Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 RNU6-123P-201ENST00000516163 102 ntBASIC3.09□□□□□ -1.91
GPC4O75487 RNU6-914P-201ENST00000516749 109 ntBASIC3.09□□□□□ -1.91
GPC4O75487 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.09□□□□□ -1.91
GPC4O75487 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.09□□□□□ -1.91
GPC4O75487 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.09□□□□□ -1.91
GPC4O75487 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.09□□□□□ -1.91
GPC4O75487 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.09□□□□□ -1.91
GPC4O75487 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.09□□□□□ -1.91
GPC4O75487 MTCO3P24-201ENST00000572729 782 ntBASIC3.09□□□□□ -1.91
GPC4O75487 MIR5004-201ENST00000579078 107 ntBASIC3.09□□□□□ -1.91
GPC4O75487 AC008521.1-201ENST00000587471 187 ntBASIC3.09□□□□□ -1.91
GPC4O75487 AC174048.1-201ENST00000603389 144 ntBASIC3.09□□□□□ -1.91
GPC4O75487 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.09□□□□□ -1.91
GPC4O75487 AC012468.1-201ENST00000604888 430 ntBASIC3.09□□□□□ -1.91
GPC4O75487 AL158032.1-201ENST00000605401 106 ntBASIC3.09□□□□□ -1.91
GPC4O75487 AC007684.1-201ENST00000609671 477 ntBASIC3.09□□□□□ -1.91
GPC4O75487 AC096577.2-201ENST00000611455 153 ntBASIC3.09□□□□□ -1.91
GPC4O75487 AC025034.2-201ENST00000623264 286 ntBASIC3.09□□□□□ -1.91
GPC4O75487 AC084035.1-201ENST00000634543 607 ntBASIC3.09□□□□□ -1.91
GPC4O75487 Z99571.1-201ENST00000636677 394 ntBASIC3.09□□□□□ -1.91
GPC4O75487 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.09□□□□□ -1.91
GPC4O75487 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.09□□□□□ -1.91
GPC4O75487 MTND5P29-201ENST00000458676 1807 ntBASIC3.09□□□□□ -1.92
GPC4O75487 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
GPC4O75487 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.08□□□□□ -1.92
GPC4O75487 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.08□□□□□ -1.92
GPC4O75487 AL353743.1-202ENST00000431724 1695 ntBASIC3.08□□□□□ -1.92
GPC4O75487 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.08□□□□□ -1.92
GPC4O75487 RNU6-884P-201ENST00000363889 107 ntBASIC3.08□□□□□ -1.92
GPC4O75487 RNU6-190P-201ENST00000384154 102 ntBASIC3.08□□□□□ -1.92
GPC4O75487 RNU6-198P-201ENST00000384258 104 ntBASIC3.08□□□□□ -1.92
GPC4O75487 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.08□□□□□ -1.92
GPC4O75487 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
GPC4O75487 AC073464.1-201ENST00000429823 534 ntBASIC3.08□□□□□ -1.92
GPC4O75487 RPL36AP6-201ENST00000435770 321 ntBASIC3.08□□□□□ -1.92
GPC4O75487 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.08□□□□□ -1.92
GPC4O75487 AL714022.1-201ENST00000439897 151 ntBASIC3.08□□□□□ -1.92
GPC4O75487 RPS12P18-201ENST00000442381 270 ntBASIC3.08□□□□□ -1.92
GPC4O75487 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.08□□□□□ -1.92
GPC4O75487 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.08□□□□□ -1.92
GPC4O75487 RPL9P6-201ENST00000492764 598 ntBASIC3.08□□□□□ -1.92
GPC4O75487 HMGB1P29-201ENST00000505659 499 ntBASIC3.08□□□□□ -1.92
GPC4O75487 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.08□□□□□ -1.92
GPC4O75487 SNORD27.1-201ENST00000516319 72 ntBASIC3.08□□□□□ -1.92
GPC4O75487 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.08□□□□□ -1.92
GPC4O75487 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.08□□□□□ -1.92
GPC4O75487 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.08□□□□□ -1.92
GPC4O75487 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.08□□□□□ -1.92
GPC4O75487 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.08□□□□□ -1.92
GPC4O75487 BNIP3P9-201ENST00000603714 553 ntBASIC3.08□□□□□ -1.92
GPC4O75487 MTND4LP5-201ENST00000605152 292 ntBASIC3.08□□□□□ -1.92
GPC4O75487 MIR15A-201ENST00000607334 83 ntBASIC3.08□□□□□ -1.92
GPC4O75487 AC107294.1-201ENST00000609524 467 ntBASIC3.08□□□□□ -1.92
GPC4O75487 AC012409.4-201ENST00000612923 249 ntBASIC3.08□□□□□ -1.92
GPC4O75487 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.08□□□□□ -1.92
GPC4O75487 AL158209.2-201ENST00000619266 216 ntBASIC3.08□□□□□ -1.92
GPC4O75487 AC073308.1-201ENST00000623696 305 ntBASIC3.08□□□□□ -1.92
GPC4O75487 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.08□□□□□ -1.92
GPC4O75487 MIR622-201ENST00000638396 96 ntBASIC3.08□□□□□ -1.92
GPC4O75487 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
GPC4O75487 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
GPC4O75487 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.07□□□□□ -1.92
GPC4O75487 RNA5SP387-201ENST00000364226 106 ntBASIC3.07□□□□□ -1.92
GPC4O75487 SNORA62.1-201ENST00000364287 154 ntBASIC3.07□□□□□ -1.92
GPC4O75487 Y_RNA.381-201ENST00000365666 102 ntBASIC3.07□□□□□ -1.92
GPC4O75487 Y_RNA.576-201ENST00000384781 102 ntBASIC3.07□□□□□ -1.92
GPC4O75487 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
GPC4O75487 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.07□□□□□ -1.92
GPC4O75487 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.07□□□□□ -1.92
GPC4O75487 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.07□□□□□ -1.92
GPC4O75487 BMS1P22-201ENST00000414726 313 ntBASIC3.07□□□□□ -1.92
GPC4O75487 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.07□□□□□ -1.92
GPC4O75487 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.07□□□□□ -1.92
GPC4O75487 MTATP6P18-201ENST00000417994 673 ntBASIC3.07□□□□□ -1.92
GPC4O75487 HSPE1P1-201ENST00000421494 318 ntBASIC3.07□□□□□ -1.92
GPC4O75487 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.07□□□□□ -1.92
GPC4O75487 AL139281.1-201ENST00000422120 335 ntBASIC3.07□□□□□ -1.92
GPC4O75487 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.07□□□□□ -1.92
GPC4O75487 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.07□□□□□ -1.92
GPC4O75487 RPL36AP53-201ENST00000432891 316 ntBASIC3.07□□□□□ -1.92
GPC4O75487 AC002486.1-201ENST00000435098 391 ntBASIC3.07□□□□□ -1.92
GPC4O75487 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.07□□□□□ -1.92
GPC4O75487 AL590639.1-201ENST00000456484 337 ntBASIC3.07□□□□□ -1.92
GPC4O75487 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.07□□□□□ -1.92
GPC4O75487 AC107401.1-201ENST00000503426 685 ntBASIC3.07□□□□□ -1.92
GPC4O75487 RN7SKP43-201ENST00000516173 320 ntBASIC3.07□□□□□ -1.92
GPC4O75487 SNORD59.2-201ENST00000516873 68 ntBASIC3.07□□□□□ -1.92
GPC4O75487 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.07□□□□□ -1.92
GPC4O75487 OR5AL2P-201ENST00000532185 920 ntBASIC3.07□□□□□ -1.92
GPC4O75487 AL359212.1-201ENST00000556608 614 ntBASIC3.07□□□□□ -1.92
GPC4O75487 AL391261.3-201ENST00000557194 520 ntBASIC3.07□□□□□ -1.92
GPC4O75487 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.07□□□□□ -1.92
GPC4O75487 MIR4775-201ENST00000581168 75 ntBASIC3.07□□□□□ -1.92
GPC4O75487 AC087241.4-201ENST00000612441 480 ntBASIC3.07□□□□□ -1.92
GPC4O75487 AC011155.2-201ENST00000623202 216 ntBASIC3.07□□□□□ -1.92
GPC4O75487 AL157786.1-207ENST00000627771 695 ntBASIC3.07□□□□□ -1.92
GPC4O75487 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
GPC4O75487 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
GPC4O75487 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
GPC4O75487 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms