Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC091516.1-201ENST00000549191 703 ntBASIC4.14□□□□□ -1.75
COL6A2P12110 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.14□□□□□ -1.75
COL6A2P12110 AL117187.1-201ENST00000555482 181 ntBASIC4.14□□□□□ -1.75
COL6A2P12110 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.14□□□□□ -1.75
COL6A2P12110 AL157871.3-201ENST00000557231 293 ntBASIC4.14□□□□□ -1.75
COL6A2P12110 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.14□□□□□ -1.75
COL6A2P12110 AC068790.4-201ENST00000602474 263 ntBASIC4.14□□□□□ -1.75
COL6A2P12110 ELOCP5-201ENST00000604924 333 ntBASIC4.14□□□□□ -1.75
COL6A2P12110 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.14□□□□□ -1.75
COL6A2P12110 AC023043.4-201ENST00000612081 449 ntBASIC4.14□□□□□ -1.75
COL6A2P12110 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
COL6A2P12110 MFSD8-216ENST00000641147 4009 ntBASIC4.13□□□□□ -1.75
COL6A2P12110 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL6A2P12110 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL6A2P12110 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
COL6A2P12110 RNA5SP322-201ENST00000363617 119 ntBASIC4.13□□□□□ -1.75
COL6A2P12110 Y_RNA.324-201ENST00000365165 102 ntBASIC4.13□□□□□ -1.75
COL6A2P12110 RNU6-596P-201ENST00000365395 98 ntBASIC4.13□□□□□ -1.75
COL6A2P12110 RNU6-1181P-201ENST00000384191 106 ntBASIC4.13□□□□□ -1.75
COL6A2P12110 Y_RNA.473-201ENST00000384333 102 ntBASIC4.13□□□□□ -1.75
COL6A2P12110 SNORA41-201ENST00000384675 132 ntBASIC4.13□□□□□ -1.75
COL6A2P12110 MIR1290-201ENST00000408735 78 ntBASIC4.13□□□□□ -1.75
COL6A2P12110 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.13□□□□□ -1.75
COL6A2P12110 C4BPAP2-201ENST00000428434 478 ntBASIC4.13□□□□□ -1.75
COL6A2P12110 RPL23AP1-201ENST00000428990 471 ntBASIC4.13□□□□□ -1.75
COL6A2P12110 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.13□□□□□ -1.75
COL6A2P12110 AL356867.1-201ENST00000429623 299 ntBASIC4.13□□□□□ -1.75
COL6A2P12110 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.13□□□□□ -1.75
COL6A2P12110 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.13□□□□□ -1.75
COL6A2P12110 IPO7P1-201ENST00000442031 636 ntBASIC4.13□□□□□ -1.75
COL6A2P12110 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.13□□□□□ -1.75
COL6A2P12110 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.13□□□□□ -1.75
COL6A2P12110 RPL23AP31-201ENST00000456160 467 ntBASIC4.13□□□□□ -1.75
COL6A2P12110 AP000873.1-201ENST00000463987 400 ntBASIC4.13□□□□□ -1.75
COL6A2P12110 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.13□□□□□ -1.75
COL6A2P12110 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.13□□□□□ -1.75
COL6A2P12110 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.13□□□□□ -1.75
COL6A2P12110 AP003122.3-201ENST00000526316 255 ntBASIC4.13□□□□□ -1.75
COL6A2P12110 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL6A2P12110 AC084851.1-201ENST00000529105 249 ntBASIC4.13□□□□□ -1.75
COL6A2P12110 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.13□□□□□ -1.75
COL6A2P12110 AP004242.1-201ENST00000533701 349 ntBASIC4.13□□□□□ -1.75
COL6A2P12110 TRAV37-201ENST00000553906 342 ntBASIC4.13□□□□□ -1.75
COL6A2P12110 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.13□□□□□ -1.75
COL6A2P12110 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.13□□□□□ -1.75
COL6A2P12110 AC074050.1-201ENST00000563247 211 ntBASIC4.13□□□□□ -1.75
COL6A2P12110 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.13□□□□□ -1.75
COL6A2P12110 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.13□□□□□ -1.75
COL6A2P12110 NUTF2P8-201ENST00000604593 363 ntBASIC4.13□□□□□ -1.75
COL6A2P12110 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.13□□□□□ -1.75
COL6A2P12110 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL6A2P12110 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL6A2P12110 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.12□□□□□ -1.75
COL6A2P12110 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL6A2P12110 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.12□□□□□ -1.75
COL6A2P12110 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
COL6A2P12110 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.12□□□□□ -1.75
COL6A2P12110 Y_RNA.33-201ENST00000362591 102 ntBASIC4.12□□□□□ -1.75
COL6A2P12110 Y_RNA.80-201ENST00000362996 102 ntBASIC4.12□□□□□ -1.75
COL6A2P12110 RNU1-115P-201ENST00000365329 160 ntBASIC4.12□□□□□ -1.75
COL6A2P12110 RNY1P14-201ENST00000384426 108 ntBASIC4.12□□□□□ -1.75
COL6A2P12110 RNU6-306P-201ENST00000384617 107 ntBASIC4.12□□□□□ -1.75
COL6A2P12110 RNU6-1179P-201ENST00000384667 107 ntBASIC4.12□□□□□ -1.75
COL6A2P12110 RNU6-1106P-201ENST00000390845 107 ntBASIC4.12□□□□□ -1.75
COL6A2P12110 Z98941.1-201ENST00000407764 100 ntBASIC4.12□□□□□ -1.75
COL6A2P12110 AC097713.2-201ENST00000430199 356 ntBASIC4.12□□□□□ -1.75
COL6A2P12110 AC011742.1-201ENST00000431448 434 ntBASIC4.12□□□□□ -1.75
COL6A2P12110 RPL23AP46-201ENST00000438548 490 ntBASIC4.12□□□□□ -1.75
COL6A2P12110 RANP8-201ENST00000444720 713 ntBASIC4.12□□□□□ -1.75
COL6A2P12110 FABP5P15-201ENST00000453566 214 ntBASIC4.12□□□□□ -1.75
COL6A2P12110 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.12□□□□□ -1.75
COL6A2P12110 RNU7-187P-201ENST00000458985 68 ntBASIC4.12□□□□□ -1.75
COL6A2P12110 RPL9P32-201ENST00000464118 620 ntBASIC4.12□□□□□ -1.75
COL6A2P12110 RN7SL271P-201ENST00000487601 295 ntBASIC4.12□□□□□ -1.75
COL6A2P12110 SNORA31.8-201ENST00000516327 108 ntBASIC4.12□□□□□ -1.75
COL6A2P12110 IGKV2D-23-201ENST00000518179 286 ntBASIC4.12□□□□□ -1.75
COL6A2P12110 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.12□□□□□ -1.75
COL6A2P12110 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.12□□□□□ -1.75
COL6A2P12110 OR1M4P-201ENST00000589199 287 ntBASIC4.12□□□□□ -1.75
COL6A2P12110 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL6A2P12110 AL132822.1-201ENST00000617063 513 ntBASIC4.12□□□□□ -1.75
COL6A2P12110 AL732372.2-225ENST00000642124 456 ntBASIC4.12□□□□□ -1.75
COL6A2P12110 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL6A2P12110 MTND5P1-201ENST00000445440 1375 ntBASIC4.12□□□□□ -1.75
COL6A2P12110 ZNF807-201ENST00000328088 1707 ntBASIC4.12□□□□□ -1.75
COL6A2P12110 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.12□□□□□ -1.75
COL6A2P12110 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL6A2P12110 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL6A2P12110 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.11□□□□□ -1.75
COL6A2P12110 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
COL6A2P12110 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
COL6A2P12110 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
COL6A2P12110 SNORA62-201ENST00000365493 153 ntBASIC4.11□□□□□ -1.75
COL6A2P12110 RNU6-842P-201ENST00000384269 107 ntBASIC4.11□□□□□ -1.75
COL6A2P12110 RNA5SP36-201ENST00000410197 133 ntBASIC4.11□□□□□ -1.75
COL6A2P12110 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.11□□□□□ -1.75
COL6A2P12110 AL158156.1-201ENST00000422509 473 ntBASIC4.11□□□□□ -1.75
COL6A2P12110 RPL27AP8-201ENST00000424277 446 ntBASIC4.11□□□□□ -1.75
COL6A2P12110 AC008267.5-201ENST00000424928 265 ntBASIC4.11□□□□□ -1.75
COL6A2P12110 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms