Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.63□□□□□ -1.99
SRP54P61011 IGHVIII-44-202ENST00000636235 289 ntBASIC2.63□□□□□ -1.99
SRP54P61011 MIR3199-2-201ENST00000636243 86 ntBASIC2.63□□□□□ -1.99
SRP54P61011 MIR7515-201ENST00000637837 67 ntBASIC2.63□□□□□ -1.99
SRP54P61011 Z82195.2-201ENST00000612348 18351 ntBASIC2.63□□□□□ -1.99
SRP54P61011 AC010889.1-201ENST00000566193 2666 ntBASIC2.63□□□□□ -1.99
SRP54P61011 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SRP54P61011 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SRP54P61011 RNU5A-2P-201ENST00000384337 116 ntBASIC2.62□□□□□ -1.99
SRP54P61011 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.62□□□□□ -1.99
SRP54P61011 AL353729.1-201ENST00000425044 720 ntBASIC2.62□□□□□ -1.99
SRP54P61011 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.62□□□□□ -1.99
SRP54P61011 RPS29P6-201ENST00000438196 145 ntBASIC2.62□□□□□ -1.99
SRP54P61011 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.62□□□□□ -1.99
SRP54P61011 DPPA3P1-201ENST00000448050 469 ntBASIC2.62□□□□□ -1.99
SRP54P61011 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.62□□□□□ -1.99
SRP54P61011 RN7SL297P-201ENST00000483161 293 ntBASIC2.62□□□□□ -1.99
SRP54P61011 RPL39P36-201ENST00000490784 156 ntBASIC2.62□□□□□ -1.99
SRP54P61011 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.62□□□□□ -1.99
SRP54P61011 RPL37P25-201ENST00000507308 276 ntBASIC2.62□□□□□ -1.99
SRP54P61011 MTND1P22-201ENST00000510572 951 ntBASIC2.62□□□□□ -1.99
SRP54P61011 SCARNA17.1-201ENST00000516211 143 ntBASIC2.62□□□□□ -1.99
SRP54P61011 SCARNA17.2-201ENST00000516334 143 ntBASIC2.62□□□□□ -1.99
SRP54P61011 SNORD19.2-201ENST00000516978 73 ntBASIC2.62□□□□□ -1.99
SRP54P61011 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
SRP54P61011 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.62□□□□□ -1.99
SRP54P61011 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.62□□□□□ -1.99
SRP54P61011 AC011979.2-201ENST00000527568 352 ntBASIC2.62□□□□□ -1.99
SRP54P61011 ARL2BPP2-201ENST00000550907 489 ntBASIC2.62□□□□□ -1.99
SRP54P61011 MIR3616-201ENST00000584070 92 ntBASIC2.62□□□□□ -1.99
SRP54P61011 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.62□□□□□ -1.99
SRP54P61011 AC007363.1-201ENST00000604736 620 ntBASIC2.62□□□□□ -1.99
SRP54P61011 AP000860.1-201ENST00000605250 559 ntBASIC2.62□□□□□ -1.99
SRP54P61011 BX664608.1-201ENST00000610519 487 ntBASIC2.62□□□□□ -1.99
SRP54P61011 AL589743.7-201ENST00000612637 233 ntBASIC2.62□□□□□ -1.99
SRP54P61011 SCARNA17.4-201ENST00000614296 143 ntBASIC2.62□□□□□ -1.99
SRP54P61011 AC131159.1-201ENST00000621854 213 ntBASIC2.62□□□□□ -1.99
SRP54P61011 AC068057.2-201ENST00000624047 895 ntBASIC2.62□□□□□ -1.99
SRP54P61011 AC017037.3-201ENST00000625016 472 ntBASIC2.62□□□□□ -1.99
SRP54P61011 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
SRP54P61011 ZNF271P-202ENST00000465539 1970 ntBASIC2.61□□□□□ -1.99
SRP54P61011 RNU4-82P-201ENST00000362443 140 ntBASIC2.61□□□□□ -1.99
SRP54P61011 RNA5SP68-201ENST00000363885 119 ntBASIC2.61□□□□□ -1.99
SRP54P61011 RNY4P16-201ENST00000364768 94 ntBASIC2.61□□□□□ -1.99
SRP54P61011 RNU2-36P-201ENST00000410361 191 ntBASIC2.61□□□□□ -1.99
SRP54P61011 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.61□□□□□ -1.99
SRP54P61011 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.61□□□□□ -1.99
SRP54P61011 HMGB3P12-201ENST00000438745 556 ntBASIC2.61□□□□□ -1.99
SRP54P61011 HMGN2P10-201ENST00000448085 265 ntBASIC2.61□□□□□ -1.99
SRP54P61011 SSXP1-201ENST00000453640 473 ntBASIC2.61□□□□□ -1.99
SRP54P61011 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.61□□□□□ -1.99
SRP54P61011 TRBV1-201ENST00000476502 284 ntBASIC2.61□□□□□ -1.99
SRP54P61011 RPS15AP34-201ENST00000487776 387 ntBASIC2.61□□□□□ -1.99
SRP54P61011 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.61□□□□□ -1.99
SRP54P61011 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.61□□□□□ -1.99
SRP54P61011 RNU2-10P-201ENST00000516375 211 ntBASIC2.61□□□□□ -1.99
SRP54P61011 SNORA31.18-201ENST00000517043 134 ntBASIC2.61□□□□□ -1.99
SRP54P61011 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.61□□□□□ -1.99
SRP54P61011 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.61□□□□□ -1.99
SRP54P61011 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.61□□□□□ -1.99
SRP54P61011 AC007151.1-201ENST00000572774 483 ntBASIC2.61□□□□□ -1.99
SRP54P61011 AC024619.4-201ENST00000580924 316 ntBASIC2.61□□□□□ -1.99
SRP54P61011 AC090616.2-202ENST00000584248 222 ntBASIC2.61□□□□□ -1.99
SRP54P61011 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.61□□□□□ -1.99
SRP54P61011 AL391813.1-201ENST00000603098 260 ntBASIC2.61□□□□□ -1.99
SRP54P61011 AC104763.2-201ENST00000604179 382 ntBASIC2.61□□□□□ -1.99
SRP54P61011 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.61□□□□□ -1.99
SRP54P61011 AC103710.2-201ENST00000609912 942 ntBASIC2.61□□□□□ -1.99
SRP54P61011 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.61□□□□□ -1.99
SRP54P61011 AC011939.3-201ENST00000613686 466 ntBASIC2.61□□□□□ -1.99
SRP54P61011 MIR6817-201ENST00000615588 66 ntBASIC2.61□□□□□ -1.99
SRP54P61011 AC006338.1-201ENST00000618453 749 ntBASIC2.61□□□□□ -1.99
SRP54P61011 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SRP54P61011 AC091953.2-201ENST00000623979 160 ntBASIC2.61□□□□□ -1.99
SRP54P61011 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.61□□□□□ -1.99
SRP54P61011 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
SRP54P61011 AC010329.5-201ENST00000623497 2174 ntBASIC2.6□□□□□ -1.99
SRP54P61011 NACAP2-201ENST00000318548 624 ntBASIC2.6□□□□□ -1.99
SRP54P61011 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SRP54P61011 RNU5E-6P-201ENST00000365574 115 ntBASIC2.6□□□□□ -1.99
SRP54P61011 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.6□□□□□ -1.99
SRP54P61011 RNU6-1083P-201ENST00000384022 107 ntBASIC2.6□□□□□ -1.99
SRP54P61011 AL139039.1-201ENST00000401900 692 ntBASIC2.6□□□□□ -1.99
SRP54P61011 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.6□□□□□ -1.99
SRP54P61011 SEPT2P1-201ENST00000419651 180 ntBASIC2.6□□□□□ -1.99
SRP54P61011 AC011233.1-201ENST00000422812 283 ntBASIC2.6□□□□□ -1.99
SRP54P61011 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.6□□□□□ -1.99
SRP54P61011 CR769767.1-201ENST00000436337 346 ntBASIC2.6□□□□□ -1.99
SRP54P61011 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.6□□□□□ -1.99
SRP54P61011 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.6□□□□□ -1.99
SRP54P61011 RPL30P6-201ENST00000475925 342 ntBASIC2.6□□□□□ -1.99
SRP54P61011 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.6□□□□□ -1.99
SRP54P61011 AC005178.1-201ENST00000508392 440 ntBASIC2.6□□□□□ -1.99
SRP54P61011 RNU6-143P-201ENST00000516942 93 ntBASIC2.6□□□□□ -1.99
SRP54P61011 RNU6-1092P-201ENST00000516955 87 ntBASIC2.6□□□□□ -1.99
SRP54P61011 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SRP54P61011 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.6□□□□□ -1.99
SRP54P61011 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.6□□□□□ -1.99
SRP54P61011 AC021739.1-201ENST00000559631 174 ntBASIC2.6□□□□□ -1.99
SRP54P61011 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms