Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC114797.1-201ENST00000514003 728 ntBASIC3.42□□□□□ -1.86
SMAD6O43541 RNU4-29P-201ENST00000515943 174 ntBASIC3.42□□□□□ -1.86
SMAD6O43541 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.42□□□□□ -1.86
SMAD6O43541 RN7SKP60-201ENST00000516985 239 ntBASIC3.42□□□□□ -1.86
SMAD6O43541 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SMAD6O43541 OR5BN1P-201ENST00000532955 829 ntBASIC3.42□□□□□ -1.86
SMAD6O43541 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.42□□□□□ -1.86
SMAD6O43541 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.42□□□□□ -1.86
SMAD6O43541 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.42□□□□□ -1.86
SMAD6O43541 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.42□□□□□ -1.86
SMAD6O43541 MIR4425-201ENST00000580572 84 ntBASIC3.42□□□□□ -1.86
SMAD6O43541 MIR3171-201ENST00000584270 74 ntBASIC3.42□□□□□ -1.86
SMAD6O43541 MIR4276-201ENST00000584832 70 ntBASIC3.42□□□□□ -1.86
SMAD6O43541 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.42□□□□□ -1.86
SMAD6O43541 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.42□□□□□ -1.86
SMAD6O43541 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.42□□□□□ -1.86
SMAD6O43541 KC877982.1-201ENST00000602313 470 ntBASIC3.42□□□□□ -1.86
SMAD6O43541 AC004853.1-201ENST00000604902 698 ntBASIC3.42□□□□□ -1.86
SMAD6O43541 AL121992.2-201ENST00000606262 256 ntBASIC3.42□□□□□ -1.86
SMAD6O43541 RNU6-89P-201ENST00000606519 100 ntBASIC3.42□□□□□ -1.86
SMAD6O43541 AC116312.1-201ENST00000606841 314 ntBASIC3.42□□□□□ -1.86
SMAD6O43541 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.42□□□□□ -1.86
SMAD6O43541 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.42□□□□□ -1.86
SMAD6O43541 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.42□□□□□ -1.86
SMAD6O43541 AL133216.2-202ENST00000634512 349 ntBASIC3.42□□□□□ -1.86
SMAD6O43541 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.42□□□□□ -1.86
SMAD6O43541 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SMAD6O43541 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
SMAD6O43541 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
SMAD6O43541 AC009902.3-201ENST00000606235 2172 ntBASIC3.41□□□□□ -1.86
SMAD6O43541 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SMAD6O43541 MAPK10-362ENST00000641864 4484 ntBASIC3.41□□□□□ -1.86
SMAD6O43541 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.41□□□□□ -1.86
SMAD6O43541 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.41□□□□□ -1.86
SMAD6O43541 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SMAD6O43541 Y_RNA.216-201ENST00000364205 93 ntBASIC3.41□□□□□ -1.86
SMAD6O43541 Y_RNA.259-201ENST00000364619 101 ntBASIC3.41□□□□□ -1.86
SMAD6O43541 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.41□□□□□ -1.86
SMAD6O43541 RNU6-738P-201ENST00000384531 106 ntBASIC3.41□□□□□ -1.86
SMAD6O43541 MIR514A2-201ENST00000385131 88 ntBASIC3.41□□□□□ -1.86
SMAD6O43541 MIR514A3-201ENST00000385132 88 ntBASIC3.41□□□□□ -1.86
SMAD6O43541 Y_RNA.579-201ENST00000390939 94 ntBASIC3.41□□□□□ -1.86
SMAD6O43541 AL591034.1-201ENST00000407447 340 ntBASIC3.41□□□□□ -1.86
SMAD6O43541 RNU6-193P-201ENST00000410977 107 ntBASIC3.41□□□□□ -1.86
SMAD6O43541 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.41□□□□□ -1.86
SMAD6O43541 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.41□□□□□ -1.86
SMAD6O43541 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.41□□□□□ -1.86
SMAD6O43541 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.41□□□□□ -1.86
SMAD6O43541 GPM6BP2-201ENST00000432046 144 ntBASIC3.41□□□□□ -1.86
SMAD6O43541 ERLEC1P1-201ENST00000433806 578 ntBASIC3.41□□□□□ -1.86
SMAD6O43541 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.41□□□□□ -1.86
SMAD6O43541 AC093156.1-201ENST00000440382 670 ntBASIC3.41□□□□□ -1.86
SMAD6O43541 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.41□□□□□ -1.86
SMAD6O43541 GPM6BP1-201ENST00000446387 144 ntBASIC3.41□□□□□ -1.86
SMAD6O43541 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.41□□□□□ -1.86
SMAD6O43541 AL590639.1-201ENST00000456484 337 ntBASIC3.41□□□□□ -1.86
SMAD6O43541 AL049714.1-201ENST00000466686 347 ntBASIC3.41□□□□□ -1.86
SMAD6O43541 RN7SL601P-201ENST00000471221 293 ntBASIC3.41□□□□□ -1.86
SMAD6O43541 AC006483.1-201ENST00000487308 313 ntBASIC3.41□□□□□ -1.86
SMAD6O43541 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.41□□□□□ -1.86
SMAD6O43541 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.41□□□□□ -1.86
SMAD6O43541 RN7SKP256-201ENST00000517201 314 ntBASIC3.41□□□□□ -1.86
SMAD6O43541 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.41□□□□□ -1.86
SMAD6O43541 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.41□□□□□ -1.86
SMAD6O43541 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.41□□□□□ -1.86
SMAD6O43541 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.41□□□□□ -1.86
SMAD6O43541 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.41□□□□□ -1.86
SMAD6O43541 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.41□□□□□ -1.86
SMAD6O43541 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.41□□□□□ -1.86
SMAD6O43541 AL162713.1-201ENST00000604480 262 ntBASIC3.41□□□□□ -1.86
SMAD6O43541 AC090971.5-201ENST00000621102 293 ntBASIC3.41□□□□□ -1.86
SMAD6O43541 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.41□□□□□ -1.86
SMAD6O43541 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.41□□□□□ -1.86
SMAD6O43541 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.41□□□□□ -1.86
SMAD6O43541 AC134503.1-201ENST00000633048 54 ntBASIC3.41□□□□□ -1.86
SMAD6O43541 AL079305.1-201ENST00000623159 3008 ntBASIC3.41□□□□□ -1.86
SMAD6O43541 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SMAD6O43541 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.41□□□□□ -1.86
SMAD6O43541 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SMAD6O43541 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.4□□□□□ -1.86
SMAD6O43541 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SMAD6O43541 MTCO1P9-201ENST00000505577 1534 ntBASIC3.4□□□□□ -1.86
SMAD6O43541 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.4□□□□□ -1.86
SMAD6O43541 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.4□□□□□ -1.86
SMAD6O43541 RNU5A-8P-201ENST00000364102 114 ntBASIC3.4□□□□□ -1.87
SMAD6O43541 SNORA63C-201ENST00000364578 129 ntBASIC3.4□□□□□ -1.87
SMAD6O43541 Y_RNA.315-201ENST00000365117 102 ntBASIC3.4□□□□□ -1.87
SMAD6O43541 SNORD82-201ENST00000365530 70 ntBASIC3.4□□□□□ -1.87
SMAD6O43541 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SMAD6O43541 RNU6-474P-201ENST00000384243 107 ntBASIC3.4□□□□□ -1.87
SMAD6O43541 Y_RNA.493-201ENST00000384422 102 ntBASIC3.4□□□□□ -1.87
SMAD6O43541 MIR184-201ENST00000384962 84 ntBASIC3.4□□□□□ -1.87
SMAD6O43541 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SMAD6O43541 AL583834.1-201ENST00000406943 343 ntBASIC3.4□□□□□ -1.87
SMAD6O43541 MIR548P-201ENST00000408336 84 ntBASIC3.4□□□□□ -1.87
SMAD6O43541 HMGN1P24-201ENST00000412282 298 ntBASIC3.4□□□□□ -1.87
SMAD6O43541 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.4□□□□□ -1.87
SMAD6O43541 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SMAD6O43541 AL451054.2-201ENST00000420896 202 ntBASIC3.4□□□□□ -1.87
SMAD6O43541 HSPE1P1-201ENST00000421494 318 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms