Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.27□□□□□ -1.73
CLSTN1O94985 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.27□□□□□ -1.73
CLSTN1O94985 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLSTN1O94985 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLSTN1O94985 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.27□□□□□ -1.73
CLSTN1O94985 RNA5SP399-201ENST00000364003 117 ntBASIC4.27□□□□□ -1.73
CLSTN1O94985 RNU6-1303P-201ENST00000364841 107 ntBASIC4.27□□□□□ -1.73
CLSTN1O94985 Y_RNA.378-201ENST00000365652 113 ntBASIC4.27□□□□□ -1.73
CLSTN1O94985 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.27□□□□□ -1.73
CLSTN1O94985 RNU6-198P-201ENST00000384258 104 ntBASIC4.27□□□□□ -1.73
CLSTN1O94985 RNU6-658P-201ENST00000384606 106 ntBASIC4.27□□□□□ -1.73
CLSTN1O94985 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.27□□□□□ -1.73
CLSTN1O94985 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.27□□□□□ -1.73
CLSTN1O94985 RPL30P16-201ENST00000419341 429 ntBASIC4.27□□□□□ -1.73
CLSTN1O94985 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.27□□□□□ -1.73
CLSTN1O94985 AC007389.2-201ENST00000434630 306 ntBASIC4.27□□□□□ -1.73
CLSTN1O94985 RPS29P7-201ENST00000439662 171 ntBASIC4.27□□□□□ -1.73
CLSTN1O94985 CYCSP32-201ENST00000440548 321 ntBASIC4.27□□□□□ -1.73
CLSTN1O94985 RPL21P11-201ENST00000461458 483 ntBASIC4.27□□□□□ -1.73
CLSTN1O94985 AC004801.2-202ENST00000463559 283 ntBASIC4.27□□□□□ -1.73
CLSTN1O94985 RPL38P4-201ENST00000502376 214 ntBASIC4.27□□□□□ -1.73
CLSTN1O94985 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.27□□□□□ -1.73
CLSTN1O94985 SNORA31.19-201ENST00000517079 126 ntBASIC4.27□□□□□ -1.73
CLSTN1O94985 SNORA31.26-201ENST00000517250 137 ntBASIC4.27□□□□□ -1.73
CLSTN1O94985 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.27□□□□□ -1.73
CLSTN1O94985 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.27□□□□□ -1.73
CLSTN1O94985 TRAV37-201ENST00000553906 342 ntBASIC4.27□□□□□ -1.73
CLSTN1O94985 AL391261.3-201ENST00000557194 520 ntBASIC4.27□□□□□ -1.73
CLSTN1O94985 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.27□□□□□ -1.73
CLSTN1O94985 HMGN2P15-201ENST00000585707 270 ntBASIC4.27□□□□□ -1.73
CLSTN1O94985 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.27□□□□□ -1.73
CLSTN1O94985 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.27□□□□□ -1.73
CLSTN1O94985 AC058791.1-201ENST00000608412 3198 ntBASIC4.27□□□□□ -1.73
CLSTN1O94985 AC004520.1-201ENST00000608362 1413 ntBASIC4.27□□□□□ -1.73
CLSTN1O94985 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CLSTN1O94985 AC006504.1-201ENST00000562493 3666 ntBASIC4.26□□□□□ -1.73
CLSTN1O94985 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.26□□□□□ -1.73
CLSTN1O94985 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLSTN1O94985 Y_RNA.231-201ENST00000364358 102 ntBASIC4.26□□□□□ -1.73
CLSTN1O94985 RNA5SP479-201ENST00000364858 117 ntBASIC4.26□□□□□ -1.73
CLSTN1O94985 MIR888-201ENST00000401186 77 ntBASIC4.26□□□□□ -1.73
CLSTN1O94985 MIR1193-201ENST00000408109 78 ntBASIC4.26□□□□□ -1.73
CLSTN1O94985 MIR1289-1-201ENST00000408836 144 ntBASIC4.26□□□□□ -1.73
CLSTN1O94985 Y_RNA.615-201ENST00000410769 117 ntBASIC4.26□□□□□ -1.73
CLSTN1O94985 AC017079.2-201ENST00000416102 485 ntBASIC4.26□□□□□ -1.73
CLSTN1O94985 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.26□□□□□ -1.73
CLSTN1O94985 HMGN2P30-201ENST00000423237 256 ntBASIC4.26□□□□□ -1.73
CLSTN1O94985 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.26□□□□□ -1.73
CLSTN1O94985 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.26□□□□□ -1.73
CLSTN1O94985 MYL8P-204ENST00000431574 518 ntBASIC4.26□□□□□ -1.73
CLSTN1O94985 CALM1P1-201ENST00000442082 433 ntBASIC4.26□□□□□ -1.73
CLSTN1O94985 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.26□□□□□ -1.73
CLSTN1O94985 NUTF2P7-201ENST00000453086 375 ntBASIC4.26□□□□□ -1.73
CLSTN1O94985 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.26□□□□□ -1.73
CLSTN1O94985 AL583843.1-201ENST00000456070 346 ntBASIC4.26□□□□□ -1.73
CLSTN1O94985 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.26□□□□□ -1.73
CLSTN1O94985 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.26□□□□□ -1.73
CLSTN1O94985 MTCYBP18-201ENST00000501056 747 ntBASIC4.26□□□□□ -1.73
CLSTN1O94985 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.26□□□□□ -1.73
CLSTN1O94985 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.26□□□□□ -1.73
CLSTN1O94985 TBCAP3-201ENST00000512475 312 ntBASIC4.26□□□□□ -1.73
CLSTN1O94985 AC026726.1-201ENST00000512859 601 ntBASIC4.26□□□□□ -1.73
CLSTN1O94985 AC026402.1-201ENST00000513642 170 ntBASIC4.26□□□□□ -1.73
CLSTN1O94985 LRRC34P2-201ENST00000514850 553 ntBASIC4.26□□□□□ -1.73
CLSTN1O94985 RNU2-69P-201ENST00000516061 100 ntBASIC4.26□□□□□ -1.73
CLSTN1O94985 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.26□□□□□ -1.73
CLSTN1O94985 AC022695.1-201ENST00000522089 237 ntBASIC4.26□□□□□ -1.73
CLSTN1O94985 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.26□□□□□ -1.73
CLSTN1O94985 AC078814.3-201ENST00000553036 491 ntBASIC4.26□□□□□ -1.73
CLSTN1O94985 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.26□□□□□ -1.73
CLSTN1O94985 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.26□□□□□ -1.73
CLSTN1O94985 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.26□□□□□ -1.73
CLSTN1O94985 AC136624.4-201ENST00000573044 370 ntBASIC4.26□□□□□ -1.73
CLSTN1O94985 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.26□□□□□ -1.73
CLSTN1O94985 MIR6798-201ENST00000612887 67 ntBASIC4.26□□□□□ -1.73
CLSTN1O94985 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.26□□□□□ -1.73
CLSTN1O94985 U6.42-201ENST00000618440 107 ntBASIC4.26□□□□□ -1.73
CLSTN1O94985 AC090617.7-201ENST00000623952 126 ntBASIC4.26□□□□□ -1.73
CLSTN1O94985 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLSTN1O94985 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.26□□□□□ -1.73
CLSTN1O94985 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.26□□□□□ -1.73
CLSTN1O94985 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLSTN1O94985 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.25□□□□□ -1.73
CLSTN1O94985 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLSTN1O94985 RNU1-73P-201ENST00000383971 164 ntBASIC4.25□□□□□ -1.73
CLSTN1O94985 RNU6-434P-201ENST00000384376 107 ntBASIC4.25□□□□□ -1.73
CLSTN1O94985 MIR514A2-201ENST00000385131 88 ntBASIC4.25□□□□□ -1.73
CLSTN1O94985 MIR514A3-201ENST00000385132 88 ntBASIC4.25□□□□□ -1.73
CLSTN1O94985 AL356057.2-201ENST00000403318 432 ntBASIC4.25□□□□□ -1.73
CLSTN1O94985 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
CLSTN1O94985 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.25□□□□□ -1.73
CLSTN1O94985 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.25□□□□□ -1.73
CLSTN1O94985 AL353729.1-201ENST00000425044 720 ntBASIC4.25□□□□□ -1.73
CLSTN1O94985 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.25□□□□□ -1.73
CLSTN1O94985 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.25□□□□□ -1.73
CLSTN1O94985 HMGB1P31-201ENST00000437242 427 ntBASIC4.25□□□□□ -1.73
CLSTN1O94985 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.25□□□□□ -1.73
CLSTN1O94985 AL714022.1-201ENST00000439897 151 ntBASIC4.25□□□□□ -1.73
CLSTN1O94985 PRPS1P1-201ENST00000445305 876 ntBASIC4.25□□□□□ -1.73
CLSTN1O94985 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms