Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 MIR450B-201ENST00000401182 78 ntBASIC5.13□□□□□ -1.59
NEFMP07197 AL590704.1-201ENST00000402856 794 ntBASIC5.13□□□□□ -1.59
NEFMP07197 RNU6-516P-201ENST00000411381 104 ntBASIC5.13□□□□□ -1.59
NEFMP07197 RHEBP3-201ENST00000411920 351 ntBASIC5.13□□□□□ -1.59
NEFMP07197 RPL31P2-201ENST00000413849 377 ntBASIC5.13□□□□□ -1.59
NEFMP07197 AC096644.2-201ENST00000429278 159 ntBASIC5.13□□□□□ -1.59
NEFMP07197 RPL12P25-201ENST00000455592 494 ntBASIC5.13□□□□□ -1.59
NEFMP07197 SCARNA18-201ENST00000459004 134 ntBASIC5.13□□□□□ -1.59
NEFMP07197 RPL37P6-202ENST00000464216 403 ntBASIC5.13□□□□□ -1.59
NEFMP07197 AC128713.1-201ENST00000471495 306 ntBASIC5.13□□□□□ -1.59
NEFMP07197 RPS27AP1-201ENST00000475545 471 ntBASIC5.13□□□□□ -1.59
NEFMP07197 RPL21P93-201ENST00000480465 489 ntBASIC5.13□□□□□ -1.59
NEFMP07197 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.13□□□□□ -1.59
NEFMP07197 AC108078.2-201ENST00000510750 236 ntBASIC5.13□□□□□ -1.59
NEFMP07197 RNU6-1213P-201ENST00000517075 94 ntBASIC5.13□□□□□ -1.59
NEFMP07197 RANP3-201ENST00000530970 276 ntBASIC5.13□□□□□ -1.59
NEFMP07197 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.13□□□□□ -1.59
NEFMP07197 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.13□□□□□ -1.59
NEFMP07197 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.13□□□□□ -1.59
NEFMP07197 AC011890.2-201ENST00000613393 294 ntBASIC5.13□□□□□ -1.59
NEFMP07197 AL355365.1-201ENST00000616480 294 ntBASIC5.13□□□□□ -1.59
NEFMP07197 AC007485.1-201ENST00000616755 206 ntBASIC5.13□□□□□ -1.59
NEFMP07197 PISRT1.1-201ENST00000616930 107 ntBASIC5.13□□□□□ -1.59
NEFMP07197 FP236240.3-201ENST00000623061 327 ntBASIC5.13□□□□□ -1.59
NEFMP07197 AC034229.5-201ENST00000624258 185 ntBASIC5.13□□□□□ -1.59
NEFMP07197 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NEFMP07197 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.13□□□□□ -1.59
NEFMP07197 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC5.13□□□□□ -1.59
NEFMP07197 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
NEFMP07197 ZNF33CP-201ENST00000432492 2030 ntBASIC5.13□□□□□ -1.59
NEFMP07197 IPO8P1-201ENST00000455509 3109 ntBASIC5.12□□□□□ -1.59
NEFMP07197 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NEFMP07197 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC5.12□□□□□ -1.59
NEFMP07197 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NEFMP07197 RNU6-562P-201ENST00000362731 107 ntBASIC5.12□□□□□ -1.59
NEFMP07197 RNU6-890P-201ENST00000384121 107 ntBASIC5.12□□□□□ -1.59
NEFMP07197 Y_RNA.463-201ENST00000384271 102 ntBASIC5.12□□□□□ -1.59
NEFMP07197 RPL30P2-201ENST00000414021 291 ntBASIC5.12□□□□□ -1.59
NEFMP07197 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC5.12□□□□□ -1.59
NEFMP07197 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.12□□□□□ -1.59
NEFMP07197 PPIAP3-201ENST00000450588 505 ntBASIC5.12□□□□□ -1.59
NEFMP07197 AC092451.1-201ENST00000480211 153 ntBASIC5.12□□□□□ -1.59
NEFMP07197 RN7SL283P-201ENST00000489055 303 ntBASIC5.12□□□□□ -1.59
NEFMP07197 RPL31P61-201ENST00000496160 376 ntBASIC5.12□□□□□ -1.59
NEFMP07197 RPL23AP55-201ENST00000498163 452 ntBASIC5.12□□□□□ -1.59
NEFMP07197 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.12□□□□□ -1.59
NEFMP07197 AC026726.1-201ENST00000512859 601 ntBASIC5.12□□□□□ -1.59
NEFMP07197 HMGN1P28-201ENST00000521340 364 ntBASIC5.12□□□□□ -1.59
NEFMP07197 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.12□□□□□ -1.59
NEFMP07197 AC106782.4-201ENST00000568264 210 ntBASIC5.12□□□□□ -1.59
NEFMP07197 MYL12BP1-201ENST00000569826 507 ntBASIC5.12□□□□□ -1.59
NEFMP07197 MIR4293-201ENST00000584305 78 ntBASIC5.12□□□□□ -1.59
NEFMP07197 BNIP3P16-201ENST00000589779 534 ntBASIC5.12□□□□□ -1.59
NEFMP07197 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.12□□□□□ -1.59
NEFMP07197 GABPAP-201ENST00000419271 1356 ntBASIC5.12□□□□□ -1.59
NEFMP07197 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
NEFMP07197 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.12□□□□□ -1.59
NEFMP07197 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NEFMP07197 RNVU1-3-201ENST00000364313 161 ntBASIC5.11□□□□□ -1.59
NEFMP07197 RNU6-1127P-201ENST00000384580 107 ntBASIC5.11□□□□□ -1.59
NEFMP07197 RNU6-1222P-201ENST00000384615 107 ntBASIC5.11□□□□□ -1.59
NEFMP07197 Y_RNA.556-201ENST00000384677 113 ntBASIC5.11□□□□□ -1.59
NEFMP07197 U3.29-201ENST00000391296 212 ntBASIC5.11□□□□□ -1.59
NEFMP07197 RNU6ATAC-201ENST00000408749 126 ntBASIC5.11□□□□□ -1.59
NEFMP07197 RN7SKP156-201ENST00000410308 342 ntBASIC5.11□□□□□ -1.59
NEFMP07197 CYCSP19-201ENST00000411715 316 ntBASIC5.11□□□□□ -1.59
NEFMP07197 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.11□□□□□ -1.59
NEFMP07197 AC017083.1-201ENST00000428093 483 ntBASIC5.11□□□□□ -1.59
NEFMP07197 AC087650.1-201ENST00000431445 468 ntBASIC5.11□□□□□ -1.59
NEFMP07197 RPL21P112-201ENST00000434403 463 ntBASIC5.11□□□□□ -1.59
NEFMP07197 RPS15AP27-201ENST00000449183 343 ntBASIC5.11□□□□□ -1.59
NEFMP07197 TRBV1-201ENST00000476502 284 ntBASIC5.11□□□□□ -1.59
NEFMP07197 HMGB1P30-201ENST00000492455 606 ntBASIC5.11□□□□□ -1.59
NEFMP07197 AC116337.1-201ENST00000509680 687 ntBASIC5.11□□□□□ -1.59
NEFMP07197 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.11□□□□□ -1.59
NEFMP07197 RNU2-58P-201ENST00000516403 183 ntBASIC5.11□□□□□ -1.59
NEFMP07197 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NEFMP07197 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.11□□□□□ -1.59
NEFMP07197 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC5.11□□□□□ -1.59
NEFMP07197 MIR1254-2-201ENST00000579553 63 ntBASIC5.11□□□□□ -1.59
NEFMP07197 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.11□□□□□ -1.59
NEFMP07197 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.11□□□□□ -1.59
NEFMP07197 AC073539.2-201ENST00000597113 165 ntBASIC5.11□□□□□ -1.59
NEFMP07197 ATP5A1P2-202ENST00000616464 443 ntBASIC5.11□□□□□ -1.59
NEFMP07197 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NEFMP07197 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NEFMP07197 MTND5P30-201ENST00000452896 1731 ntBASIC5.11□□□□□ -1.59
NEFMP07197 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
NEFMP07197 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.1□□□□□ -1.59
NEFMP07197 IDE-202ENST00000371581 4480 ntTSL 2 BASIC5.1□□□□□ -1.59
NEFMP07197 RNU6-1284P-201ENST00000363701 100 ntBASIC5.1□□□□□ -1.59
NEFMP07197 RNU6-128P-201ENST00000383976 107 ntBASIC5.1□□□□□ -1.59
NEFMP07197 Y_RNA.574-201ENST00000384766 95 ntBASIC5.1□□□□□ -1.59
NEFMP07197 MIR199A2-201ENST00000385289 110 ntBASIC5.1□□□□□ -1.59
NEFMP07197 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NEFMP07197 SNORA75.6-201ENST00000391318 127 ntBASIC5.1□□□□□ -1.59
NEFMP07197 AL109755.1-201ENST00000401791 649 ntBASIC5.1□□□□□ -1.59
NEFMP07197 AL139247.1-201ENST00000422768 325 ntBASIC5.1□□□□□ -1.59
NEFMP07197 AC093151.1-201ENST00000427711 313 ntBASIC5.1□□□□□ -1.59
NEFMP07197 AC007389.2-201ENST00000434630 306 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 209.4 ms