Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.36□□□□□ -2.03
CCNA1P78396 RPL23AP76-201ENST00000441860 458 ntBASIC2.36□□□□□ -2.03
CCNA1P78396 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.36□□□□□ -2.03
CCNA1P78396 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.36□□□□□ -2.03
CCNA1P78396 DYNLL1P5-201ENST00000467158 270 ntBASIC2.36□□□□□ -2.03
CCNA1P78396 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.36□□□□□ -2.03
CCNA1P78396 AC004263.1-201ENST00000479327 332 ntBASIC2.36□□□□□ -2.03
CCNA1P78396 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.36□□□□□ -2.03
CCNA1P78396 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.36□□□□□ -2.03
CCNA1P78396 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.36□□□□□ -2.03
CCNA1P78396 RNA5SP112-201ENST00000515937 99 ntBASIC2.36□□□□□ -2.03
CCNA1P78396 RNY4P37-201ENST00000516225 96 ntBASIC2.36□□□□□ -2.03
CCNA1P78396 SNORA31.6-201ENST00000516241 130 ntBASIC2.36□□□□□ -2.03
CCNA1P78396 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
CCNA1P78396 AC010376.1-201ENST00000522101 334 ntBASIC2.36□□□□□ -2.03
CCNA1P78396 DEFB131D-201ENST00000526803 184 ntBASIC2.36□□□□□ -2.03
CCNA1P78396 AP000889.2-201ENST00000532684 490 ntBASIC2.36□□□□□ -2.03
CCNA1P78396 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.36□□□□□ -2.03
CCNA1P78396 AL512347.1-201ENST00000566420 503 ntBASIC2.36□□□□□ -2.03
CCNA1P78396 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.36□□□□□ -2.03
CCNA1P78396 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.36□□□□□ -2.03
CCNA1P78396 MIR6845-201ENST00000613182 61 ntBASIC2.36□□□□□ -2.03
CCNA1P78396 U4atac.1-201ENST00000618345 95 ntBASIC2.36□□□□□ -2.03
CCNA1P78396 AL049777.1-201ENST00000622740 518 ntBASIC2.36□□□□□ -2.03
CCNA1P78396 AC079416.3-201ENST00000624479 549 ntBASIC2.36□□□□□ -2.03
CCNA1P78396 U2.21-201ENST00000637295 81 ntBASIC2.36□□□□□ -2.03
CCNA1P78396 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCNA1P78396 AC011477.1-204ENST00000623416 1325 ntBASIC2.36□□□□□ -2.03
CCNA1P78396 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCNA1P78396 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCNA1P78396 SNORD116-12-201ENST00000384468 92 ntBASIC2.35□□□□□ -2.03
CCNA1P78396 RNA5SP270-201ENST00000411361 118 ntBASIC2.35□□□□□ -2.03
CCNA1P78396 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.35□□□□□ -2.03
CCNA1P78396 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.35□□□□□ -2.03
CCNA1P78396 COX7BP2-201ENST00000437976 242 ntBASIC2.35□□□□□ -2.03
CCNA1P78396 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.35□□□□□ -2.03
CCNA1P78396 MTND1P31-201ENST00000449206 961 ntBASIC2.35□□□□□ -2.03
CCNA1P78396 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCNA1P78396 RNU6-390P-201ENST00000516259 103 ntBASIC2.35□□□□□ -2.03
CCNA1P78396 Y_RNA.676-201ENST00000516393 96 ntBASIC2.35□□□□□ -2.03
CCNA1P78396 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.35□□□□□ -2.03
CCNA1P78396 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.35□□□□□ -2.03
CCNA1P78396 AC087241.2-201ENST00000535801 324 ntBASIC2.35□□□□□ -2.03
CCNA1P78396 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCNA1P78396 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.35□□□□□ -2.03
CCNA1P78396 ISCA1P3-201ENST00000577104 373 ntBASIC2.35□□□□□ -2.03
CCNA1P78396 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCNA1P78396 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.35□□□□□ -2.03
CCNA1P78396 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.35□□□□□ -2.03
CCNA1P78396 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.35□□□□□ -2.03
CCNA1P78396 AL391813.2-201ENST00000609113 322 ntBASIC2.35□□□□□ -2.03
CCNA1P78396 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.35□□□□□ -2.03
CCNA1P78396 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.35□□□□□ -2.03
CCNA1P78396 AL359854.1-201ENST00000614203 1594 ntBASIC2.35□□□□□ -2.03
CCNA1P78396 DDX43P2-201ENST00000604753 1354 ntBASIC2.35□□□□□ -2.03
CCNA1P78396 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
CCNA1P78396 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.34□□□□□ -2.03
CCNA1P78396 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CCNA1P78396 RNA5SP125-201ENST00000364843 120 ntBASIC2.34□□□□□ -2.03
CCNA1P78396 RNU6-1176P-201ENST00000390955 107 ntBASIC2.34□□□□□ -2.03
CCNA1P78396 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.34□□□□□ -2.03
CCNA1P78396 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.34□□□□□ -2.03
CCNA1P78396 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.34□□□□□ -2.03
CCNA1P78396 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CCNA1P78396 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.34□□□□□ -2.03
CCNA1P78396 MTND1P28-201ENST00000435623 950 ntBASIC2.34□□□□□ -2.03
CCNA1P78396 FABP5P14-201ENST00000437273 393 ntBASIC2.34□□□□□ -2.03
CCNA1P78396 MTCO1P53-201ENST00000441633 699 ntBASIC2.34□□□□□ -2.03
CCNA1P78396 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.34□□□□□ -2.03
CCNA1P78396 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.34□□□□□ -2.03
CCNA1P78396 PSPHP1-201ENST00000450062 261 ntBASIC2.34□□□□□ -2.03
CCNA1P78396 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.34□□□□□ -2.03
CCNA1P78396 RNU6-150P-201ENST00000516237 95 ntBASIC2.34□□□□□ -2.03
CCNA1P78396 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.34□□□□□ -2.03
CCNA1P78396 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.34□□□□□ -2.03
CCNA1P78396 AC021451.1-201ENST00000523498 1129 ntBASIC2.34□□□□□ -2.03
CCNA1P78396 PRELID2P1-201ENST00000552837 301 ntBASIC2.34□□□□□ -2.03
CCNA1P78396 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.34□□□□□ -2.03
CCNA1P78396 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.34□□□□□ -2.03
CCNA1P78396 BNIP3P27-201ENST00000599991 412 ntBASIC2.34□□□□□ -2.03
CCNA1P78396 AF129408.1-201ENST00000608767 431 ntBASIC2.34□□□□□ -2.03
CCNA1P78396 Y_RNA.783-201ENST00000613546 102 ntBASIC2.34□□□□□ -2.03
CCNA1P78396 AC011939.3-201ENST00000613686 466 ntBASIC2.34□□□□□ -2.03
CCNA1P78396 AL121895.2-201ENST00000619558 447 ntBASIC2.34□□□□□ -2.03
CCNA1P78396 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCNA1P78396 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCNA1P78396 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CCNA1P78396 SNORA80E-201ENST00000384744 137 ntBASIC2.33□□□□□ -2.04
CCNA1P78396 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.33□□□□□ -2.04
CCNA1P78396 RPS24P7-201ENST00000416921 246 ntBASIC2.33□□□□□ -2.04
CCNA1P78396 BTF3L4P3-201ENST00000418879 476 ntBASIC2.33□□□□□ -2.04
CCNA1P78396 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.33□□□□□ -2.04
CCNA1P78396 USP9YP26-201ENST00000421008 661 ntBASIC2.33□□□□□ -2.04
CCNA1P78396 SKA2P1-201ENST00000425592 390 ntBASIC2.33□□□□□ -2.04
CCNA1P78396 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.33□□□□□ -2.04
CCNA1P78396 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.33□□□□□ -2.04
CCNA1P78396 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.33□□□□□ -2.04
CCNA1P78396 PAXBP1P1-201ENST00000449315 447 ntBASIC2.33□□□□□ -2.04
CCNA1P78396 AL441985.1-201ENST00000457727 251 ntBASIC2.33□□□□□ -2.04
CCNA1P78396 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms