Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC245297.2-201ENST00000610119 565 ntBASIC2.02□□□□□ -2.09
CLDN6P56747 AC011890.2-201ENST00000613393 294 ntBASIC2.02□□□□□ -2.09
CLDN6P56747 MIR6895-201ENST00000613497 78 ntBASIC2.02□□□□□ -2.09
CLDN6P56747 AC010678.1-201ENST00000614118 713 ntBASIC2.02□□□□□ -2.09
CLDN6P56747 AL158801.5-201ENST00000623123 465 ntBASIC2.02□□□□□ -2.09
CLDN6P56747 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CLDN6P56747 ADAM3A-203ENST00000461344 2157 ntBASIC2.01□□□□□ -2.09
CLDN6P56747 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.01□□□□□ -2.09
CLDN6P56747 RNU6-1167P-201ENST00000363227 94 ntBASIC2.01□□□□□ -2.09
CLDN6P56747 RNU6-621P-201ENST00000364752 109 ntBASIC2.01□□□□□ -2.09
CLDN6P56747 MIR583-201ENST00000384846 75 ntBASIC2.01□□□□□ -2.09
CLDN6P56747 MIR144-201ENST00000384886 86 ntBASIC2.01□□□□□ -2.09
CLDN6P56747 SNORA40.4-201ENST00000390971 128 ntBASIC2.01□□□□□ -2.09
CLDN6P56747 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.01□□□□□ -2.09
CLDN6P56747 RNU2-68P-201ENST00000410878 191 ntBASIC2.01□□□□□ -2.09
CLDN6P56747 RPL21P24-201ENST00000413752 448 ntBASIC2.01□□□□□ -2.09
CLDN6P56747 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.01□□□□□ -2.09
CLDN6P56747 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.01□□□□□ -2.09
CLDN6P56747 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.01□□□□□ -2.09
CLDN6P56747 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.01□□□□□ -2.09
CLDN6P56747 MICF-203ENST00000432679 129 ntBASIC2.01□□□□□ -2.09
CLDN6P56747 AC003989.2-201ENST00000440224 169 ntBASIC2.01□□□□□ -2.09
CLDN6P56747 MTATP6P30-201ENST00000443540 664 ntBASIC2.01□□□□□ -2.09
CLDN6P56747 AC007327.1-201ENST00000447461 264 ntBASIC2.01□□□□□ -2.09
CLDN6P56747 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.01□□□□□ -2.09
CLDN6P56747 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.01□□□□□ -2.09
CLDN6P56747 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.01□□□□□ -2.09
CLDN6P56747 RNU6-1053P-201ENST00000515930 101 ntBASIC2.01□□□□□ -2.09
CLDN6P56747 AP000889.2-201ENST00000532684 490 ntBASIC2.01□□□□□ -2.09
CLDN6P56747 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.01□□□□□ -2.09
CLDN6P56747 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.01□□□□□ -2.09
CLDN6P56747 MIR4781-201ENST00000585250 76 ntBASIC2.01□□□□□ -2.09
CLDN6P56747 RPS15AP11-201ENST00000594193 385 ntBASIC2.01□□□□□ -2.09
CLDN6P56747 AC005261.5-201ENST00000596280 355 ntBASIC2.01□□□□□ -2.09
CLDN6P56747 BNIP3P27-201ENST00000599991 412 ntBASIC2.01□□□□□ -2.09
CLDN6P56747 AC092574.1-201ENST00000609771 420 ntBASIC2.01□□□□□ -2.09
CLDN6P56747 AC107075.1-201ENST00000613695 314 ntBASIC2.01□□□□□ -2.09
CLDN6P56747 AC009831.4-201ENST00000620744 325 ntBASIC2.01□□□□□ -2.09
CLDN6P56747 MIR6132-201ENST00000622083 109 ntBASIC2.01□□□□□ -2.09
CLDN6P56747 AL138955.1-201ENST00000622881 1040 ntBASIC2.01□□□□□ -2.09
CLDN6P56747 AC116618.1-201ENST00000634617 774 ntBASIC2.01□□□□□ -2.09
CLDN6P56747 AP006437.1-201ENST00000641440 3685 ntBASIC2.01□□□□□ -2.09
CLDN6P56747 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CLDN6P56747 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2□□□□□ -2.09
CLDN6P56747 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2□□□□□ -2.09
CLDN6P56747 MTND5P30-201ENST00000452896 1731 ntBASIC2□□□□□ -2.09
CLDN6P56747 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2□□□□□ -2.09
CLDN6P56747 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2□□□□□ -2.09
CLDN6P56747 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2□□□□□ -2.09
CLDN6P56747 RNA5SP125-201ENST00000364843 120 ntBASIC2□□□□□ -2.09
CLDN6P56747 USP9YP33-201ENST00000412220 421 ntBASIC2□□□□□ -2.09
CLDN6P56747 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2□□□□□ -2.09
CLDN6P56747 USP9YP26-201ENST00000421008 661 ntBASIC2□□□□□ -2.09
CLDN6P56747 USP9YP35-201ENST00000435696 412 ntBASIC2□□□□□ -2.09
CLDN6P56747 AP000949.1-201ENST00000438328 629 ntBASIC2□□□□□ -2.09
CLDN6P56747 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2□□□□□ -2.09
CLDN6P56747 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2□□□□□ -2.09
CLDN6P56747 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2□□□□□ -2.09
CLDN6P56747 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2□□□□□ -2.09
CLDN6P56747 RPL37P6-201ENST00000460682 294 ntBASIC2□□□□□ -2.09
CLDN6P56747 KLF3P2-201ENST00000465138 268 ntBASIC2□□□□□ -2.09
CLDN6P56747 AC010631.1-201ENST00000474150 156 ntBASIC2□□□□□ -2.09
CLDN6P56747 AC108729.1-201ENST00000487812 947 ntBASIC2□□□□□ -2.09
CLDN6P56747 AC104629.1-201ENST00000494226 508 ntBASIC2□□□□□ -2.09
CLDN6P56747 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2□□□□□ -2.09
CLDN6P56747 AC093809.1-201ENST00000509155 340 ntBASIC2□□□□□ -2.09
CLDN6P56747 AC109445.1-201ENST00000512356 383 ntBASIC2□□□□□ -2.09
CLDN6P56747 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2□□□□□ -2.09
CLDN6P56747 RNA5SP200-201ENST00000516360 103 ntBASIC2□□□□□ -2.09
CLDN6P56747 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2□□□□□ -2.09
CLDN6P56747 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2□□□□□ -2.09
CLDN6P56747 AC110588.1-201ENST00000559699 137 ntBASIC2□□□□□ -2.09
CLDN6P56747 MIR3167-201ENST00000579623 85 ntBASIC2□□□□□ -2.09
CLDN6P56747 AC021171.1-201ENST00000603137 706 ntBASIC2□□□□□ -2.09
CLDN6P56747 RPP40P2-201ENST00000603596 712 ntBASIC2□□□□□ -2.09
CLDN6P56747 DPPA3P3-201ENST00000603842 430 ntBASIC2□□□□□ -2.09
CLDN6P56747 AC069294.1-201ENST00000608397 350 ntBASIC2□□□□□ -2.09
CLDN6P56747 AL391813.2-201ENST00000609113 322 ntBASIC2□□□□□ -2.09
CLDN6P56747 AL133445.2-201ENST00000611191 527 ntBASIC2□□□□□ -2.09
CLDN6P56747 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2□□□□□ -2.09
CLDN6P56747 AL121895.2-201ENST00000619558 447 ntBASIC2□□□□□ -2.09
CLDN6P56747 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2□□□□□ -2.09
CLDN6P56747 AC079416.3-201ENST00000624479 549 ntBASIC2□□□□□ -2.09
CLDN6P56747 AC025048.6-202ENST00000627667 438 ntBASIC2□□□□□ -2.09
CLDN6P56747 PCMTD1P7-201ENST00000634506 357 ntBASIC2□□□□□ -2.09
CLDN6P56747 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2□□□□□ -2.09
CLDN6P56747 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
CLDN6P56747 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2□□□□□ -2.09
CLDN6P56747 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CLDN6P56747 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2□□□□□ -2.09
CLDN6P56747 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2□□□□□ -2.09
CLDN6P56747 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CLDN6P56747 ZNF720P1-201ENST00000562403 1939 ntBASIC1.99□□□□□ -2.09
CLDN6P56747 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.99□□□□□ -2.09
CLDN6P56747 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CLDN6P56747 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.99□□□□□ -2.09
CLDN6P56747 RPL17P12-201ENST00000413391 526 ntBASIC1.99□□□□□ -2.09
CLDN6P56747 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.99□□□□□ -2.09
CLDN6P56747 RPL30P4-201ENST00000429309 333 ntBASIC1.99□□□□□ -2.09
CLDN6P56747 AC244035.1-201ENST00000430042 390 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms