Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 AL138478.1-201ENST00000612252 832 ntBASIC1.26□□□□□ -2.21
SDC4P31431 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.26□□□□□ -2.21
SDC4P31431 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SDC4P31431 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.26□□□□□ -2.21
SDC4P31431 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SDC4P31431 RNU4-91P-201ENST00000364778 135 ntBASIC1.25□□□□□ -2.21
SDC4P31431 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SDC4P31431 AC004965.1-201ENST00000413033 213 ntBASIC1.25□□□□□ -2.21
SDC4P31431 BPY2DP-201ENST00000422208 265 ntBASIC1.25□□□□□ -2.21
SDC4P31431 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.25□□□□□ -2.21
SDC4P31431 COX7A2P2-201ENST00000505291 250 ntBASIC1.25□□□□□ -2.21
SDC4P31431 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.25□□□□□ -2.21
SDC4P31431 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.25□□□□□ -2.21
SDC4P31431 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.25□□□□□ -2.21
SDC4P31431 BPTFP1-201ENST00000579209 492 ntBASIC1.25□□□□□ -2.21
SDC4P31431 MIR4765-201ENST00000585007 77 ntBASIC1.25□□□□□ -2.21
SDC4P31431 PRR13P7-201ENST00000605538 430 ntBASIC1.25□□□□□ -2.21
SDC4P31431 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.25□□□□□ -2.21
SDC4P31431 Z99571.1-201ENST00000636677 394 ntBASIC1.25□□□□□ -2.21
SDC4P31431 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SDC4P31431 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.25□□□□□ -2.21
SDC4P31431 AL391987.6-201ENST00000305671 199 ntBASIC1.24□□□□□ -2.21
SDC4P31431 RNU6-252P-201ENST00000363232 107 ntBASIC1.24□□□□□ -2.21
SDC4P31431 RNU6-115P-201ENST00000364310 107 ntBASIC1.24□□□□□ -2.21
SDC4P31431 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
SDC4P31431 RNU6-140P-201ENST00000384566 108 ntBASIC1.24□□□□□ -2.21
SDC4P31431 BTF3L4P2-201ENST00000392798 346 ntBASIC1.24□□□□□ -2.21
SDC4P31431 RNU6-516P-201ENST00000411381 104 ntBASIC1.24□□□□□ -2.21
SDC4P31431 AC244453.4-201ENST00000419150 388 ntBASIC1.24□□□□□ -2.21
SDC4P31431 AC246680.2-201ENST00000422106 389 ntBASIC1.24□□□□□ -2.21
SDC4P31431 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.24□□□□□ -2.21
SDC4P31431 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.24□□□□□ -2.21
SDC4P31431 AC093422.3-201ENST00000428506 305 ntBASIC1.24□□□□□ -2.21
SDC4P31431 AC244035.1-201ENST00000430042 390 ntBASIC1.24□□□□□ -2.21
SDC4P31431 ZYG11AP1-201ENST00000430329 837 ntBASIC1.24□□□□□ -2.21
SDC4P31431 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.24□□□□□ -2.21
SDC4P31431 MTCO1P57-201ENST00000432182 261 ntBASIC1.24□□□□□ -2.21
SDC4P31431 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.24□□□□□ -2.21
SDC4P31431 MTND2P29-201ENST00000438595 412 ntBASIC1.24□□□□□ -2.21
SDC4P31431 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.24□□□□□ -2.21
SDC4P31431 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.24□□□□□ -2.21
SDC4P31431 MTND2P24-201ENST00000453434 806 ntBASIC1.24□□□□□ -2.21
SDC4P31431 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SDC4P31431 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.24□□□□□ -2.21
SDC4P31431 RPS20P22-201ENST00000473700 357 ntBASIC1.24□□□□□ -2.21
SDC4P31431 BLNK-209ENST00000495266 440 ntTSL 5 BASIC1.24□□□□□ -2.21
SDC4P31431 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SDC4P31431 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.24□□□□□ -2.21
SDC4P31431 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.24□□□□□ -2.21
SDC4P31431 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.24□□□□□ -2.21
SDC4P31431 uc_338.14-201ENST00000613162 166 ntBASIC1.24□□□□□ -2.21
SDC4P31431 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
SDC4P31431 AC110491.1-201ENST00000562191 2010 ntBASIC1.23□□□□□ -2.21
SDC4P31431 AC091812.1-201ENST00000432235 1948 ntBASIC1.23□□□□□ -2.21
SDC4P31431 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.23□□□□□ -2.21
SDC4P31431 RNU6-884P-201ENST00000363889 107 ntBASIC1.23□□□□□ -2.21
SDC4P31431 MIR518A2-201ENST00000384966 87 ntBASIC1.23□□□□□ -2.21
SDC4P31431 MIR150-201ENST00000385048 84 ntBASIC1.23□□□□□ -2.21
SDC4P31431 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.23□□□□□ -2.21
SDC4P31431 AL139098.1-201ENST00000407291 389 ntBASIC1.23□□□□□ -2.21
SDC4P31431 CCDC58P2-201ENST00000417131 366 ntBASIC1.23□□□□□ -2.21
SDC4P31431 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.23□□□□□ -2.21
SDC4P31431 AL592045.1-201ENST00000429867 352 ntBASIC1.23□□□□□ -2.21
SDC4P31431 RPS6P15-201ENST00000431996 751 ntBASIC1.23□□□□□ -2.21
SDC4P31431 OR9N1P-202ENST00000494289 481 ntBASIC1.23□□□□□ -2.21
SDC4P31431 AC114801.2-201ENST00000503825 781 ntBASIC1.23□□□□□ -2.21
SDC4P31431 RNA5SP112-201ENST00000515937 99 ntBASIC1.23□□□□□ -2.21
SDC4P31431 RNU6-237P-201ENST00000515985 71 ntBASIC1.23□□□□□ -2.21
SDC4P31431 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.23□□□□□ -2.21
SDC4P31431 AL132857.1-201ENST00000555180 708 ntBASIC1.23□□□□□ -2.21
SDC4P31431 AC233702.2-202ENST00000562547 291 ntBASIC1.23□□□□□ -2.21
SDC4P31431 AC092192.1-201ENST00000633154 1018 ntBASIC1.23□□□□□ -2.21
SDC4P31431 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
SDC4P31431 AL359854.1-201ENST00000614203 1594 ntBASIC1.22□□□□□ -2.21
SDC4P31431 RNU6-251P-201ENST00000363235 104 ntBASIC1.22□□□□□ -2.21
SDC4P31431 RNA5SP240-201ENST00000365355 128 ntBASIC1.22□□□□□ -2.21
SDC4P31431 RNU2-33P-201ENST00000410344 192 ntBASIC1.22□□□□□ -2.21
SDC4P31431 RPL30P13-201ENST00000418873 348 ntBASIC1.22□□□□□ -2.21
SDC4P31431 MTND5P25-201ENST00000430499 799 ntBASIC1.22□□□□□ -2.21
SDC4P31431 FABP5P14-201ENST00000437273 393 ntBASIC1.22□□□□□ -2.21
SDC4P31431 RPL32P14-201ENST00000463196 378 ntBASIC1.22□□□□□ -2.21
SDC4P31431 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.22□□□□□ -2.21
SDC4P31431 RN7SKP179-201ENST00000516126 217 ntBASIC1.22□□□□□ -2.21
SDC4P31431 RNU6-416P-201ENST00000516265 103 ntBASIC1.22□□□□□ -2.21
SDC4P31431 SNORD19.2-201ENST00000516978 73 ntBASIC1.22□□□□□ -2.21
SDC4P31431 AC095057.3-201ENST00000567102 1157 ntBASIC1.22□□□□□ -2.21
SDC4P31431 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.22□□□□□ -2.21
SDC4P31431 AL020997.3-201ENST00000602843 359 ntBASIC1.22□□□□□ -2.21
SDC4P31431 MIR6078-201ENST00000611069 100 ntBASIC1.22□□□□□ -2.21
SDC4P31431 AC009233.1-201ENST00000616477 371 ntBASIC1.22□□□□□ -2.21
SDC4P31431 AC090617.9-201ENST00000623751 147 ntBASIC1.22□□□□□ -2.21
SDC4P31431 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
SDC4P31431 MIR26B-201ENST00000362251 77 ntBASIC1.21□□□□□ -2.22
SDC4P31431 SNORA27.3-201ENST00000364937 134 ntBASIC1.21□□□□□ -2.22
SDC4P31431 RNU6-338P-201ENST00000383888 105 ntBASIC1.21□□□□□ -2.22
SDC4P31431 AL109755.1-201ENST00000401791 649 ntBASIC1.21□□□□□ -2.22
SDC4P31431 FGF7P8-201ENST00000402994 292 ntBASIC1.21□□□□□ -2.22
SDC4P31431 PSMA6P3-201ENST00000428242 164 ntBASIC1.21□□□□□ -2.22
SDC4P31431 AC005345.1-201ENST00000431868 217 ntBASIC1.21□□□□□ -2.22
SDC4P31431 HMGN2P10-201ENST00000448085 265 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms