Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 AC093536.2-201ENST00000565257 1406 ntBASIC3.23□□□□□ -1.89
CALD1Q05682 AC145350.1-201ENST00000567426 208 ntBASIC3.23□□□□□ -1.89
CALD1Q05682 AC109446.2-201ENST00000567872 497 ntBASIC3.23□□□□□ -1.89
CALD1Q05682 ROCK1P1-201ENST00000573767 549 ntBASIC3.23□□□□□ -1.89
CALD1Q05682 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.23□□□□□ -1.89
CALD1Q05682 AC079416.3-201ENST00000624479 549 ntBASIC3.23□□□□□ -1.89
CALD1Q05682 AC007494.3-201ENST00000624660 743 ntBASIC3.23□□□□□ -1.89
CALD1Q05682 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CALD1Q05682 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
CALD1Q05682 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CALD1Q05682 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.22□□□□□ -1.89
CALD1Q05682 UBE2L2-201ENST00000254302 429 ntBASIC3.22□□□□□ -1.89
CALD1Q05682 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CALD1Q05682 RNU1-105P-201ENST00000363470 161 ntBASIC3.22□□□□□ -1.89
CALD1Q05682 AL031577.2-201ENST00000404133 280 ntBASIC3.22□□□□□ -1.89
CALD1Q05682 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.22□□□□□ -1.89
CALD1Q05682 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.22□□□□□ -1.89
CALD1Q05682 AL513328.1-201ENST00000446460 224 ntBASIC3.22□□□□□ -1.89
CALD1Q05682 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.22□□□□□ -1.89
CALD1Q05682 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.22□□□□□ -1.89
CALD1Q05682 RPL26P9-201ENST00000457466 433 ntBASIC3.22□□□□□ -1.89
CALD1Q05682 RPL36AP51-201ENST00000487216 318 ntBASIC3.22□□□□□ -1.89
CALD1Q05682 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.22□□□□□ -1.89
CALD1Q05682 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.22□□□□□ -1.89
CALD1Q05682 AC114786.4-201ENST00000508771 728 ntBASIC3.22□□□□□ -1.89
CALD1Q05682 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.22□□□□□ -1.89
CALD1Q05682 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CALD1Q05682 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.22□□□□□ -1.89
CALD1Q05682 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.22□□□□□ -1.89
CALD1Q05682 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.22□□□□□ -1.89
CALD1Q05682 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
CALD1Q05682 AC020895.1-201ENST00000595362 272 ntBASIC3.22□□□□□ -1.89
CALD1Q05682 AC008498.1-201ENST00000613012 531 ntBASIC3.22□□□□□ -1.89
CALD1Q05682 AC034102.8-201ENST00000615146 484 ntBASIC3.22□□□□□ -1.89
CALD1Q05682 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.22□□□□□ -1.89
CALD1Q05682 UCA1.1-201ENST00000620952 75 ntBASIC3.22□□□□□ -1.89
CALD1Q05682 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CALD1Q05682 AC008669.1-201ENST00000565823 2178 ntBASIC3.22□□□□□ -1.89
CALD1Q05682 AC016717.2-201ENST00000609089 5141 ntBASIC3.22□□□□□ -1.89
CALD1Q05682 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CALD1Q05682 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.21□□□□□ -1.9
CALD1Q05682 Y_RNA.500-201ENST00000384466 111 ntBASIC3.21□□□□□ -1.9
CALD1Q05682 SNORA41-201ENST00000384675 132 ntBASIC3.21□□□□□ -1.9
CALD1Q05682 SNORA80E-201ENST00000384744 137 ntBASIC3.21□□□□□ -1.9
CALD1Q05682 AL356057.2-201ENST00000403318 432 ntBASIC3.21□□□□□ -1.9
CALD1Q05682 RNA5SP181-201ENST00000410246 98 ntBASIC3.21□□□□□ -1.9
CALD1Q05682 RNU2-62P-201ENST00000410868 191 ntBASIC3.21□□□□□ -1.9
CALD1Q05682 AL365203.2-201ENST00000423444 196 ntBASIC3.21□□□□□ -1.9
CALD1Q05682 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CALD1Q05682 AC104651.1-201ENST00000427559 735 ntBASIC3.21□□□□□ -1.9
CALD1Q05682 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.21□□□□□ -1.9
CALD1Q05682 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.21□□□□□ -1.9
CALD1Q05682 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CALD1Q05682 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.21□□□□□ -1.9
CALD1Q05682 AC010486.2-201ENST00000505572 483 ntBASIC3.21□□□□□ -1.9
CALD1Q05682 MTND1P22-201ENST00000510572 951 ntBASIC3.21□□□□□ -1.9
CALD1Q05682 SNORA31.3-201ENST00000516029 96 ntBASIC3.21□□□□□ -1.9
CALD1Q05682 RNA5SP165-201ENST00000517142 115 ntBASIC3.21□□□□□ -1.9
CALD1Q05682 AC106038.2-201ENST00000520706 568 ntBASIC3.21□□□□□ -1.9
CALD1Q05682 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CALD1Q05682 AP001646.1-201ENST00000527936 915 ntBASIC3.21□□□□□ -1.9
CALD1Q05682 AP003181.2-201ENST00000528941 181 ntBASIC3.21□□□□□ -1.9
CALD1Q05682 DUXAP5-201ENST00000529668 529 ntBASIC3.21□□□□□ -1.9
CALD1Q05682 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.21□□□□□ -1.9
CALD1Q05682 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.21□□□□□ -1.9
CALD1Q05682 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.21□□□□□ -1.9
CALD1Q05682 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.21□□□□□ -1.9
CALD1Q05682 AL158211.1-201ENST00000566763 763 ntBASIC3.21□□□□□ -1.9
CALD1Q05682 MIR548AB-201ENST00000584917 84 ntBASIC3.21□□□□□ -1.9
CALD1Q05682 AC060766.3-201ENST00000591442 263 ntBASIC3.21□□□□□ -1.9
CALD1Q05682 AC103710.2-201ENST00000609912 942 ntBASIC3.21□□□□□ -1.9
CALD1Q05682 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.21□□□□□ -1.9
CALD1Q05682 AP003399.1-201ENST00000637534 361 ntBASIC3.21□□□□□ -1.9
CALD1Q05682 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
CALD1Q05682 AC026241.1-201ENST00000517873 2142 ntBASIC3.2□□□□□ -1.9
CALD1Q05682 AC099654.7-201ENST00000635788 2127 ntBASIC3.2□□□□□ -1.9
CALD1Q05682 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.2□□□□□ -1.9
CALD1Q05682 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CALD1Q05682 RNU6-511P-201ENST00000363496 107 ntBASIC3.2□□□□□ -1.9
CALD1Q05682 RNU5E-5P-201ENST00000365379 116 ntBASIC3.2□□□□□ -1.9
CALD1Q05682 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CALD1Q05682 SNORD115.1-201ENST00000391109 76 ntBASIC3.2□□□□□ -1.9
CALD1Q05682 MIR888-201ENST00000401186 77 ntBASIC3.2□□□□□ -1.9
CALD1Q05682 AL162578.1-201ENST00000406202 378 ntBASIC3.2□□□□□ -1.9
CALD1Q05682 RPS4XP7-201ENST00000406274 780 ntBASIC3.2□□□□□ -1.9
CALD1Q05682 FCF1P10-201ENST00000407590 479 ntBASIC3.2□□□□□ -1.9
CALD1Q05682 Y_RNA.608-201ENST00000410647 95 ntBASIC3.2□□□□□ -1.9
CALD1Q05682 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.2□□□□□ -1.9
CALD1Q05682 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.2□□□□□ -1.9
CALD1Q05682 RAC1P6-201ENST00000423911 575 ntBASIC3.2□□□□□ -1.9
CALD1Q05682 AL356583.2-201ENST00000426536 280 ntBASIC3.2□□□□□ -1.9
CALD1Q05682 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.2□□□□□ -1.9
CALD1Q05682 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.2□□□□□ -1.9
CALD1Q05682 MTND1P30-201ENST00000441241 901 ntBASIC3.2□□□□□ -1.9
CALD1Q05682 NEFMP1-201ENST00000443423 1006 ntBASIC3.2□□□□□ -1.9
CALD1Q05682 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.2□□□□□ -1.9
CALD1Q05682 RPL37P6-201ENST00000460682 294 ntBASIC3.2□□□□□ -1.9
CALD1Q05682 UBE2DNL-203ENST00000474922 222 ntBASIC3.2□□□□□ -1.9
CALD1Q05682 RPS27P27-201ENST00000498779 255 ntBASIC3.2□□□□□ -1.9
CALD1Q05682 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms