Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HOXD13P35453 RNU6-169P-201ENST00000365336 107 ntBASIC3.13□□□□□ -1.91
HOXD13P35453 SNORD116-9-201ENST00000384000 95 ntBASIC3.13□□□□□ -1.91
HOXD13P35453 SNORD116-2-201ENST00000384274 95 ntBASIC3.13□□□□□ -1.91
HOXD13P35453 SNORD116-3-201ENST00000384287 95 ntBASIC3.13□□□□□ -1.91
HOXD13P35453 SNORD116-7-201ENST00000384404 95 ntBASIC3.13□□□□□ -1.91
HOXD13P35453 SNORD116-5-201ENST00000384462 95 ntBASIC3.13□□□□□ -1.91
HOXD13P35453 SNORD116-6-201ENST00000384711 96 ntBASIC3.13□□□□□ -1.91
HOXD13P35453 AL031121.1-201ENST00000406553 254 ntBASIC3.13□□□□□ -1.91
HOXD13P35453 RNU2-49P-201ENST00000410666 184 ntBASIC3.13□□□□□ -1.91
HOXD13P35453 RNU6-248P-201ENST00000410720 107 ntBASIC3.13□□□□□ -1.91
HOXD13P35453 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXD13P35453 EEF1A1P41-201ENST00000414667 207 ntBASIC3.13□□□□□ -1.91
HOXD13P35453 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXD13P35453 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.13□□□□□ -1.91
HOXD13P35453 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.13□□□□□ -1.91
HOXD13P35453 BRK1P2-201ENST00000442875 223 ntBASIC3.13□□□□□ -1.91
HOXD13P35453 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXD13P35453 AC003071.1-201ENST00000451219 789 ntBASIC3.13□□□□□ -1.91
HOXD13P35453 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXD13P35453 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXD13P35453 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.13□□□□□ -1.91
HOXD13P35453 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXD13P35453 AC108078.2-201ENST00000510750 236 ntBASIC3.13□□□□□ -1.91
HOXD13P35453 SCGB1D5P-201ENST00000515134 247 ntBASIC3.13□□□□□ -1.91
HOXD13P35453 RNU6-703P-201ENST00000516946 107 ntBASIC3.13□□□□□ -1.91
HOXD13P35453 RNU6-410P-201ENST00000517006 107 ntBASIC3.13□□□□□ -1.91
HOXD13P35453 RNU6-1315P-201ENST00000517187 99 ntBASIC3.13□□□□□ -1.91
HOXD13P35453 AP003122.3-201ENST00000526316 255 ntBASIC3.13□□□□□ -1.91
HOXD13P35453 AC084851.1-201ENST00000529105 249 ntBASIC3.13□□□□□ -1.91
HOXD13P35453 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXD13P35453 AC074050.1-201ENST00000563247 211 ntBASIC3.13□□□□□ -1.91
HOXD13P35453 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXD13P35453 AL033523.1-201ENST00000605153 153 ntBASIC3.13□□□□□ -1.91
HOXD13P35453 AC090617.7-201ENST00000623952 126 ntBASIC3.13□□□□□ -1.91
HOXD13P35453 AC092593.1-201ENST00000515413 1815 ntBASIC3.13□□□□□ -1.91
HOXD13P35453 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXD13P35453 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HOXD13P35453 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HOXD13P35453 ADAM3A-203ENST00000461344 2157 ntBASIC3.12□□□□□ -1.91
HOXD13P35453 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HOXD13P35453 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
HOXD13P35453 AC000403.1-201ENST00000613696 3585 ntBASIC3.12□□□□□ -1.91
HOXD13P35453 RNU6-179P-201ENST00000363350 107 ntBASIC3.12□□□□□ -1.91
HOXD13P35453 Y_RNA.534-201ENST00000384599 112 ntBASIC3.12□□□□□ -1.91
HOXD13P35453 RNU6-750P-201ENST00000390946 107 ntBASIC3.12□□□□□ -1.91
HOXD13P35453 RNU6-387P-201ENST00000411331 105 ntBASIC3.12□□□□□ -1.91
HOXD13P35453 RNU6-195P-201ENST00000411352 109 ntBASIC3.12□□□□□ -1.91
HOXD13P35453 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXD13P35453 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXD13P35453 AL513477.1-202ENST00000417061 214 ntBASIC3.12□□□□□ -1.91
HOXD13P35453 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXD13P35453 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.12□□□□□ -1.91
HOXD13P35453 AL135938.1-201ENST00000443141 297 ntBASIC3.12□□□□□ -1.91
HOXD13P35453 KATNBL1P3-201ENST00000443475 909 ntBASIC3.12□□□□□ -1.91
HOXD13P35453 DPPA3P1-201ENST00000448050 469 ntBASIC3.12□□□□□ -1.91
HOXD13P35453 AC126389.1-201ENST00000477436 290 ntBASIC3.12□□□□□ -1.91
HOXD13P35453 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXD13P35453 AC139453.3-201ENST00000493276 369 ntBASIC3.12□□□□□ -1.91
HOXD13P35453 AC109927.2-201ENST00000506416 303 ntBASIC3.12□□□□□ -1.91
HOXD13P35453 ARL2BPP4-201ENST00000506854 471 ntBASIC3.12□□□□□ -1.91
HOXD13P35453 HIGD1AP13-201ENST00000509878 289 ntBASIC3.12□□□□□ -1.91
HOXD13P35453 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXD13P35453 OR5B19P-201ENST00000531766 928 ntBASIC3.12□□□□□ -1.91
HOXD13P35453 AL356057.1-201ENST00000533798 831 ntBASIC3.12□□□□□ -1.91
HOXD13P35453 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXD13P35453 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXD13P35453 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.12□□□□□ -1.91
HOXD13P35453 MIR4782-201ENST00000577987 79 ntBASIC3.12□□□□□ -1.91
HOXD13P35453 MIR1273C-201ENST00000578669 77 ntBASIC3.12□□□□□ -1.91
HOXD13P35453 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXD13P35453 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.12□□□□□ -1.91
HOXD13P35453 AC098848.2-201ENST00000588023 330 ntBASIC3.12□□□□□ -1.91
HOXD13P35453 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXD13P35453 AL158032.1-201ENST00000605401 106 ntBASIC3.12□□□□□ -1.91
HOXD13P35453 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.12□□□□□ -1.91
HOXD13P35453 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.12□□□□□ -1.91
HOXD13P35453 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.12□□□□□ -1.91
HOXD13P35453 AC138649.3-201ENST00000622154 254 ntBASIC3.12□□□□□ -1.91
HOXD13P35453 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.12□□□□□ -1.91
HOXD13P35453 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HOXD13P35453 AL021368.2-201ENST00000606125 5352 ntBASIC3.11□□□□□ -1.91
HOXD13P35453 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.11□□□□□ -1.91
HOXD13P35453 RNU6-851P-201ENST00000384565 107 ntBASIC3.11□□□□□ -1.91
HOXD13P35453 MIR512-1-201ENST00000384913 84 ntBASIC3.11□□□□□ -1.91
HOXD13P35453 AL590004.2-201ENST00000404787 371 ntBASIC3.11□□□□□ -1.91
HOXD13P35453 AC023141.4-201ENST00000412031 328 ntBASIC3.11□□□□□ -1.91
HOXD13P35453 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXD13P35453 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.11□□□□□ -1.91
HOXD13P35453 PIGFP2-201ENST00000421400 651 ntBASIC3.11□□□□□ -1.91
HOXD13P35453 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.11□□□□□ -1.91
HOXD13P35453 RPL31P35-201ENST00000431058 377 ntBASIC3.11□□□□□ -1.91
HOXD13P35453 GPR143P-201ENST00000434155 205 ntBASIC3.11□□□□□ -1.91
HOXD13P35453 AL353706.1-201ENST00000436728 494 ntBASIC3.11□□□□□ -1.91
HOXD13P35453 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.11□□□□□ -1.91
HOXD13P35453 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXD13P35453 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.11□□□□□ -1.91
HOXD13P35453 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXD13P35453 NIPA2P5-201ENST00000452282 464 ntBASIC3.11□□□□□ -1.91
HOXD13P35453 AC003982.1-202ENST00000469928 248 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms