Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 AC008088.1-201ENST00000580993 280 ntBASIC2.84□□□□□ -1.95
SIX3O95343 AC130324.3-201ENST00000614165 542 ntBASIC2.84□□□□□ -1.95
SIX3O95343 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.84□□□□□ -1.95
SIX3O95343 AC097520.1-201ENST00000624435 385 ntBASIC2.84□□□□□ -1.95
SIX3O95343 MTND5P42-201ENST00000637720 498 ntBASIC2.84□□□□□ -1.95
SIX3O95343 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SIX3O95343 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
SIX3O95343 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
SIX3O95343 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
SIX3O95343 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.83□□□□□ -1.96
SIX3O95343 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
SIX3O95343 AL161431.1-201ENST00000618966 4205 ntBASIC2.83□□□□□ -1.96
SIX3O95343 RPL9P7-201ENST00000330965 580 ntBASIC2.83□□□□□ -1.96
SIX3O95343 RNU5E-1-201ENST00000362477 120 ntBASIC2.83□□□□□ -1.96
SIX3O95343 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
SIX3O95343 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
SIX3O95343 SNORA20.2-201ENST00000383922 131 ntBASIC2.83□□□□□ -1.96
SIX3O95343 SNORA40.3-201ENST00000390964 122 ntBASIC2.83□□□□□ -1.96
SIX3O95343 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.83□□□□□ -1.96
SIX3O95343 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.83□□□□□ -1.96
SIX3O95343 SKA2P1-201ENST00000425592 390 ntBASIC2.83□□□□□ -1.96
SIX3O95343 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.83□□□□□ -1.96
SIX3O95343 AC093151.1-201ENST00000427711 313 ntBASIC2.83□□□□□ -1.96
SIX3O95343 MTATP6P17-201ENST00000431030 672 ntBASIC2.83□□□□□ -1.96
SIX3O95343 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.83□□□□□ -1.96
SIX3O95343 AL445567.1-201ENST00000439121 144 ntBASIC2.83□□□□□ -1.96
SIX3O95343 AC010095.1-201ENST00000443543 144 ntBASIC2.83□□□□□ -1.96
SIX3O95343 AC233279.1-201ENST00000455300 423 ntBASIC2.83□□□□□ -1.96
SIX3O95343 MTCO2P6-201ENST00000463134 685 ntBASIC2.83□□□□□ -1.96
SIX3O95343 AC139453.3-201ENST00000493276 369 ntBASIC2.83□□□□□ -1.96
SIX3O95343 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.83□□□□□ -1.96
SIX3O95343 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.83□□□□□ -1.96
SIX3O95343 RNA5SP341-201ENST00000516261 117 ntBASIC2.83□□□□□ -1.96
SIX3O95343 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.83□□□□□ -1.96
SIX3O95343 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.83□□□□□ -1.96
SIX3O95343 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.83□□□□□ -1.96
SIX3O95343 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.83□□□□□ -1.96
SIX3O95343 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.83□□□□□ -1.96
SIX3O95343 AL358072.1-201ENST00000604156 575 ntBASIC2.83□□□□□ -1.96
SIX3O95343 AC022893.3-201ENST00000607665 437 ntBASIC2.83□□□□□ -1.96
SIX3O95343 AL161734.1-201ENST00000609720 557 ntBASIC2.83□□□□□ -1.96
SIX3O95343 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.83□□□□□ -1.96
SIX3O95343 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.83□□□□□ -1.96
SIX3O95343 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SIX3O95343 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
SIX3O95343 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
SIX3O95343 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SIX3O95343 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.82□□□□□ -1.96
SIX3O95343 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.82□□□□□ -1.96
SIX3O95343 RNU6-778P-201ENST00000363269 103 ntBASIC2.82□□□□□ -1.96
SIX3O95343 RNU6-960P-201ENST00000364056 120 ntBASIC2.82□□□□□ -1.96
SIX3O95343 RNU6-14P-201ENST00000384630 106 ntBASIC2.82□□□□□ -1.96
SIX3O95343 RNU6-750P-201ENST00000390946 107 ntBASIC2.82□□□□□ -1.96
SIX3O95343 FO393413.1-201ENST00000402892 195 ntBASIC2.82□□□□□ -1.96
SIX3O95343 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.82□□□□□ -1.96
SIX3O95343 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.82□□□□□ -1.96
SIX3O95343 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.82□□□□□ -1.96
SIX3O95343 AC096649.2-201ENST00000416186 393 ntBASIC2.82□□□□□ -1.96
SIX3O95343 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.82□□□□□ -1.96
SIX3O95343 CYCSP46-201ENST00000423569 204 ntBASIC2.82□□□□□ -1.96
SIX3O95343 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.82□□□□□ -1.96
SIX3O95343 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.82□□□□□ -1.96
SIX3O95343 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.82□□□□□ -1.96
SIX3O95343 RPL23AP30-201ENST00000432419 501 ntBASIC2.82□□□□□ -1.96
SIX3O95343 RPS24P1-201ENST00000438550 371 ntBASIC2.82□□□□□ -1.96
SIX3O95343 HMGB3P12-201ENST00000438745 556 ntBASIC2.82□□□□□ -1.96
SIX3O95343 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.82□□□□□ -1.96
SIX3O95343 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SIX3O95343 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.82□□□□□ -1.96
SIX3O95343 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.82□□□□□ -1.96
SIX3O95343 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.82□□□□□ -1.96
SIX3O95343 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.82□□□□□ -1.96
SIX3O95343 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.82□□□□□ -1.96
SIX3O95343 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.82□□□□□ -1.96
SIX3O95343 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.82□□□□□ -1.96
SIX3O95343 Y_RNA.689-201ENST00000516589 107 ntBASIC2.82□□□□□ -1.96
SIX3O95343 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.82□□□□□ -1.96
SIX3O95343 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.82□□□□□ -1.96
SIX3O95343 PSMA2P1-201ENST00000526365 646 ntBASIC2.82□□□□□ -1.96
SIX3O95343 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.82□□□□□ -1.96
SIX3O95343 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SIX3O95343 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SIX3O95343 AC135628.1-201ENST00000568867 534 ntBASIC2.82□□□□□ -1.96
SIX3O95343 AC007151.1-201ENST00000572774 483 ntBASIC2.82□□□□□ -1.96
SIX3O95343 MIR4782-201ENST00000577987 79 ntBASIC2.82□□□□□ -1.96
SIX3O95343 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.82□□□□□ -1.96
SIX3O95343 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.82□□□□□ -1.96
SIX3O95343 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.82□□□□□ -1.96
SIX3O95343 MIR7515-201ENST00000637837 67 ntBASIC2.82□□□□□ -1.96
SIX3O95343 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SIX3O95343 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SIX3O95343 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.81□□□□□ -1.96
SIX3O95343 AC010889.1-201ENST00000566193 2666 ntBASIC2.81□□□□□ -1.96
SIX3O95343 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SIX3O95343 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SIX3O95343 NACAP2-201ENST00000318548 624 ntBASIC2.81□□□□□ -1.96
SIX3O95343 SNORA9.2-201ENST00000365361 133 ntBASIC2.81□□□□□ -1.96
SIX3O95343 RPL23AP32-201ENST00000395315 459 ntBASIC2.81□□□□□ -1.96
SIX3O95343 RNA5SP344-201ENST00000411081 104 ntBASIC2.81□□□□□ -1.96
SIX3O95343 HMGN1P14-201ENST00000412459 517 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms