Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
HIST1H1AQ02539 USP9YP19-201ENST00000412165 485 ntBASIC1.06□□□□□ -2.24
HIST1H1AQ02539 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
HIST1H1AQ02539 USP9YP13-201ENST00000417797 480 ntBASIC1.06□□□□□ -2.24
HIST1H1AQ02539 FAM204CP-201ENST00000424489 642 ntBASIC1.06□□□□□ -2.24
HIST1H1AQ02539 AC008850.1-201ENST00000427546 362 ntBASIC1.06□□□□□ -2.24
HIST1H1AQ02539 AC005345.1-201ENST00000431868 217 ntBASIC1.06□□□□□ -2.24
HIST1H1AQ02539 AP000949.1-201ENST00000438328 629 ntBASIC1.06□□□□□ -2.24
HIST1H1AQ02539 AC010095.1-201ENST00000443543 144 ntBASIC1.06□□□□□ -2.24
HIST1H1AQ02539 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.06□□□□□ -2.24
HIST1H1AQ02539 AL137159.1-201ENST00000452808 512 ntBASIC1.06□□□□□ -2.24
HIST1H1AQ02539 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.06□□□□□ -2.24
HIST1H1AQ02539 RNA5SP57-201ENST00000459463 123 ntBASIC1.06□□□□□ -2.24
HIST1H1AQ02539 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
HIST1H1AQ02539 RNU6-416P-201ENST00000516265 103 ntBASIC1.06□□□□□ -2.24
HIST1H1AQ02539 AP000889.1-201ENST00000530968 660 ntBASIC1.06□□□□□ -2.24
HIST1H1AQ02539 NDUFA5P6-201ENST00000542110 379 ntBASIC1.06□□□□□ -2.24
HIST1H1AQ02539 AC067805.1-201ENST00000559344 470 ntBASIC1.06□□□□□ -2.24
HIST1H1AQ02539 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.06□□□□□ -2.24
HIST1H1AQ02539 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.06□□□□□ -2.24
HIST1H1AQ02539 MIR4422-201ENST00000581938 83 ntBASIC1.06□□□□□ -2.24
HIST1H1AQ02539 AC025811.1-201ENST00000604312 472 ntBASIC1.06□□□□□ -2.24
HIST1H1AQ02539 AC013476.2-201ENST00000614456 459 ntBASIC1.06□□□□□ -2.24
HIST1H1AQ02539 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.06□□□□□ -2.24
HIST1H1AQ02539 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.06□□□□□ -2.24
HIST1H1AQ02539 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
HIST1H1AQ02539 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
HIST1H1AQ02539 ZNF849P-201ENST00000594711 1566 ntBASIC1.05□□□□□ -2.24
HIST1H1AQ02539 MIR758-201ENST00000390227 88 ntBASIC1.05□□□□□ -2.24
HIST1H1AQ02539 RNU6-174P-201ENST00000410406 106 ntBASIC1.05□□□□□ -2.24
HIST1H1AQ02539 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.05□□□□□ -2.24
HIST1H1AQ02539 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.05□□□□□ -2.24
HIST1H1AQ02539 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.05□□□□□ -2.24
HIST1H1AQ02539 AC079448.1-201ENST00000449377 373 ntBASIC1.05□□□□□ -2.24
HIST1H1AQ02539 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.05□□□□□ -2.24
HIST1H1AQ02539 RN7SL429P-201ENST00000479090 223 ntBASIC1.05□□□□□ -2.24
HIST1H1AQ02539 RN7SL489P-201ENST00000486185 223 ntBASIC1.05□□□□□ -2.24
HIST1H1AQ02539 RN7SL327P-201ENST00000488659 223 ntBASIC1.05□□□□□ -2.24
HIST1H1AQ02539 AC018437.1-201ENST00000492214 406 ntBASIC1.05□□□□□ -2.24
HIST1H1AQ02539 YWHAEP4-201ENST00000505390 198 ntBASIC1.05□□□□□ -2.24
HIST1H1AQ02539 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.05□□□□□ -2.24
HIST1H1AQ02539 SMURF2P1-201ENST00000514992 481 ntBASIC1.05□□□□□ -2.24
HIST1H1AQ02539 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
HIST1H1AQ02539 RN7SKP179-201ENST00000516126 217 ntBASIC1.05□□□□□ -2.24
HIST1H1AQ02539 RNU1-92P-201ENST00000517017 135 ntBASIC1.05□□□□□ -2.24
HIST1H1AQ02539 AP003497.1-201ENST00000528472 562 ntBASIC1.05□□□□□ -2.24
HIST1H1AQ02539 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.05□□□□□ -2.24
HIST1H1AQ02539 AL356432.3-201ENST00000568952 465 ntBASIC1.05□□□□□ -2.24
HIST1H1AQ02539 SNRPGP17-201ENST00000603780 214 ntBASIC1.05□□□□□ -2.24
HIST1H1AQ02539 AC116312.1-201ENST00000606841 314 ntBASIC1.05□□□□□ -2.24
HIST1H1AQ02539 AC024257.5-201ENST00000612739 531 ntBASIC1.05□□□□□ -2.24
HIST1H1AQ02539 RN7SL853P-201ENST00000617250 223 ntBASIC1.05□□□□□ -2.24
HIST1H1AQ02539 U1.36-201ENST00000620684 176 ntBASIC1.05□□□□□ -2.24
HIST1H1AQ02539 MIR7843-201ENST00000622274 79 ntBASIC1.05□□□□□ -2.24
HIST1H1AQ02539 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.05□□□□□ -2.24
HIST1H1AQ02539 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
HIST1H1AQ02539 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.04□□□□□ -2.24
HIST1H1AQ02539 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
HIST1H1AQ02539 Y_RNA.67-201ENST00000362870 100 ntBASIC1.04□□□□□ -2.24
HIST1H1AQ02539 RNU6-252P-201ENST00000363232 107 ntBASIC1.04□□□□□ -2.24
HIST1H1AQ02539 RNU6-203P-201ENST00000384038 104 ntBASIC1.04□□□□□ -2.24
HIST1H1AQ02539 RNU6-939P-201ENST00000384634 107 ntBASIC1.04□□□□□ -2.24
HIST1H1AQ02539 MIR29C-201ENST00000385231 88 ntBASIC1.04□□□□□ -2.24
HIST1H1AQ02539 MIR1283-2-201ENST00000408621 87 ntBASIC1.04□□□□□ -2.24
HIST1H1AQ02539 AL354941.1-201ENST00000438600 464 ntBASIC1.04□□□□□ -2.24
HIST1H1AQ02539 AL929288.2-201ENST00000446368 407 ntBASIC1.04□□□□□ -2.24
HIST1H1AQ02539 SUMO2P2-201ENST00000456482 255 ntBASIC1.04□□□□□ -2.24
HIST1H1AQ02539 OR9N1P-202ENST00000494289 481 ntBASIC1.04□□□□□ -2.24
HIST1H1AQ02539 AC093801.2-201ENST00000503966 1050 ntBASIC1.04□□□□□ -2.24
HIST1H1AQ02539 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.04□□□□□ -2.24
HIST1H1AQ02539 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.04□□□□□ -2.24
HIST1H1AQ02539 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.04□□□□□ -2.24
HIST1H1AQ02539 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.04□□□□□ -2.24
HIST1H1AQ02539 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.04□□□□□ -2.24
HIST1H1AQ02539 AC095057.3-201ENST00000567102 1157 ntBASIC1.04□□□□□ -2.24
HIST1H1AQ02539 AL670379.6-201ENST00000603753 252 ntBASIC1.04□□□□□ -2.24
HIST1H1AQ02539 AC098826.3-201ENST00000603823 466 ntBASIC1.04□□□□□ -2.24
HIST1H1AQ02539 AL670379.11-201ENST00000604059 253 ntBASIC1.04□□□□□ -2.24
HIST1H1AQ02539 AC091152.3-201ENST00000604227 325 ntBASIC1.04□□□□□ -2.24
HIST1H1AQ02539 AL670379.10-201ENST00000604330 253 ntBASIC1.04□□□□□ -2.24
HIST1H1AQ02539 AL645939.4-201ENST00000604495 135 ntBASIC1.04□□□□□ -2.24
HIST1H1AQ02539 AC008162.1-201ENST00000604718 254 ntBASIC1.04□□□□□ -2.24
HIST1H1AQ02539 AL670379.1-201ENST00000604752 252 ntBASIC1.04□□□□□ -2.24
HIST1H1AQ02539 AL670379.2-201ENST00000604983 252 ntBASIC1.04□□□□□ -2.24
HIST1H1AQ02539 AL670379.5-201ENST00000605253 252 ntBASIC1.04□□□□□ -2.24
HIST1H1AQ02539 AL670379.4-201ENST00000605279 254 ntBASIC1.04□□□□□ -2.24
HIST1H1AQ02539 AL670379.12-201ENST00000605291 253 ntBASIC1.04□□□□□ -2.24
HIST1H1AQ02539 AL670379.8-201ENST00000605353 252 ntBASIC1.04□□□□□ -2.24
HIST1H1AQ02539 AL670379.9-201ENST00000605428 253 ntBASIC1.04□□□□□ -2.24
HIST1H1AQ02539 AL670379.7-201ENST00000605823 252 ntBASIC1.04□□□□□ -2.24
HIST1H1AQ02539 AC073569.3-201ENST00000619055 682 ntBASIC1.04□□□□□ -2.24
HIST1H1AQ02539 AL159972.1-201ENST00000625150 448 ntBASIC1.04□□□□□ -2.24
HIST1H1AQ02539 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.04□□□□□ -2.24
HIST1H1AQ02539 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
HIST1H1AQ02539 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.24
HIST1H1AQ02539 SNORA67.5-201ENST00000391036 107 ntBASIC1.03□□□□□ -2.24
HIST1H1AQ02539 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
HIST1H1AQ02539 SFR1P2-201ENST00000421841 730 ntBASIC1.03□□□□□ -2.24
HIST1H1AQ02539 RAD1P2-201ENST00000446414 663 ntBASIC1.03□□□□□ -2.24
HIST1H1AQ02539 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms