Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 MIR3199-2-201ENST00000636243 86 ntBASIC2.18□□□□□ -2.06
RFX3P48380 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
RFX3P48380 MTND5P29-201ENST00000458676 1807 ntBASIC2.18□□□□□ -2.06
RFX3P48380 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RFX3P48380 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
RFX3P48380 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.17□□□□□ -2.06
RFX3P48380 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
RFX3P48380 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.17□□□□□ -2.06
RFX3P48380 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.17□□□□□ -2.06
RFX3P48380 RNU6-278P-201ENST00000390945 109 ntBASIC2.17□□□□□ -2.06
RFX3P48380 AL359634.1-202ENST00000404721 284 ntBASIC2.17□□□□□ -2.06
RFX3P48380 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.17□□□□□ -2.06
RFX3P48380 RNA5SP508-201ENST00000411327 119 ntBASIC2.17□□□□□ -2.06
RFX3P48380 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.17□□□□□ -2.06
RFX3P48380 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.17□□□□□ -2.06
RFX3P48380 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.17□□□□□ -2.06
RFX3P48380 AL022400.1-201ENST00000423946 935 ntBASIC2.17□□□□□ -2.06
RFX3P48380 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.17□□□□□ -2.06
RFX3P48380 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.17□□□□□ -2.06
RFX3P48380 AC005094.1-201ENST00000440420 368 ntBASIC2.17□□□□□ -2.06
RFX3P48380 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.17□□□□□ -2.06
RFX3P48380 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.17□□□□□ -2.06
RFX3P48380 MRPL42P6-201ENST00000486397 371 ntBASIC2.17□□□□□ -2.06
RFX3P48380 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.17□□□□□ -2.06
RFX3P48380 RN7SKP258-201ENST00000517151 304 ntBASIC2.17□□□□□ -2.06
RFX3P48380 AC010186.2-204ENST00000537668 439 ntBASIC2.17□□□□□ -2.06
RFX3P48380 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.17□□□□□ -2.06
RFX3P48380 NACAP3-201ENST00000552100 481 ntBASIC2.17□□□□□ -2.06
RFX3P48380 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.17□□□□□ -2.06
RFX3P48380 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.17□□□□□ -2.06
RFX3P48380 AC105137.2-201ENST00000569073 466 ntBASIC2.17□□□□□ -2.06
RFX3P48380 MIR5571-201ENST00000577998 113 ntBASIC2.17□□□□□ -2.06
RFX3P48380 MIR3945-201ENST00000581853 98 ntBASIC2.17□□□□□ -2.06
RFX3P48380 AL021997.1-201ENST00000605757 193 ntBASIC2.17□□□□□ -2.06
RFX3P48380 SNORD14A-201ENST00000606526 91 ntBASIC2.17□□□□□ -2.06
RFX3P48380 AC116312.1-201ENST00000606841 314 ntBASIC2.17□□□□□ -2.06
RFX3P48380 AC092106.3-201ENST00000611308 722 ntBASIC2.17□□□□□ -2.06
RFX3P48380 AC025594.3-201ENST00000613068 790 ntBASIC2.17□□□□□ -2.06
RFX3P48380 AC025034.2-201ENST00000623264 286 ntBASIC2.17□□□□□ -2.06
RFX3P48380 AC079416.3-201ENST00000624479 549 ntBASIC2.17□□□□□ -2.06
RFX3P48380 CTSLP2-204ENST00000629029 392 ntBASIC2.17□□□□□ -2.06
RFX3P48380 AC243829.7-201ENST00000633081 225 ntBASIC2.17□□□□□ -2.06
RFX3P48380 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RFX3P48380 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
RFX3P48380 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RFX3P48380 RNA5SP289-201ENST00000362332 137 ntBASIC2.16□□□□□ -2.06
RFX3P48380 RNU6-1284P-201ENST00000363701 100 ntBASIC2.16□□□□□ -2.06
RFX3P48380 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
RFX3P48380 RNU6-920P-201ENST00000410926 92 ntBASIC2.16□□□□□ -2.06
RFX3P48380 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.16□□□□□ -2.06
RFX3P48380 HMGB1P11-201ENST00000413899 637 ntBASIC2.16□□□□□ -2.06
RFX3P48380 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.16□□□□□ -2.06
RFX3P48380 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.16□□□□□ -2.06
RFX3P48380 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RFX3P48380 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.16□□□□□ -2.06
RFX3P48380 MICF-203ENST00000432679 129 ntBASIC2.16□□□□□ -2.06
RFX3P48380 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.16□□□□□ -2.06
RFX3P48380 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.16□□□□□ -2.06
RFX3P48380 Z73417.1-201ENST00000447373 778 ntBASIC2.16□□□□□ -2.06
RFX3P48380 AC108059.3-201ENST00000456388 214 ntBASIC2.16□□□□□ -2.06
RFX3P48380 AC020699.1-201ENST00000505161 445 ntBASIC2.16□□□□□ -2.06
RFX3P48380 MTCYBP20-201ENST00000524239 1129 ntBASIC2.16□□□□□ -2.06
RFX3P48380 AP000907.2-201ENST00000530827 353 ntBASIC2.16□□□□□ -2.06
RFX3P48380 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.16□□□□□ -2.06
RFX3P48380 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RFX3P48380 AC021739.1-201ENST00000559631 174 ntBASIC2.16□□□□□ -2.06
RFX3P48380 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.16□□□□□ -2.06
RFX3P48380 AL031281.1-201ENST00000604049 488 ntBASIC2.16□□□□□ -2.06
RFX3P48380 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RFX3P48380 AL391262.2-201ENST00000622466 494 ntBASIC2.16□□□□□ -2.06
RFX3P48380 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.16□□□□□ -2.06
RFX3P48380 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RFX3P48380 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.16□□□□□ -2.06
RFX3P48380 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
RFX3P48380 Y_RNA.18-201ENST00000362461 102 ntBASIC2.15□□□□□ -2.07
RFX3P48380 SNORD113-6-201ENST00000363345 75 ntBASIC2.15□□□□□ -2.07
RFX3P48380 SNORA38-201ENST00000363946 132 ntBASIC2.15□□□□□ -2.07
RFX3P48380 RNU5A-8P-201ENST00000364102 114 ntBASIC2.15□□□□□ -2.07
RFX3P48380 RNU6-512P-201ENST00000364438 103 ntBASIC2.15□□□□□ -2.07
RFX3P48380 RNU4-28P-201ENST00000364739 141 ntBASIC2.15□□□□□ -2.07
RFX3P48380 RNU1-91P-201ENST00000364746 163 ntBASIC2.15□□□□□ -2.07
RFX3P48380 RNU2-68P-201ENST00000410878 191 ntBASIC2.15□□□□□ -2.07
RFX3P48380 AL008987.1-201ENST00000415528 237 ntBASIC2.15□□□□□ -2.07
RFX3P48380 RPL22P18-201ENST00000417197 377 ntBASIC2.15□□□□□ -2.07
RFX3P48380 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.15□□□□□ -2.07
RFX3P48380 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.15□□□□□ -2.07
RFX3P48380 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.15□□□□□ -2.07
RFX3P48380 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.15□□□□□ -2.07
RFX3P48380 LARP1BP3-201ENST00000437229 869 ntBASIC2.15□□□□□ -2.07
RFX3P48380 HMGN2P10-201ENST00000448085 265 ntBASIC2.15□□□□□ -2.07
RFX3P48380 MTATP6P7-201ENST00000453315 681 ntBASIC2.15□□□□□ -2.07
RFX3P48380 RPL37P6-201ENST00000460682 294 ntBASIC2.15□□□□□ -2.07
RFX3P48380 KLF3P2-201ENST00000465138 268 ntBASIC2.15□□□□□ -2.07
RFX3P48380 AC128713.1-201ENST00000471495 306 ntBASIC2.15□□□□□ -2.07
RFX3P48380 AC026801.1-201ENST00000497178 464 ntBASIC2.15□□□□□ -2.07
RFX3P48380 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.15□□□□□ -2.07
RFX3P48380 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
RFX3P48380 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.15□□□□□ -2.07
RFX3P48380 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.15□□□□□ -2.07
RFX3P48380 MTATP6P15-201ENST00000527233 835 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms