Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CD28P10747 AC022447.1-201ENST00000515358 464 ntBASIC1.79□□□□□ -2.12
CD28P10747 RNU6-311P-201ENST00000516224 102 ntBASIC1.79□□□□□ -2.12
CD28P10747 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.79□□□□□ -2.12
CD28P10747 MTND2P32-201ENST00000521584 1038 ntBASIC1.79□□□□□ -2.12
CD28P10747 EEF1A1P37-201ENST00000522748 715 ntBASIC1.79□□□□□ -2.12
CD28P10747 DEFB108A-201ENST00000530110 222 ntBASIC1.79□□□□□ -2.12
CD28P10747 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.79□□□□□ -2.12
CD28P10747 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CD28P10747 MRPS36P5-201ENST00000551909 298 ntBASIC1.79□□□□□ -2.12
CD28P10747 RPS3AP4-201ENST00000555161 764 ntBASIC1.79□□□□□ -2.12
CD28P10747 AC068790.3-201ENST00000602988 553 ntBASIC1.79□□□□□ -2.12
CD28P10747 AL391813.1-201ENST00000603098 260 ntBASIC1.79□□□□□ -2.12
CD28P10747 AC112187.2-201ENST00000604345 283 ntBASIC1.79□□□□□ -2.12
CD28P10747 AL450336.1-201ENST00000605180 586 ntBASIC1.79□□□□□ -2.12
CD28P10747 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.79□□□□□ -2.12
CD28P10747 AC067747.1-201ENST00000608026 250 ntBASIC1.79□□□□□ -2.12
CD28P10747 AC104237.2-201ENST00000612456 443 ntBASIC1.79□□□□□ -2.12
CD28P10747 DUSP12P1-201ENST00000612874 516 ntBASIC1.79□□□□□ -2.12
CD28P10747 AC011890.2-201ENST00000613393 294 ntBASIC1.79□□□□□ -2.12
CD28P10747 AC068057.2-201ENST00000624047 895 ntBASIC1.79□□□□□ -2.12
CD28P10747 MIR7515-201ENST00000637837 67 ntBASIC1.79□□□□□ -2.12
CD28P10747 AC104454.1-201ENST00000421341 1401 ntBASIC1.79□□□□□ -2.12
CD28P10747 AC092125.1-201ENST00000562568 1995 ntBASIC1.79□□□□□ -2.12
CD28P10747 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CD28P10747 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CD28P10747 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.78□□□□□ -2.12
CD28P10747 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CD28P10747 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CD28P10747 U8.8-201ENST00000365399 135 ntBASIC1.78□□□□□ -2.12
CD28P10747 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
CD28P10747 MIR144-201ENST00000384886 86 ntBASIC1.78□□□□□ -2.12
CD28P10747 RNU4-26P-201ENST00000410270 107 ntBASIC1.78□□□□□ -2.12
CD28P10747 AC078974.1-201ENST00000411597 223 ntBASIC1.78□□□□□ -2.12
CD28P10747 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.78□□□□□ -2.12
CD28P10747 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.78□□□□□ -2.12
CD28P10747 MED14P1-201ENST00000430517 648 ntBASIC1.78□□□□□ -2.12
CD28P10747 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.78□□□□□ -2.12
CD28P10747 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.78□□□□□ -2.12
CD28P10747 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.78□□□□□ -2.12
CD28P10747 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.78□□□□□ -2.12
CD28P10747 MTATP6P7-201ENST00000453315 681 ntBASIC1.78□□□□□ -2.12
CD28P10747 CECR9-201ENST00000453421 199 ntBASIC1.78□□□□□ -2.12
CD28P10747 ANKRD26P4-201ENST00000455755 950 ntBASIC1.78□□□□□ -2.12
CD28P10747 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.78□□□□□ -2.12
CD28P10747 TRBV1-201ENST00000476502 284 ntBASIC1.78□□□□□ -2.12
CD28P10747 EIF4EP3-201ENST00000498782 656 ntBASIC1.78□□□□□ -2.12
CD28P10747 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CD28P10747 AC104685.1-201ENST00000502445 371 ntBASIC1.78□□□□□ -2.12
CD28P10747 NDUFB4P2-201ENST00000509515 391 ntBASIC1.78□□□□□ -2.12
CD28P10747 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.78□□□□□ -2.12
CD28P10747 RNU6-390P-201ENST00000516259 103 ntBASIC1.78□□□□□ -2.12
CD28P10747 SNORD19.2-201ENST00000516978 73 ntBASIC1.78□□□□□ -2.12
CD28P10747 RNA5SP402-201ENST00000517148 110 ntBASIC1.78□□□□□ -2.12
CD28P10747 COX6CP5-201ENST00000527162 228 ntBASIC1.78□□□□□ -2.12
CD28P10747 RANP3-201ENST00000530970 276 ntBASIC1.78□□□□□ -2.12
CD28P10747 AC013828.2-201ENST00000532487 235 ntBASIC1.78□□□□□ -2.12
CD28P10747 NACAP3-201ENST00000552100 481 ntBASIC1.78□□□□□ -2.12
CD28P10747 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.78□□□□□ -2.12
CD28P10747 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.78□□□□□ -2.12
CD28P10747 AC026464.5-201ENST00000562497 722 ntBASIC1.78□□□□□ -2.12
CD28P10747 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.78□□□□□ -2.12
CD28P10747 AC105137.2-201ENST00000569073 466 ntBASIC1.78□□□□□ -2.12
CD28P10747 MIR3117-201ENST00000584034 78 ntBASIC1.78□□□□□ -2.12
CD28P10747 AP000403.1-201ENST00000603349 851 ntBASIC1.78□□□□□ -2.12
CD28P10747 AL356280.1-201ENST00000603614 379 ntBASIC1.78□□□□□ -2.12
CD28P10747 DPPA3P3-201ENST00000603842 430 ntBASIC1.78□□□□□ -2.12
CD28P10747 AC107952.2-201ENST00000606048 486 ntBASIC1.78□□□□□ -2.12
CD28P10747 AC024933.1-201ENST00000608472 348 ntBASIC1.78□□□□□ -2.12
CD28P10747 AC103710.1-201ENST00000610003 901 ntBASIC1.78□□□□□ -2.12
CD28P10747 AC016597.2-201ENST00000613256 341 ntBASIC1.78□□□□□ -2.12
CD28P10747 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.78□□□□□ -2.12
CD28P10747 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
CD28P10747 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.78□□□□□ -2.13
CD28P10747 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.78□□□□□ -2.13
CD28P10747 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.77□□□□□ -2.13
CD28P10747 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CD28P10747 AC010889.1-201ENST00000566193 2666 ntBASIC1.77□□□□□ -2.13
CD28P10747 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.77□□□□□ -2.13
CD28P10747 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.77□□□□□ -2.13
CD28P10747 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.77□□□□□ -2.13
CD28P10747 MIR21-201ENST00000362134 72 ntBASIC1.77□□□□□ -2.13
CD28P10747 RNU6-14P-201ENST00000384630 106 ntBASIC1.77□□□□□ -2.13
CD28P10747 RNU6-1072P-201ENST00000384703 107 ntBASIC1.77□□□□□ -2.13
CD28P10747 RNU6-443P-201ENST00000384780 107 ntBASIC1.77□□□□□ -2.13
CD28P10747 RN7SKP32-201ENST00000410167 303 ntBASIC1.77□□□□□ -2.13
CD28P10747 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.77□□□□□ -2.13
CD28P10747 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.77□□□□□ -2.13
CD28P10747 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.77□□□□□ -2.13
CD28P10747 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.77□□□□□ -2.13
CD28P10747 AL606662.1-201ENST00000445763 553 ntBASIC1.77□□□□□ -2.13
CD28P10747 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.77□□□□□ -2.13
CD28P10747 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.77□□□□□ -2.13
CD28P10747 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.77□□□□□ -2.13
CD28P10747 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.77□□□□□ -2.13
CD28P10747 AC108059.3-201ENST00000456388 214 ntBASIC1.77□□□□□ -2.13
CD28P10747 SNORD11.1-201ENST00000459482 85 ntBASIC1.77□□□□□ -2.13
CD28P10747 RBM43P1-201ENST00000476891 1081 ntBASIC1.77□□□□□ -2.13
CD28P10747 GTF2IP9-201ENST00000502460 301 ntBASIC1.77□□□□□ -2.13
CD28P10747 AC034244.1-201ENST00000507687 207 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms