Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 RNY4P36-201ENST00000391116 96 ntBASIC3.82□□□□□ -1.8
PER3P56645 RNU6-370P-201ENST00000411008 104 ntBASIC3.82□□□□□ -1.8
PER3P56645 RNU6-607P-201ENST00000411283 108 ntBASIC3.82□□□□□ -1.8
PER3P56645 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PER3P56645 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.82□□□□□ -1.8
PER3P56645 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.82□□□□□ -1.8
PER3P56645 AL590632.1-201ENST00000424289 371 ntBASIC3.82□□□□□ -1.8
PER3P56645 YME1L1P1-201ENST00000429435 297 ntBASIC3.82□□□□□ -1.8
PER3P56645 RANP8-201ENST00000444720 713 ntBASIC3.82□□□□□ -1.8
PER3P56645 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.82□□□□□ -1.8
PER3P56645 RNU7-152P-201ENST00000458982 64 ntBASIC3.82□□□□□ -1.8
PER3P56645 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.82□□□□□ -1.8
PER3P56645 HMGB3P15-201ENST00000507326 574 ntBASIC3.82□□□□□ -1.8
PER3P56645 AC005741.1-201ENST00000511094 432 ntBASIC3.82□□□□□ -1.8
PER3P56645 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.82□□□□□ -1.8
PER3P56645 RNU6-1332P-201ENST00000516666 104 ntBASIC3.82□□□□□ -1.8
PER3P56645 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.82□□□□□ -1.8
PER3P56645 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.82□□□□□ -1.8
PER3P56645 AC020661.2-201ENST00000560114 134 ntBASIC3.82□□□□□ -1.8
PER3P56645 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PER3P56645 MIR1273C-201ENST00000578669 77 ntBASIC3.82□□□□□ -1.8
PER3P56645 LRRC37A5P-203ENST00000580181 585 ntBASIC3.82□□□□□ -1.8
PER3P56645 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.82□□□□□ -1.8
PER3P56645 MIR3690-201ENST00000580266 75 ntBASIC3.82□□□□□ -1.8
PER3P56645 MIR5692A1-201ENST00000580523 69 ntBASIC3.82□□□□□ -1.8
PER3P56645 RN7SL600P-201ENST00000581811 299 ntBASIC3.82□□□□□ -1.8
PER3P56645 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PER3P56645 AC084781.2-201ENST00000615568 161 ntBASIC3.82□□□□□ -1.8
PER3P56645 SNORD39.4-201ENST00000620099 78 ntBASIC3.82□□□□□ -1.8
PER3P56645 AL031601.2-202ENST00000622650 282 ntBASIC3.82□□□□□ -1.8
PER3P56645 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.82□□□□□ -1.8
PER3P56645 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PER3P56645 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PER3P56645 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PER3P56645 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PER3P56645 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PER3P56645 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.81□□□□□ -1.8
PER3P56645 MARK2P15-201ENST00000432204 2186 ntBASIC3.81□□□□□ -1.8
PER3P56645 AC138393.1-203ENST00000327086 343 ntBASIC3.81□□□□□ -1.8
PER3P56645 SNORA63.1-201ENST00000362493 131 ntBASIC3.81□□□□□ -1.8
PER3P56645 Y_RNA.315-201ENST00000365117 102 ntBASIC3.81□□□□□ -1.8
PER3P56645 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PER3P56645 MIR1183-201ENST00000408856 89 ntBASIC3.81□□□□□ -1.8
PER3P56645 AL353621.1-201ENST00000418219 243 ntBASIC3.81□□□□□ -1.8
PER3P56645 AL157831.1-201ENST00000426134 473 ntBASIC3.81□□□□□ -1.8
PER3P56645 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.81□□□□□ -1.8
PER3P56645 AL356867.1-201ENST00000429623 299 ntBASIC3.81□□□□□ -1.8
PER3P56645 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.81□□□□□ -1.8
PER3P56645 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.81□□□□□ -1.8
PER3P56645 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.81□□□□□ -1.8
PER3P56645 RPL23AP81-201ENST00000455252 467 ntBASIC3.81□□□□□ -1.8
PER3P56645 AC017037.1-201ENST00000508460 471 ntBASIC3.81□□□□□ -1.8
PER3P56645 RNU1-86P-201ENST00000516108 154 ntBASIC3.81□□□□□ -1.8
PER3P56645 RNU1-107P-201ENST00000516617 154 ntBASIC3.81□□□□□ -1.8
PER3P56645 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.81□□□□□ -1.8
PER3P56645 AC087369.1-201ENST00000520775 996 ntBASIC3.81□□□□□ -1.8
PER3P56645 AP003072.1-201ENST00000531740 145 ntBASIC3.81□□□□□ -1.8
PER3P56645 AL157871.3-201ENST00000557231 293 ntBASIC3.81□□□□□ -1.8
PER3P56645 AL354984.3-201ENST00000604803 325 ntBASIC3.81□□□□□ -1.8
PER3P56645 uc_338.32-201ENST00000615087 172 ntBASIC3.81□□□□□ -1.8
PER3P56645 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.81□□□□□ -1.8
PER3P56645 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
PER3P56645 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PER3P56645 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PER3P56645 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
PER3P56645 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.81□□□□□ -1.8
PER3P56645 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.8□□□□□ -1.8
PER3P56645 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PER3P56645 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
PER3P56645 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.8□□□□□ -1.8
PER3P56645 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.8□□□□□ -1.8
PER3P56645 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PER3P56645 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PER3P56645 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PER3P56645 MIR423-201ENST00000362201 94 ntBASIC3.8□□□□□ -1.8
PER3P56645 RNU6-562P-201ENST00000362731 107 ntBASIC3.8□□□□□ -1.8
PER3P56645 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.8□□□□□ -1.8
PER3P56645 RNA5SP189-201ENST00000364920 115 ntBASIC3.8□□□□□ -1.8
PER3P56645 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PER3P56645 MIR483-201ENST00000385070 76 ntBASIC3.8□□□□□ -1.8
PER3P56645 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.8□□□□□ -1.8
PER3P56645 MIR1290-201ENST00000408735 78 ntBASIC3.8□□□□□ -1.8
PER3P56645 RNU2-33P-201ENST00000410344 192 ntBASIC3.8□□□□□ -1.8
PER3P56645 SNORA74C-2-201ENST00000411179 201 ntBASIC3.8□□□□□ -1.8
PER3P56645 MTCO2P27-201ENST00000420740 428 ntBASIC3.8□□□□□ -1.8
PER3P56645 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.8□□□□□ -1.8
PER3P56645 AL139396.1-201ENST00000421137 167 ntBASIC3.8□□□□□ -1.8
PER3P56645 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PER3P56645 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.8□□□□□ -1.8
PER3P56645 MYL8P-204ENST00000431574 518 ntBASIC3.8□□□□□ -1.8
PER3P56645 RPL7P49-201ENST00000471402 708 ntBASIC3.8□□□□□ -1.8
PER3P56645 RPS29P19-201ENST00000479709 171 ntBASIC3.8□□□□□ -1.8
PER3P56645 AL160314.1-201ENST00000490836 438 ntBASIC3.8□□□□□ -1.8
PER3P56645 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PER3P56645 AC025554.1-201ENST00000505641 188 ntBASIC3.8□□□□□ -1.8
PER3P56645 RPL39P5-202ENST00000512505 151 ntBASIC3.8□□□□□ -1.8
PER3P56645 RNA5SP309-201ENST00000516670 106 ntBASIC3.8□□□□□ -1.8
PER3P56645 RNA5SP73-201ENST00000516744 108 ntBASIC3.8□□□□□ -1.8
PER3P56645 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.8□□□□□ -1.8
PER3P56645 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms