Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC006445.1-201ENST00000491925 405 ntBASIC3.57□□□□□ -1.84
CIITAP33076 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.57□□□□□ -1.84
CIITAP33076 MTCO2P30-201ENST00000503662 364 ntBASIC3.57□□□□□ -1.84
CIITAP33076 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CIITAP33076 CUL1P1-201ENST00000509510 2425 ntBASIC3.57□□□□□ -1.84
CIITAP33076 AL359273.1-201ENST00000510918 627 ntBASIC3.57□□□□□ -1.84
CIITAP33076 RNU1-143P-201ENST00000516296 146 ntBASIC3.57□□□□□ -1.84
CIITAP33076 SNORA31.22-201ENST00000517204 135 ntBASIC3.57□□□□□ -1.84
CIITAP33076 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.57□□□□□ -1.84
CIITAP33076 AP005435.4-201ENST00000529514 284 ntBASIC3.57□□□□□ -1.84
CIITAP33076 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.57□□□□□ -1.84
CIITAP33076 MIR4775-201ENST00000581168 75 ntBASIC3.57□□□□□ -1.84
CIITAP33076 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.57□□□□□ -1.84
CIITAP33076 BNIP3P9-201ENST00000603714 553 ntBASIC3.57□□□□□ -1.84
CIITAP33076 LARP7P1-201ENST00000605576 316 ntBASIC3.57□□□□□ -1.84
CIITAP33076 U1.23-201ENST00000610293 146 ntBASIC3.57□□□□□ -1.84
CIITAP33076 RNU1-68P-201ENST00000615382 146 ntBASIC3.57□□□□□ -1.84
CIITAP33076 AL603758.1-201ENST00000618654 241 ntBASIC3.57□□□□□ -1.84
CIITAP33076 U1.39-201ENST00000621562 146 ntBASIC3.57□□□□□ -1.84
CIITAP33076 AP003122.6-201ENST00000623831 495 ntBASIC3.57□□□□□ -1.84
CIITAP33076 AC091903.1-201ENST00000624322 454 ntBASIC3.57□□□□□ -1.84
CIITAP33076 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.57□□□□□ -1.84
CIITAP33076 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.57□□□□□ -1.84
CIITAP33076 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CIITAP33076 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CIITAP33076 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CIITAP33076 ZNF807-201ENST00000328088 1707 ntBASIC3.56□□□□□ -1.84
CIITAP33076 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.56□□□□□ -1.84
CIITAP33076 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.56□□□□□ -1.84
CIITAP33076 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CIITAP33076 RNU6-188P-201ENST00000364207 107 ntBASIC3.56□□□□□ -1.84
CIITAP33076 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.56□□□□□ -1.84
CIITAP33076 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.56□□□□□ -1.84
CIITAP33076 MIR483-201ENST00000385070 76 ntBASIC3.56□□□□□ -1.84
CIITAP33076 MIR454-201ENST00000390180 115 ntBASIC3.56□□□□□ -1.84
CIITAP33076 RPL21P24-201ENST00000413752 448 ntBASIC3.56□□□□□ -1.84
CIITAP33076 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.56□□□□□ -1.84
CIITAP33076 AC114491.1-201ENST00000416095 246 ntBASIC3.56□□□□□ -1.84
CIITAP33076 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.56□□□□□ -1.84
CIITAP33076 YPEL5P1-201ENST00000419731 367 ntBASIC3.56□□□□□ -1.84
CIITAP33076 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.56□□□□□ -1.84
CIITAP33076 SEPT14P3-201ENST00000439401 183 ntBASIC3.56□□□□□ -1.84
CIITAP33076 MTND4P25-201ENST00000441039 533 ntBASIC3.56□□□□□ -1.84
CIITAP33076 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.56□□□□□ -1.84
CIITAP33076 AL732372.2-207ENST00000445840 183 ntBASIC3.56□□□□□ -1.84
CIITAP33076 DDX3P2-201ENST00000446138 111 ntBASIC3.56□□□□□ -1.84
CIITAP33076 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CIITAP33076 MTND3P10-201ENST00000450967 341 ntBASIC3.56□□□□□ -1.84
CIITAP33076 SEPT14P2-201ENST00000453405 183 ntBASIC3.56□□□□□ -1.84
CIITAP33076 AC010631.1-201ENST00000474150 156 ntBASIC3.56□□□□□ -1.84
CIITAP33076 AC108860.1-201ENST00000484521 383 ntBASIC3.56□□□□□ -1.84
CIITAP33076 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.56□□□□□ -1.84
CIITAP33076 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.56□□□□□ -1.84
CIITAP33076 AC026427.2-201ENST00000506228 536 ntBASIC3.56□□□□□ -1.84
CIITAP33076 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.56□□□□□ -1.84
CIITAP33076 SEPT14P4-201ENST00000513445 186 ntBASIC3.56□□□□□ -1.84
CIITAP33076 AC114781.4-201ENST00000513707 639 ntBASIC3.56□□□□□ -1.84
CIITAP33076 AC026801.2-201ENST00000515352 425 ntBASIC3.56□□□□□ -1.84
CIITAP33076 RNU7-51P-201ENST00000516560 62 ntBASIC3.56□□□□□ -1.84
CIITAP33076 SNORA70.24-201ENST00000517233 118 ntBASIC3.56□□□□□ -1.84
CIITAP33076 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.56□□□□□ -1.84
CIITAP33076 ERHP1-201ENST00000523006 310 ntBASIC3.56□□□□□ -1.84
CIITAP33076 FO082796.1-201ENST00000523795 183 ntBASIC3.56□□□□□ -1.84
CIITAP33076 AL138976.2-201ENST00000563989 694 ntBASIC3.56□□□□□ -1.84
CIITAP33076 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.56□□□□□ -1.84
CIITAP33076 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.56□□□□□ -1.84
CIITAP33076 AC005730.3-201ENST00000583067 366 ntBASIC3.56□□□□□ -1.84
CIITAP33076 UBL5P2-201ENST00000583788 219 ntBASIC3.56□□□□□ -1.84
CIITAP33076 AC008945.2-201ENST00000606056 604 ntBASIC3.56□□□□□ -1.84
CIITAP33076 AC002076.2-201ENST00000617362 122 ntBASIC3.56□□□□□ -1.84
CIITAP33076 AL354950.2-201ENST00000617939 290 ntBASIC3.56□□□□□ -1.84
CIITAP33076 SNORA50A-202ENST00000629536 136 ntBASIC3.56□□□□□ -1.84
CIITAP33076 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.56□□□□□ -1.84
CIITAP33076 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.56□□□□□ -1.84
CIITAP33076 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CIITAP33076 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
CIITAP33076 AC009812.4-201ENST00000569134 1805 ntBASIC3.56□□□□□ -1.84
CIITAP33076 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
CIITAP33076 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CIITAP33076 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
CIITAP33076 AL079305.1-201ENST00000623159 3008 ntBASIC3.55□□□□□ -1.84
CIITAP33076 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CIITAP33076 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CIITAP33076 SDAD1P2-201ENST00000441308 2028 ntBASIC3.55□□□□□ -1.84
CIITAP33076 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CIITAP33076 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CIITAP33076 RNU6-223P-201ENST00000362830 107 ntBASIC3.55□□□□□ -1.84
CIITAP33076 Y_RNA.255-201ENST00000364581 97 ntBASIC3.55□□□□□ -1.84
CIITAP33076 MIR491-201ENST00000384877 84 ntBASIC3.55□□□□□ -1.84
CIITAP33076 AL359634.1-202ENST00000404721 284 ntBASIC3.55□□□□□ -1.84
CIITAP33076 AL356776.1-201ENST00000406574 447 ntBASIC3.55□□□□□ -1.84
CIITAP33076 SNORA11.2-201ENST00000408318 127 ntBASIC3.55□□□□□ -1.84
CIITAP33076 RNU2-39P-201ENST00000410604 198 ntBASIC3.55□□□□□ -1.84
CIITAP33076 AC093106.2-201ENST00000428212 385 ntBASIC3.55□□□□□ -1.84
CIITAP33076 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.55□□□□□ -1.84
CIITAP33076 RPL23AP69-201ENST00000431134 458 ntBASIC3.55□□□□□ -1.84
CIITAP33076 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.55□□□□□ -1.84
CIITAP33076 SNRPEP8-201ENST00000442866 260 ntBASIC3.55□□□□□ -1.84
CIITAP33076 MTCO3P45-201ENST00000443036 613 ntBASIC3.55□□□□□ -1.84
CIITAP33076 AC073415.1-201ENST00000449240 153 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms