Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 RNU6-343P-201ENST00000364709 104 ntBASIC2.16□□□□□ -2.06
NPHP4O75161 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
NPHP4O75161 RNU6-342P-201ENST00000384521 104 ntBASIC2.16□□□□□ -2.06
NPHP4O75161 MTCO1P56-201ENST00000401674 224 ntBASIC2.16□□□□□ -2.06
NPHP4O75161 AC007435.1-201ENST00000421086 415 ntBASIC2.16□□□□□ -2.06
NPHP4O75161 RPL7L1P10-201ENST00000427790 463 ntBASIC2.16□□□□□ -2.06
NPHP4O75161 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.16□□□□□ -2.06
NPHP4O75161 AL714022.1-201ENST00000439897 151 ntBASIC2.16□□□□□ -2.06
NPHP4O75161 TPT1P14-201ENST00000448018 505 ntBASIC2.16□□□□□ -2.06
NPHP4O75161 RNU6-420P-201ENST00000458780 107 ntBASIC2.16□□□□□ -2.06
NPHP4O75161 AC116337.2-201ENST00000477662 156 ntBASIC2.16□□□□□ -2.06
NPHP4O75161 CDC42P4-201ENST00000510507 563 ntBASIC2.16□□□□□ -2.06
NPHP4O75161 RNY4P37-201ENST00000516225 96 ntBASIC2.16□□□□□ -2.06
NPHP4O75161 RNU6-1225P-201ENST00000516336 65 ntBASIC2.16□□□□□ -2.06
NPHP4O75161 RNU6-1028P-201ENST00000517164 93 ntBASIC2.16□□□□□ -2.06
NPHP4O75161 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.16□□□□□ -2.06
NPHP4O75161 SLC2A13P1-201ENST00000531560 322 ntBASIC2.16□□□□□ -2.06
NPHP4O75161 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.16□□□□□ -2.06
NPHP4O75161 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.16□□□□□ -2.06
NPHP4O75161 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.16□□□□□ -2.06
NPHP4O75161 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.16□□□□□ -2.06
NPHP4O75161 AC068620.3-201ENST00000602749 560 ntBASIC2.16□□□□□ -2.06
NPHP4O75161 AC069304.2-201ENST00000605154 435 ntBASIC2.16□□□□□ -2.06
NPHP4O75161 AP002802.2-201ENST00000605877 235 ntBASIC2.16□□□□□ -2.06
NPHP4O75161 AL158211.4-201ENST00000606988 584 ntBASIC2.16□□□□□ -2.06
NPHP4O75161 AC080013.4-201ENST00000607624 649 ntBASIC2.16□□□□□ -2.06
NPHP4O75161 MIR6078-201ENST00000611069 100 ntBASIC2.16□□□□□ -2.06
NPHP4O75161 AC073308.1-201ENST00000623696 305 ntBASIC2.16□□□□□ -2.06
NPHP4O75161 AC068880.5-201ENST00000624331 290 ntBASIC2.16□□□□□ -2.06
NPHP4O75161 AC126544.2-201ENST00000625174 749 ntBASIC2.16□□□□□ -2.06
NPHP4O75161 AL022578.1-201ENST00000439330 1433 ntBASIC2.15□□□□□ -2.06
NPHP4O75161 CDR1-202ENST00000625883 1485 ntBASIC2.15□□□□□ -2.07
NPHP4O75161 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
NPHP4O75161 RNU6-1035P-201ENST00000384477 107 ntBASIC2.15□□□□□ -2.07
NPHP4O75161 RNA5SP354-201ENST00000391247 136 ntBASIC2.15□□□□□ -2.07
NPHP4O75161 MTND4P3-201ENST00000417829 541 ntBASIC2.15□□□□□ -2.07
NPHP4O75161 PPP1R11P2-201ENST00000423543 382 ntBASIC2.15□□□□□ -2.07
NPHP4O75161 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.15□□□□□ -2.07
NPHP4O75161 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
NPHP4O75161 MTND2P24-201ENST00000453434 806 ntBASIC2.15□□□□□ -2.07
NPHP4O75161 AC092991.1-201ENST00000477176 376 ntBASIC2.15□□□□□ -2.07
NPHP4O75161 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.15□□□□□ -2.07
NPHP4O75161 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.15□□□□□ -2.07
NPHP4O75161 MTCYBP16-201ENST00000509187 1129 ntBASIC2.15□□□□□ -2.07
NPHP4O75161 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.15□□□□□ -2.07
NPHP4O75161 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.15□□□□□ -2.07
NPHP4O75161 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.15□□□□□ -2.07
NPHP4O75161 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.15□□□□□ -2.07
NPHP4O75161 AC126365.2-201ENST00000580630 379 ntBASIC2.15□□□□□ -2.07
NPHP4O75161 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.15□□□□□ -2.07
NPHP4O75161 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
NPHP4O75161 AC005832.2-201ENST00000538921 1430 ntBASIC2.15□□□□□ -2.07
NPHP4O75161 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.14□□□□□ -2.07
NPHP4O75161 AC080100.1-201ENST00000624239 5356 ntBASIC2.14□□□□□ -2.07
NPHP4O75161 RNU5E-8P-201ENST00000363502 116 ntBASIC2.14□□□□□ -2.07
NPHP4O75161 SNORA67.1-201ENST00000364749 141 ntBASIC2.14□□□□□ -2.07
NPHP4O75161 RNU6-224P-201ENST00000384055 107 ntBASIC2.14□□□□□ -2.07
NPHP4O75161 MIR1290-201ENST00000408735 78 ntBASIC2.14□□□□□ -2.07
NPHP4O75161 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.14□□□□□ -2.07
NPHP4O75161 CCDC58P2-201ENST00000417131 366 ntBASIC2.14□□□□□ -2.07
NPHP4O75161 MRPS36P1-201ENST00000421291 307 ntBASIC2.14□□□□□ -2.07
NPHP4O75161 NDUFB4P7-201ENST00000423198 363 ntBASIC2.14□□□□□ -2.07
NPHP4O75161 RPS6P15-201ENST00000431996 751 ntBASIC2.14□□□□□ -2.07
NPHP4O75161 USP9YP22-201ENST00000438971 294 ntBASIC2.14□□□□□ -2.07
NPHP4O75161 MTCYBP3-201ENST00000445588 1137 ntBASIC2.14□□□□□ -2.07
NPHP4O75161 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.14□□□□□ -2.07
NPHP4O75161 RPL21P134-201ENST00000453468 483 ntBASIC2.14□□□□□ -2.07
NPHP4O75161 MTND4LP3-201ENST00000468320 276 ntBASIC2.14□□□□□ -2.07
NPHP4O75161 LTV1P1-201ENST00000510683 1237 ntBASIC2.14□□□□□ -2.07
NPHP4O75161 MRPS36P2-201ENST00000512569 299 ntBASIC2.14□□□□□ -2.07
NPHP4O75161 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.14□□□□□ -2.07
NPHP4O75161 RNU6-583P-201ENST00000516012 92 ntBASIC2.14□□□□□ -2.07
NPHP4O75161 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.14□□□□□ -2.07
NPHP4O75161 OR4R1P-201ENST00000529879 463 ntBASIC2.14□□□□□ -2.07
NPHP4O75161 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.14□□□□□ -2.07
NPHP4O75161 HIGD1AP17-201ENST00000554576 276 ntBASIC2.14□□□□□ -2.07
NPHP4O75161 AC005951.2-201ENST00000576282 495 ntBASIC2.14□□□□□ -2.07
NPHP4O75161 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.14□□□□□ -2.07
NPHP4O75161 AL603758.1-201ENST00000618654 241 ntBASIC2.14□□□□□ -2.07
NPHP4O75161 MIR203B-201ENST00000636080 86 ntBASIC2.14□□□□□ -2.07
NPHP4O75161 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
NPHP4O75161 RNU1-39P-201ENST00000383897 165 ntBASIC2.13□□□□□ -2.07
NPHP4O75161 RNU6-952P-201ENST00000391164 108 ntBASIC2.13□□□□□ -2.07
NPHP4O75161 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.13□□□□□ -2.07
NPHP4O75161 AL030996.1-201ENST00000411430 235 ntBASIC2.13□□□□□ -2.07
NPHP4O75161 Z85995.1-201ENST00000415547 335 ntBASIC2.13□□□□□ -2.07
NPHP4O75161 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.13□□□□□ -2.07
NPHP4O75161 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.13□□□□□ -2.07
NPHP4O75161 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
NPHP4O75161 RPL31P41-201ENST00000477967 372 ntBASIC2.13□□□□□ -2.07
NPHP4O75161 AC008427.1-201ENST00000503102 655 ntBASIC2.13□□□□□ -2.07
NPHP4O75161 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.13□□□□□ -2.07
NPHP4O75161 AC034244.1-201ENST00000507687 207 ntBASIC2.13□□□□□ -2.07
NPHP4O75161 OR5BM1P-201ENST00000512021 366 ntBASIC2.13□□□□□ -2.07
NPHP4O75161 AF131216.2-201ENST00000512316 564 ntBASIC2.13□□□□□ -2.07
NPHP4O75161 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.13□□□□□ -2.07
NPHP4O75161 SUB1P1-201ENST00000524415 382 ntBASIC2.13□□□□□ -2.07
NPHP4O75161 OR5AQ1P-201ENST00000527596 927 ntBASIC2.13□□□□□ -2.07
NPHP4O75161 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.13□□□□□ -2.07
NPHP4O75161 AL132857.1-201ENST00000555180 708 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms