Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 MTRNR2L2-201ENST00000604882 87 ntBASIC0.39□□□□□ -2.35
HSPG2P98160 AC019131.2-201ENST00000609071 870 ntBASIC0.39□□□□□ -2.35
HSPG2P98160 FAM157A-202ENST00000615155 405 ntBASIC0.39□□□□□ -2.35
HSPG2P98160 MIR6076-201ENST00000617521 113 ntBASIC0.39□□□□□ -2.35
HSPG2P98160 AC010809.3-201ENST00000621310 641 ntBASIC0.39□□□□□ -2.35
HSPG2P98160 AC109454.4-201ENST00000623411 649 ntBASIC0.39□□□□□ -2.35
HSPG2P98160 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC0.39□□□□□ -2.35
HSPG2P98160 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
HSPG2P98160 AL022718.1-201ENST00000412004 84 ntBASIC0.38□□□□□ -2.35
HSPG2P98160 RPL30P11-201ENST00000495304 339 ntBASIC0.38□□□□□ -2.35
HSPG2P98160 BOLA3P3-201ENST00000505182 232 ntBASIC0.38□□□□□ -2.35
HSPG2P98160 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC0.38□□□□□ -2.35
HSPG2P98160 AC109635.4-202ENST00000531666 412 ntBASIC0.38□□□□□ -2.35
HSPG2P98160 AC023932.2-201ENST00000603176 175 ntBASIC0.38□□□□□ -2.35
HSPG2P98160 ZNF702P-202ENST00000434269 1966 ntBASIC0.38□□□□□ -2.35
HSPG2P98160 MTCO1P23-201ENST00000415223 1526 ntBASIC0.38□□□□□ -2.35
HSPG2P98160 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC0.38□□□□□ -2.35
HSPG2P98160 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
HSPG2P98160 RNA5SP450-201ENST00000411206 102 ntBASIC0.38□□□□□ -2.35
HSPG2P98160 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC0.38□□□□□ -2.35
HSPG2P98160 SNRPGP12-201ENST00000449481 213 ntBASIC0.38□□□□□ -2.35
HSPG2P98160 AL513343.1-201ENST00000451818 792 ntBASIC0.38□□□□□ -2.35
HSPG2P98160 RPS20P20-201ENST00000460498 340 ntBASIC0.38□□□□□ -2.35
HSPG2P98160 NCOR1P1-202ENST00000486162 291 ntBASIC0.38□□□□□ -2.35
HSPG2P98160 RNU6-943P-201ENST00000516960 98 ntBASIC0.38□□□□□ -2.35
HSPG2P98160 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC0.38□□□□□ -2.35
HSPG2P98160 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC0.38□□□□□ -2.35
HSPG2P98160 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC0.38□□□□□ -2.35
HSPG2P98160 AL627230.6-201ENST00000611129 280 ntBASIC0.38□□□□□ -2.35
HSPG2P98160 LINC02211-204ENST00000642024 1070 ntBASIC0.38□□□□□ -2.35
HSPG2P98160 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
HSPG2P98160 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.38□□□□□ -2.35
HSPG2P98160 Y_RNA.35-201ENST00000362601 101 ntBASIC0.38□□□□□ -2.35
HSPG2P98160 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.38□□□□□ -2.35
HSPG2P98160 SEPT2P1-201ENST00000419651 180 ntBASIC0.38□□□□□ -2.35
HSPG2P98160 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC0.38□□□□□ -2.35
HSPG2P98160 LAMTOR3P1-201ENST00000428620 370 ntBASIC0.38□□□□□ -2.35
HSPG2P98160 AL161651.1-201ENST00000440882 223 ntBASIC0.38□□□□□ -2.35
HSPG2P98160 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC0.38□□□□□ -2.35
HSPG2P98160 AC010620.1-201ENST00000601088 1102 ntBASIC0.38□□□□□ -2.35
HSPG2P98160 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC0.38□□□□□ -2.35
HSPG2P98160 AC243829.3-201ENST00000622177 108 ntBASIC0.38□□□□□ -2.35
HSPG2P98160 AC009812.4-201ENST00000569134 1805 ntBASIC0.38□□□□□ -2.35
HSPG2P98160 SDAD1P2-201ENST00000441308 2028 ntBASIC0.38□□□□□ -2.35
HSPG2P98160 Y_RNA.170-201ENST00000363746 110 ntBASIC0.38□□□□□ -2.35
HSPG2P98160 SNORA4.3-201ENST00000365564 137 ntBASIC0.38□□□□□ -2.35
HSPG2P98160 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.38□□□□□ -2.35
HSPG2P98160 AC139453.3-201ENST00000493276 369 ntBASIC0.38□□□□□ -2.35
HSPG2P98160 AC104108.1-201ENST00000509930 412 ntBASIC0.38□□□□□ -2.35
HSPG2P98160 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.38□□□□□ -2.35
HSPG2P98160 AC007038.2-201ENST00000608095 740 ntBASIC0.38□□□□□ -2.35
HSPG2P98160 AL356473.1-201ENST00000406203 1408 ntBASIC0.38□□□□□ -2.35
HSPG2P98160 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.37□□□□□ -2.35
HSPG2P98160 RNU6-600P-201ENST00000362524 99 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 RNU6-19P-201ENST00000384718 107 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.37□□□□□ -2.35
HSPG2P98160 AL606495.1-201ENST00000422100 813 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 AC023347.2-201ENST00000433994 462 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 RNF2P1-201ENST00000442955 1010 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 AC010099.1-201ENST00000455434 375 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 KLF3P2-201ENST00000465138 268 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 PABPC1P3-201ENST00000469174 459 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 HMGB1P38-201ENST00000490557 577 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC0.37□□□□□ -2.35
HSPG2P98160 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.37□□□□□ -2.35
HSPG2P98160 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.37□□□□□ -2.35
HSPG2P98160 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.37□□□□□ -2.35
HSPG2P98160 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.37□□□□□ -2.35
HSPG2P98160 DUSP12P1-201ENST00000612874 516 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 AL022578.1-201ENST00000439330 1433 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC0.37□□□□□ -2.35
HSPG2P98160 Y_RNA.132-201ENST00000363421 102 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 RNY3-201ENST00000365484 102 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 RNU6-317P-201ENST00000384031 107 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 RNU6-837P-201ENST00000391056 108 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 AL513475.1-201ENST00000406602 315 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC0.37□□□□□ -2.35
HSPG2P98160 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC0.37□□□□□ -2.35
HSPG2P98160 RNU7-27P-201ENST00000459281 62 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 AC005741.1-201ENST00000511094 432 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC0.37□□□□□ -2.35
HSPG2P98160 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.37□□□□□ -2.35
HSPG2P98160 AC008739.2-201ENST00000597006 317 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.37□□□□□ -2.35
HSPG2P98160 CYP2C61P-201ENST00000604072 290 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 AC003001.2-201ENST00000616294 831 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 AC068880.5-201ENST00000624331 290 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 MIR6866-201ENST00000638146 69 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
HSPG2P98160 RNU4-42P-201ENST00000364738 142 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 MIR320B1-201ENST00000390209 79 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 RPL7P30-201ENST00000420888 709 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 VN1R42P-201ENST00000424651 344 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC0.37□□□□□ -2.35
HSPG2P98160 MTND5P15-201ENST00000434246 349 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 TRBV8-1-201ENST00000481590 279 ntBASIC0.37□□□□□ -2.35
HSPG2P98160 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.37□□□□□ -2.35
HSPG2P98160 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.37□□□□□ -2.35
HSPG2P98160 COX6CP3-201ENST00000580869 223 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms