Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RNU2-68P-201ENST00000410878 191 ntBASIC2.94□□□□□ -1.94
SSX4O60224 AC096664.2-201ENST00000411843 406 ntBASIC2.94□□□□□ -1.94
SSX4O60224 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.94□□□□□ -1.94
SSX4O60224 AC233702.1-201ENST00000482905 502 ntBASIC2.94□□□□□ -1.94
SSX4O60224 SUMO2P6-201ENST00000505273 288 ntBASIC2.94□□□□□ -1.94
SSX4O60224 ARL4AP2-201ENST00000507378 601 ntBASIC2.94□□□□□ -1.94
SSX4O60224 RNU6-720P-201ENST00000516363 108 ntBASIC2.94□□□□□ -1.94
SSX4O60224 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SSX4O60224 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SSX4O60224 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.94□□□□□ -1.94
SSX4O60224 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.94□□□□□ -1.94
SSX4O60224 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.94□□□□□ -1.94
SSX4O60224 AL157786.1-207ENST00000627771 695 ntBASIC2.94□□□□□ -1.94
SSX4O60224 AL512643.1-201ENST00000635735 524 ntBASIC2.94□□□□□ -1.94
SSX4O60224 MIR6863-201ENST00000636112 90 ntBASIC2.94□□□□□ -1.94
SSX4O60224 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
SSX4O60224 MTND5P7-201ENST00000413558 1798 ntBASIC2.94□□□□□ -1.94
SSX4O60224 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SSX4O60224 AC103988.1-201ENST00000566382 2177 ntBASIC2.94□□□□□ -1.94
SSX4O60224 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
SSX4O60224 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.93□□□□□ -1.94
SSX4O60224 AC010680.1-201ENST00000590024 3590 ntBASIC2.93□□□□□ -1.94
SSX4O60224 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.93□□□□□ -1.94
SSX4O60224 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
SSX4O60224 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.93□□□□□ -1.94
SSX4O60224 ZNF680P1-201ENST00000436625 1469 ntBASIC2.93□□□□□ -1.94
SSX4O60224 RNU6-884P-201ENST00000363889 107 ntBASIC2.93□□□□□ -1.94
SSX4O60224 SNORD115-7-201ENST00000365306 82 ntBASIC2.93□□□□□ -1.94
SSX4O60224 RNU4-48P-201ENST00000365559 182 ntBASIC2.93□□□□□ -1.94
SSX4O60224 SNORA4.3-201ENST00000365564 137 ntBASIC2.93□□□□□ -1.94
SSX4O60224 Y_RNA.576-201ENST00000384781 102 ntBASIC2.93□□□□□ -1.94
SSX4O60224 RN7SKP123-201ENST00000410732 291 ntBASIC2.93□□□□□ -1.94
SSX4O60224 Z99755.1-201ENST00000414048 380 ntBASIC2.93□□□□□ -1.94
SSX4O60224 AC080125.1-201ENST00000414888 684 ntBASIC2.93□□□□□ -1.94
SSX4O60224 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.93□□□□□ -1.94
SSX4O60224 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.93□□□□□ -1.94
SSX4O60224 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.93□□□□□ -1.94
SSX4O60224 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.93□□□□□ -1.94
SSX4O60224 AC006028.1-201ENST00000438379 402 ntBASIC2.93□□□□□ -1.94
SSX4O60224 MTND1P1-201ENST00000445453 368 ntBASIC2.93□□□□□ -1.94
SSX4O60224 AC115115.1-201ENST00000449927 248 ntBASIC2.93□□□□□ -1.94
SSX4O60224 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.93□□□□□ -1.94
SSX4O60224 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.93□□□□□ -1.94
SSX4O60224 RPS26P21-201ENST00000475397 348 ntBASIC2.93□□□□□ -1.94
SSX4O60224 AC109927.2-201ENST00000506416 303 ntBASIC2.93□□□□□ -1.94
SSX4O60224 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.93□□□□□ -1.94
SSX4O60224 IGKV2-26-201ENST00000518305 343 ntBASIC2.93□□□□□ -1.94
SSX4O60224 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.93□□□□□ -1.94
SSX4O60224 AL359212.1-201ENST00000556608 614 ntBASIC2.93□□□□□ -1.94
SSX4O60224 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.93□□□□□ -1.94
SSX4O60224 AC106782.4-201ENST00000568264 210 ntBASIC2.93□□□□□ -1.94
SSX4O60224 MIR4775-201ENST00000581168 75 ntBASIC2.93□□□□□ -1.94
SSX4O60224 MIR4506-201ENST00000584693 77 ntBASIC2.93□□□□□ -1.94
SSX4O60224 AC008521.1-201ENST00000587471 187 ntBASIC2.93□□□□□ -1.94
SSX4O60224 AC008536.2-201ENST00000607284 349 ntBASIC2.93□□□□□ -1.94
SSX4O60224 MIR8057-201ENST00000620957 69 ntBASIC2.93□□□□□ -1.94
SSX4O60224 AC099506.2-201ENST00000623074 221 ntBASIC2.93□□□□□ -1.94
SSX4O60224 AC124864.2-201ENST00000624736 186 ntBASIC2.93□□□□□ -1.94
SSX4O60224 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.93□□□□□ -1.94
SSX4O60224 AC099654.12-201ENST00000639868 649 ntBASIC2.93□□□□□ -1.94
SSX4O60224 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SSX4O60224 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
SSX4O60224 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
SSX4O60224 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
SSX4O60224 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SSX4O60224 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
SSX4O60224 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SSX4O60224 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SSX4O60224 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
SSX4O60224 Y_RNA.3-201ENST00000362331 103 ntBASIC2.92□□□□□ -1.94
SSX4O60224 Y_RNA.111-201ENST00000363248 100 ntBASIC2.92□□□□□ -1.94
SSX4O60224 SNORA46-201ENST00000384762 135 ntBASIC2.92□□□□□ -1.94
SSX4O60224 CISD1P1-201ENST00000393907 327 ntBASIC2.92□□□□□ -1.94
SSX4O60224 AC068050.1-201ENST00000394891 380 ntBASIC2.92□□□□□ -1.94
SSX4O60224 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.92□□□□□ -1.94
SSX4O60224 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.92□□□□□ -1.94
SSX4O60224 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SSX4O60224 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.92□□□□□ -1.94
SSX4O60224 AL353193.1-201ENST00000421444 268 ntBASIC2.92□□□□□ -1.94
SSX4O60224 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.92□□□□□ -1.94
SSX4O60224 AC093151.1-201ENST00000427711 313 ntBASIC2.92□□□□□ -1.94
SSX4O60224 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.92□□□□□ -1.94
SSX4O60224 AL591704.1-201ENST00000432574 275 ntBASIC2.92□□□□□ -1.94
SSX4O60224 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.92□□□□□ -1.94
SSX4O60224 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.92□□□□□ -1.94
SSX4O60224 AL714022.1-201ENST00000439897 151 ntBASIC2.92□□□□□ -1.94
SSX4O60224 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.92□□□□□ -1.94
SSX4O60224 ELOCP23-201ENST00000452014 332 ntBASIC2.92□□□□□ -1.94
SSX4O60224 RNU7-182P-201ENST00000459009 62 ntBASIC2.92□□□□□ -1.94
SSX4O60224 AC006512.1-201ENST00000468816 291 ntBASIC2.92□□□□□ -1.94
SSX4O60224 RPS15AP34-201ENST00000487776 387 ntBASIC2.92□□□□□ -1.94
SSX4O60224 AC139453.3-201ENST00000493276 369 ntBASIC2.92□□□□□ -1.94
SSX4O60224 FCF1P8-201ENST00000510322 597 ntBASIC2.92□□□□□ -1.94
SSX4O60224 RNA5SP217-201ENST00000515959 91 ntBASIC2.92□□□□□ -1.94
SSX4O60224 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.92□□□□□ -1.94
SSX4O60224 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SSX4O60224 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.92□□□□□ -1.94
SSX4O60224 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
SSX4O60224 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.92□□□□□ -1.94
SSX4O60224 AL391261.3-201ENST00000557194 520 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms