Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.65□□□□□ -1.99
PTPN4P29074 MTND2P38-201ENST00000522536 667 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 RPS3AP4-201ENST00000555161 764 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 AL356432.3-201ENST00000568952 465 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.65□□□□□ -1.99
PTPN4P29074 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.65□□□□□ -1.99
PTPN4P29074 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.65□□□□□ -1.99
PTPN4P29074 AC104010.1-201ENST00000616889 150 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 AL449363.1-201ENST00000617815 186 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 AC022079.1-201ENST00000621546 602 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 AC078883.4-201ENST00000623218 367 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
PTPN4P29074 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.65□□□□□ -1.99
PTPN4P29074 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PTPN4P29074 MIR9-1-201ENST00000385198 89 ntBASIC2.64□□□□□ -1.99
PTPN4P29074 HMGN2P35-201ENST00000412164 270 ntBASIC2.64□□□□□ -1.99
PTPN4P29074 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.64□□□□□ -1.99
PTPN4P29074 AL139413.1-201ENST00000421309 217 ntBASIC2.64□□□□□ -1.99
PTPN4P29074 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.64□□□□□ -1.99
PTPN4P29074 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.64□□□□□ -1.99
PTPN4P29074 MED14P1-201ENST00000430517 648 ntBASIC2.64□□□□□ -1.99
PTPN4P29074 MTND1P30-201ENST00000441241 901 ntBASIC2.64□□□□□ -1.99
PTPN4P29074 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.64□□□□□ -1.99
PTPN4P29074 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.64□□□□□ -1.99
PTPN4P29074 RNA5SP402-201ENST00000517148 110 ntBASIC2.64□□□□□ -1.99
PTPN4P29074 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.64□□□□□ -1.99
PTPN4P29074 CLIC4P2-201ENST00000601934 717 ntBASIC2.64□□□□□ -1.99
PTPN4P29074 AL355598.1-201ENST00000604169 202 ntBASIC2.64□□□□□ -1.99
PTPN4P29074 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.64□□□□□ -1.99
PTPN4P29074 uc_338.12-201ENST00000616344 181 ntBASIC2.64□□□□□ -1.99
PTPN4P29074 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.64□□□□□ -1.99
PTPN4P29074 AC131280.1-202ENST00000624067 4211 ntBASIC2.64□□□□□ -1.99
PTPN4P29074 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.63□□□□□ -1.99
PTPN4P29074 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PTPN4P29074 RN7SKP226-201ENST00000364912 300 ntBASIC2.63□□□□□ -1.99
PTPN4P29074 RNY3P9-201ENST00000384727 106 ntBASIC2.63□□□□□ -1.99
PTPN4P29074 AL445529.1-201ENST00000398713 389 ntBASIC2.63□□□□□ -1.99
PTPN4P29074 AL138827.1-201ENST00000402666 306 ntBASIC2.63□□□□□ -1.99
PTPN4P29074 AL513475.1-201ENST00000406602 315 ntBASIC2.63□□□□□ -1.99
PTPN4P29074 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.63□□□□□ -1.99
PTPN4P29074 NDUFS5P4-201ENST00000412983 318 ntBASIC2.63□□□□□ -1.99
PTPN4P29074 AL592148.1-201ENST00000413568 445 ntBASIC2.63□□□□□ -1.99
PTPN4P29074 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.63□□□□□ -1.99
PTPN4P29074 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.63□□□□□ -1.99
PTPN4P29074 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.63□□□□□ -1.99
PTPN4P29074 AL445687.1-201ENST00000439946 251 ntBASIC2.63□□□□□ -1.99
PTPN4P29074 AP000797.1-201ENST00000478870 387 ntBASIC2.63□□□□□ -1.99
PTPN4P29074 AC105252.1-201ENST00000503089 286 ntBASIC2.63□□□□□ -1.99
PTPN4P29074 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.63□□□□□ -1.99
PTPN4P29074 AF131216.2-201ENST00000512316 564 ntBASIC2.63□□□□□ -1.99
PTPN4P29074 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.63□□□□□ -1.99
PTPN4P29074 AC109329.2-201ENST00000519658 482 ntBASIC2.63□□□□□ -1.99
PTPN4P29074 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.63□□□□□ -1.99
PTPN4P29074 MTND4LP18-201ENST00000526864 291 ntBASIC2.63□□□□□ -1.99
PTPN4P29074 AC011979.2-201ENST00000527568 352 ntBASIC2.63□□□□□ -1.99
PTPN4P29074 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.63□□□□□ -1.99
PTPN4P29074 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.63□□□□□ -1.99
PTPN4P29074 ZNF519P3-201ENST00000557158 1032 ntBASIC2.63□□□□□ -1.99
PTPN4P29074 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.63□□□□□ -1.99
PTPN4P29074 MIR5697-201ENST00000578045 78 ntBASIC2.63□□□□□ -1.99
PTPN4P29074 MIR3146-201ENST00000580367 79 ntBASIC2.63□□□□□ -1.99
PTPN4P29074 AC008088.1-201ENST00000580993 280 ntBASIC2.63□□□□□ -1.99
PTPN4P29074 MIR3117-201ENST00000584034 78 ntBASIC2.63□□□□□ -1.99
PTPN4P29074 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.63□□□□□ -1.99
PTPN4P29074 HMGN2P15-201ENST00000585707 270 ntBASIC2.63□□□□□ -1.99
PTPN4P29074 AC121247.2-201ENST00000604776 136 ntBASIC2.63□□□□□ -1.99
PTPN4P29074 AC105129.3-201ENST00000605455 485 ntBASIC2.63□□□□□ -1.99
PTPN4P29074 AL031775.1-201ENST00000607014 887 ntBASIC2.63□□□□□ -1.99
PTPN4P29074 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.63□□□□□ -1.99
PTPN4P29074 AC009159.1-201ENST00000618386 642 ntBASIC2.63□□□□□ -1.99
PTPN4P29074 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.63□□□□□ -1.99
PTPN4P29074 IGHVIII-44-202ENST00000636235 289 ntBASIC2.63□□□□□ -1.99
PTPN4P29074 AC010149.2-201ENST00000637608 315 ntBASIC2.63□□□□□ -1.99
PTPN4P29074 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PTPN4P29074 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.62□□□□□ -1.99
PTPN4P29074 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.62□□□□□ -1.99
PTPN4P29074 RNU6-859P-201ENST00000362728 107 ntBASIC2.62□□□□□ -1.99
PTPN4P29074 RNU6-1167P-201ENST00000363227 94 ntBASIC2.62□□□□□ -1.99
PTPN4P29074 RNU6-461P-201ENST00000364195 107 ntBASIC2.62□□□□□ -1.99
PTPN4P29074 RNU6-533P-201ENST00000384144 107 ntBASIC2.62□□□□□ -1.99
PTPN4P29074 SNORD115.1-201ENST00000391109 76 ntBASIC2.62□□□□□ -1.99
PTPN4P29074 RNU2-52P-201ENST00000410680 190 ntBASIC2.62□□□□□ -1.99
PTPN4P29074 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.62□□□□□ -1.99
PTPN4P29074 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.62□□□□□ -1.99
PTPN4P29074 ELOCP14-201ENST00000428070 331 ntBASIC2.62□□□□□ -1.99
PTPN4P29074 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.62□□□□□ -1.99
PTPN4P29074 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.62□□□□□ -1.99
PTPN4P29074 SNRPEP9-201ENST00000436794 238 ntBASIC2.62□□□□□ -1.99
PTPN4P29074 ELOCP7-201ENST00000439968 331 ntBASIC2.62□□□□□ -1.99
PTPN4P29074 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.62□□□□□ -1.99
PTPN4P29074 RPL36AP51-201ENST00000487216 318 ntBASIC2.62□□□□□ -1.99
PTPN4P29074 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PTPN4P29074 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.62□□□□□ -1.99
PTPN4P29074 AC008716.1-201ENST00000511084 513 ntBASIC2.62□□□□□ -1.99
PTPN4P29074 AC114781.4-201ENST00000513707 639 ntBASIC2.62□□□□□ -1.99
PTPN4P29074 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.62□□□□□ -1.99
PTPN4P29074 MIR4293-201ENST00000584305 78 ntBASIC2.62□□□□□ -1.99
PTPN4P29074 AC135507.1-201ENST00000607214 561 ntBASIC2.62□□□□□ -1.99
PTPN4P29074 AL391813.2-201ENST00000609113 322 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms