Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.05□□□□□ -2.24
TNFP01375 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.05□□□□□ -2.24
TNFP01375 AC092192.1-201ENST00000633154 1018 ntBASIC1.05□□□□□ -2.24
TNFP01375 AC097655.1-201ENST00000635075 318 ntBASIC1.05□□□□□ -2.24
TNFP01375 Z99571.1-201ENST00000636677 394 ntBASIC1.05□□□□□ -2.24
TNFP01375 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
TNFP01375 ZNF29P-201ENST00000225587 168 ntBASIC1.04□□□□□ -2.24
TNFP01375 Y_RNA.116-201ENST00000363292 103 ntBASIC1.04□□□□□ -2.24
TNFP01375 RNU6-338P-201ENST00000383888 105 ntBASIC1.04□□□□□ -2.24
TNFP01375 RNU6-748P-201ENST00000384648 107 ntBASIC1.04□□□□□ -2.24
TNFP01375 MIR649-201ENST00000384843 97 ntBASIC1.04□□□□□ -2.24
TNFP01375 MIR518E-201ENST00000385252 88 ntBASIC1.04□□□□□ -2.24
TNFP01375 U6atac.2-201ENST00000408644 118 ntBASIC1.04□□□□□ -2.24
TNFP01375 RNU2-63P-201ENST00000410792 194 ntBASIC1.04□□□□□ -2.24
TNFP01375 AC096649.2-201ENST00000416186 393 ntBASIC1.04□□□□□ -2.24
TNFP01375 RAB11AP1-201ENST00000442978 646 ntBASIC1.04□□□□□ -2.24
TNFP01375 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.04□□□□□ -2.24
TNFP01375 RPL31P58-201ENST00000469001 379 ntBASIC1.04□□□□□ -2.24
TNFP01375 RPS23P4-201ENST00000487908 423 ntBASIC1.04□□□□□ -2.24
TNFP01375 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.04□□□□□ -2.24
TNFP01375 RNA5SP165-201ENST00000517142 115 ntBASIC1.04□□□□□ -2.24
TNFP01375 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.04□□□□□ -2.24
TNFP01375 AP000907.2-201ENST00000530827 353 ntBASIC1.04□□□□□ -2.24
TNFP01375 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.04□□□□□ -2.24
TNFP01375 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.04□□□□□ -2.24
TNFP01375 AC022254.1-201ENST00000567857 235 ntBASIC1.04□□□□□ -2.24
TNFP01375 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.04□□□□□ -2.24
TNFP01375 AP001269.3-201ENST00000588718 329 ntBASIC1.04□□□□□ -2.24
TNFP01375 AP000403.1-201ENST00000603349 851 ntBASIC1.04□□□□□ -2.24
TNFP01375 AL138963.2-201ENST00000605137 226 ntBASIC1.04□□□□□ -2.24
TNFP01375 AL138478.1-201ENST00000612252 832 ntBASIC1.04□□□□□ -2.24
TNFP01375 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.04□□□□□ -2.24
TNFP01375 MTND5P30-201ENST00000452896 1731 ntBASIC1.03□□□□□ -2.24
TNFP01375 MIR518A2-201ENST00000384966 87 ntBASIC1.03□□□□□ -2.24
TNFP01375 MIR222-201ENST00000384992 110 ntBASIC1.03□□□□□ -2.24
TNFP01375 RNU6-516P-201ENST00000411381 104 ntBASIC1.03□□□□□ -2.24
TNFP01375 OR51A5P-201ENST00000415429 942 ntBASIC1.03□□□□□ -2.24
TNFP01375 UBE2FP1-201ENST00000416536 447 ntBASIC1.03□□□□□ -2.24
TNFP01375 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.03□□□□□ -2.24
TNFP01375 AC092393.1-201ENST00000439625 742 ntBASIC1.03□□□□□ -2.24
TNFP01375 COX6CP18-201ENST00000448769 222 ntBASIC1.03□□□□□ -2.24
TNFP01375 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.03□□□□□ -2.24
TNFP01375 RNA5SP57-201ENST00000459463 123 ntBASIC1.03□□□□□ -2.24
TNFP01375 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
TNFP01375 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.03□□□□□ -2.24
TNFP01375 RRN3P3-201ENST00000549207 578 ntBASIC1.03□□□□□ -2.24
TNFP01375 AC012435.1-202ENST00000568772 240 ntBASIC1.03□□□□□ -2.24
TNFP01375 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC1.03□□□□□ -2.24
TNFP01375 MTND4LP5-201ENST00000605152 292 ntBASIC1.03□□□□□ -2.24
TNFP01375 SNORD114-21-201ENST00000606412 72 ntBASIC1.03□□□□□ -2.24
TNFP01375 AL589743.7-201ENST00000612637 233 ntBASIC1.03□□□□□ -2.24
TNFP01375 AP003476.1-201ENST00000623984 516 ntBASIC1.03□□□□□ -2.24
TNFP01375 AC087821.2-201ENST00000637086 450 ntBASIC1.03□□□□□ -2.24
TNFP01375 AC005832.2-201ENST00000538921 1430 ntBASIC1.03□□□□□ -2.24
TNFP01375 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.24
TNFP01375 Y_RNA.269-201ENST00000364685 89 ntBASIC1.02□□□□□ -2.25
TNFP01375 RNU1-93P-201ENST00000364704 169 ntBASIC1.02□□□□□ -2.25
TNFP01375 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
TNFP01375 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.02□□□□□ -2.25
TNFP01375 RNU6-1151P-201ENST00000384684 107 ntBASIC1.02□□□□□ -2.25
TNFP01375 RPL21P1-201ENST00000399532 476 ntBASIC1.02□□□□□ -2.25
TNFP01375 NDUFS5P1-201ENST00000405668 289 ntBASIC1.02□□□□□ -2.25
TNFP01375 LINC01347-201ENST00000417964 355 ntBASIC1.02□□□□□ -2.25
TNFP01375 AC007742.1-201ENST00000425789 329 ntBASIC1.02□□□□□ -2.25
TNFP01375 ELOCP26-201ENST00000436067 329 ntBASIC1.02□□□□□ -2.25
TNFP01375 NDUFA5P4-201ENST00000436704 385 ntBASIC1.02□□□□□ -2.25
TNFP01375 CALM1P1-201ENST00000442082 433 ntBASIC1.02□□□□□ -2.25
TNFP01375 HMGN3P1-201ENST00000453847 193 ntBASIC1.02□□□□□ -2.25
TNFP01375 SUMO2P2-201ENST00000456482 255 ntBASIC1.02□□□□□ -2.25
TNFP01375 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.02□□□□□ -2.25
TNFP01375 AC092757.1-201ENST00000467293 467 ntBASIC1.02□□□□□ -2.25
TNFP01375 RNU6-113P-201ENST00000516653 101 ntBASIC1.02□□□□□ -2.25
TNFP01375 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.02□□□□□ -2.25
TNFP01375 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.02□□□□□ -2.25
TNFP01375 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
TNFP01375 OR8K4P-201ENST00000534608 872 ntBASIC1.02□□□□□ -2.25
TNFP01375 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.02□□□□□ -2.25
TNFP01375 AC007785.2-201ENST00000598627 1916 ntBASIC1.02□□□□□ -2.25
TNFP01375 AC018638.7-201ENST00000605836 1114 ntBASIC1.02□□□□□ -2.25
TNFP01375 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.02□□□□□ -2.25
TNFP01375 AC080013.4-201ENST00000607624 649 ntBASIC1.02□□□□□ -2.25
TNFP01375 AC021851.1-201ENST00000608537 1082 ntBASIC1.02□□□□□ -2.25
TNFP01375 AC091925.2-201ENST00000625059 256 ntBASIC1.02□□□□□ -2.25
TNFP01375 MIR424-201ENST00000362227 98 ntBASIC1.01□□□□□ -2.25
TNFP01375 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
TNFP01375 SNORA40.19-201ENST00000390846 128 ntBASIC1.01□□□□□ -2.25
TNFP01375 RPS24P7-201ENST00000416921 246 ntBASIC1.01□□□□□ -2.25
TNFP01375 SFR1P2-201ENST00000421841 730 ntBASIC1.01□□□□□ -2.25
TNFP01375 NDUFB4P7-201ENST00000423198 363 ntBASIC1.01□□□□□ -2.25
TNFP01375 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.01□□□□□ -2.25
TNFP01375 AC241584.1-201ENST00000438469 1241 ntBASIC1.01□□□□□ -2.25
TNFP01375 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.01□□□□□ -2.25
TNFP01375 GDI2P2-201ENST00000445131 608 ntBASIC1.01□□□□□ -2.25
TNFP01375 MOB1AP2-201ENST00000446060 614 ntBASIC1.01□□□□□ -2.25
TNFP01375 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.01□□□□□ -2.25
TNFP01375 AC015724.1-201ENST00000478577 156 ntBASIC1.01□□□□□ -2.25
TNFP01375 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.01□□□□□ -2.25
TNFP01375 SNORA4.4-201ENST00000515921 135 ntBASIC1.01□□□□□ -2.25
TNFP01375 RNU5A-7P-201ENST00000515979 116 ntBASIC1.01□□□□□ -2.25
TNFP01375 IMMP1LP2-201ENST00000552954 492 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms