Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.14□□□□□ -2.07
LSM1O15116 NACAP2-201ENST00000318548 624 ntBASIC2.14□□□□□ -2.07
LSM1O15116 RNA5SP138-201ENST00000365098 114 ntBASIC2.14□□□□□ -2.07
LSM1O15116 RNU1-148P-201ENST00000384472 162 ntBASIC2.14□□□□□ -2.07
LSM1O15116 RNU6-14P-201ENST00000384630 106 ntBASIC2.14□□□□□ -2.07
LSM1O15116 RPS4XP8-201ENST00000402039 771 ntBASIC2.14□□□□□ -2.07
LSM1O15116 CIR1P3-201ENST00000405137 479 ntBASIC2.14□□□□□ -2.07
LSM1O15116 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.14□□□□□ -2.07
LSM1O15116 GPM6BP2-201ENST00000432046 144 ntBASIC2.14□□□□□ -2.07
LSM1O15116 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.14□□□□□ -2.07
LSM1O15116 AC004383.1-201ENST00000438135 289 ntBASIC2.14□□□□□ -2.07
LSM1O15116 AL117351.1-201ENST00000438864 766 ntBASIC2.14□□□□□ -2.07
LSM1O15116 GPM6BP1-201ENST00000446387 144 ntBASIC2.14□□□□□ -2.07
LSM1O15116 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.14□□□□□ -2.07
LSM1O15116 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.14□□□□□ -2.07
LSM1O15116 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.14□□□□□ -2.07
LSM1O15116 AC010587.2-201ENST00000511727 448 ntBASIC2.14□□□□□ -2.07
LSM1O15116 MIR892C-201ENST00000516410 77 ntBASIC2.14□□□□□ -2.07
LSM1O15116 RNU6-64P-201ENST00000517119 105 ntBASIC2.14□□□□□ -2.07
LSM1O15116 MTCYBP20-201ENST00000524239 1129 ntBASIC2.14□□□□□ -2.07
LSM1O15116 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.14□□□□□ -2.07
LSM1O15116 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.14□□□□□ -2.07
LSM1O15116 AC136618.2-201ENST00000575091 400 ntBASIC2.14□□□□□ -2.07
LSM1O15116 BCRP9-201ENST00000605312 388 ntBASIC2.14□□□□□ -2.07
LSM1O15116 AF129408.1-201ENST00000608767 431 ntBASIC2.14□□□□□ -2.07
LSM1O15116 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.14□□□□□ -2.07
LSM1O15116 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.14□□□□□ -2.07
LSM1O15116 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
LSM1O15116 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
LSM1O15116 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.13□□□□□ -2.07
LSM1O15116 UBE2L2-201ENST00000254302 429 ntBASIC2.13□□□□□ -2.07
LSM1O15116 AC107081.1-201ENST00000414975 361 ntBASIC2.13□□□□□ -2.07
LSM1O15116 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.13□□□□□ -2.07
LSM1O15116 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.13□□□□□ -2.07
LSM1O15116 BX276092.3-201ENST00000424182 230 ntBASIC2.13□□□□□ -2.07
LSM1O15116 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.13□□□□□ -2.07
LSM1O15116 RPL36AP53-201ENST00000432891 316 ntBASIC2.13□□□□□ -2.07
LSM1O15116 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.13□□□□□ -2.07
LSM1O15116 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.13□□□□□ -2.07
LSM1O15116 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.13□□□□□ -2.07
LSM1O15116 AC104090.1-201ENST00000506341 1171 ntBASIC2.13□□□□□ -2.07
LSM1O15116 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.13□□□□□ -2.07
LSM1O15116 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.13□□□□□ -2.07
LSM1O15116 AL133241.1-201ENST00000556832 487 ntBASIC2.13□□□□□ -2.07
LSM1O15116 ANP32BP3-201ENST00000559213 706 ntBASIC2.13□□□□□ -2.07
LSM1O15116 AC090079.2-201ENST00000575289 768 ntBASIC2.13□□□□□ -2.07
LSM1O15116 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.13□□□□□ -2.07
LSM1O15116 AC107294.1-201ENST00000609524 467 ntBASIC2.13□□□□□ -2.07
LSM1O15116 AC013470.4-201ENST00000619978 986 ntBASIC2.13□□□□□ -2.07
LSM1O15116 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.13□□□□□ -2.07
LSM1O15116 AL049777.1-201ENST00000622740 518 ntBASIC2.13□□□□□ -2.07
LSM1O15116 AC244517.12-201ENST00000623581 663 ntBASIC2.13□□□□□ -2.07
LSM1O15116 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.13□□□□□ -2.07
LSM1O15116 AP002371.2-201ENST00000624450 503 ntBASIC2.13□□□□□ -2.07
LSM1O15116 AC093591.3-201ENST00000634516 308 ntBASIC2.13□□□□□ -2.07
LSM1O15116 AL359854.1-201ENST00000614203 1594 ntBASIC2.13□□□□□ -2.07
LSM1O15116 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
LSM1O15116 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.13□□□□□ -2.07
LSM1O15116 RNU6-1284P-201ENST00000363701 100 ntBASIC2.12□□□□□ -2.07
LSM1O15116 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
LSM1O15116 MIR1305-201ENST00000408300 86 ntBASIC2.12□□□□□ -2.07
LSM1O15116 RNA5SP338-201ENST00000410495 85 ntBASIC2.12□□□□□ -2.07
LSM1O15116 RNA5SP270-201ENST00000411361 118 ntBASIC2.12□□□□□ -2.07
LSM1O15116 PIGPP2-201ENST00000411569 458 ntBASIC2.12□□□□□ -2.07
LSM1O15116 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.12□□□□□ -2.07
LSM1O15116 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LSM1O15116 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.12□□□□□ -2.07
LSM1O15116 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.12□□□□□ -2.07
LSM1O15116 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.12□□□□□ -2.07
LSM1O15116 AC005410.1-202ENST00000460347 485 ntBASIC2.12□□□□□ -2.07
LSM1O15116 AC126389.1-201ENST00000477436 290 ntBASIC2.12□□□□□ -2.07
LSM1O15116 AC139453.3-201ENST00000493276 369 ntBASIC2.12□□□□□ -2.07
LSM1O15116 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.12□□□□□ -2.07
LSM1O15116 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LSM1O15116 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LSM1O15116 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.12□□□□□ -2.07
LSM1O15116 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.12□□□□□ -2.07
LSM1O15116 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.12□□□□□ -2.07
LSM1O15116 AC012435.1-202ENST00000568772 240 ntBASIC2.12□□□□□ -2.07
LSM1O15116 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.12□□□□□ -2.07
LSM1O15116 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.12□□□□□ -2.07
LSM1O15116 MIR4765-201ENST00000585007 77 ntBASIC2.12□□□□□ -2.07
LSM1O15116 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.12□□□□□ -2.07
LSM1O15116 AC073544.2-201ENST00000601155 540 ntBASIC2.12□□□□□ -2.07
LSM1O15116 AL096840.1-201ENST00000603287 93 ntBASIC2.12□□□□□ -2.07
LSM1O15116 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
LSM1O15116 AC009233.1-201ENST00000616477 371 ntBASIC2.12□□□□□ -2.07
LSM1O15116 SDR42E1P4-201ENST00000620894 481 ntBASIC2.12□□□□□ -2.07
LSM1O15116 AC099654.8-201ENST00000637757 681 ntBASIC2.12□□□□□ -2.07
LSM1O15116 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LSM1O15116 ADAM3A-203ENST00000461344 2157 ntBASIC2.12□□□□□ -2.07
LSM1O15116 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
LSM1O15116 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
LSM1O15116 RNU1-72P-201ENST00000362976 153 ntBASIC2.11□□□□□ -2.07
LSM1O15116 RNU6-512P-201ENST00000364438 103 ntBASIC2.11□□□□□ -2.07
LSM1O15116 Z98749.2-208ENST00000381646 500 ntBASIC2.11□□□□□ -2.07
LSM1O15116 SNORA67.4-201ENST00000384688 142 ntBASIC2.11□□□□□ -2.07
LSM1O15116 MIR221-201ENST00000385135 110 ntBASIC2.11□□□□□ -2.07
LSM1O15116 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.11□□□□□ -2.07
LSM1O15116 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms