.1-201ENST00000402970 211 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 MTCYBP36-201ENST00000404146 440 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 RNA5SP184-201ENST00000411071 108 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 AC023141.4-201ENST00000412031 328 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.16□□□□□ -2.06
RFX4Q33E94 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.16□□□□□ -2.06
RFX4Q33E94 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.16□□□□□ -2.06
RFX4Q33E94 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.16□□□□□ -2.06
RFX4Q33E94 MORF4L1P6-201ENST00000418771 268 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 AL353777.1-201ENST00000425552 326 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.16□□□□□ -2.06
RFX4Q33E94 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.16□□□□□ -2.06
RFX4Q33E94 MTND1P28-201ENST00000435623 950 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.16□□□□□ -2.06
RFX4Q33E94 IFNA11P-201ENST00000446352 526 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.16□□□□□ -2.06
RFX4Q33E94 CECR9-201ENST00000453421 199 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 AC108059.3-201ENST00000456388 214 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
RFX4Q33E94 AL160314.1-201ENST00000490836 438 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 RPF2P2-201ENST00000504693 896 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 MRPS33P3-201ENST00000513456 322 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.16□□□□□ -2.06
RFX4Q33E94 RNU6-759P-201ENST00000516740 103 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 RNA5SP290-201ENST00000517133 127 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 RNA5SP291-201ENST00000517222 105 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 AC022616.6-201ENST00000520479 119 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RFX4Q33E94 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.16□□□□□ -2.06
RFX4Q33E94 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 ARL2BPP2-201ENST00000550907 489 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.16□□□□□ -2.06
RFX4Q33E94 PCMTD1P2-201ENST00000565017 355 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.16□□□□□ -2.06
RFX4Q33E94 MIR5697-201ENST00000578045 78 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.16□□□□□ -2.06
RFX4Q33E94 AC090616.2-202ENST00000584248 222 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 AC005498.1-201ENST00000592125 465 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 WISP1-OT1-201ENST00000602893 642 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 AL356280.1-201ENST00000603614 379 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 AC098826.3-201ENST00000603823 466 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 AL161798.1-201ENST00000604630 131 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 AC245884.12-201ENST00000615364 59 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 MIR7844-201ENST00000616161 122 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 AC091953.2-201ENST00000623979 160 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 AC068057.2-201ENST00000624047 895 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.16□□□□□ -2.06
RFX4Q33E94 AC093591.3-201ENST00000634516 308 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 CU459211.1-201ENST00000635667 749 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 AP003399.1-201ENST00000637534 361 ntBASIC2.16□□□□□ -2.06
RFX4Q33E94 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RFX4Q33E94 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
RFX4Q33E94 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
RFX4Q33E94 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
RFX4Q33E94 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
RFX4Q33E94 RNU6-1167P-201ENST00000363227 94 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 RNU6-1284P-201ENST00000363701 100 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 RNY4P16-201ENST00000364768 94 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 RNY3P13-201ENST00000365542 102 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 RNU6-533P-201ENST00000384144 107 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 RNU6-301P-201ENST00000384277 107 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 MIR518C-201ENST00000384822 101 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms