Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 MTCO2P23-201ENST00000425216 680 ntBASIC2.99□□□□□ -1.93
CUX2O14529 AC233728.2-201ENST00000425348 757 ntBASIC2.99□□□□□ -1.93
CUX2O14529 AC092648.1-201ENST00000425870 423 ntBASIC2.99□□□□□ -1.93
CUX2O14529 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CUX2O14529 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.99□□□□□ -1.93
CUX2O14529 AL590664.1-201ENST00000448065 339 ntBASIC2.99□□□□□ -1.93
CUX2O14529 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CUX2O14529 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.99□□□□□ -1.93
CUX2O14529 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.99□□□□□ -1.93
CUX2O14529 AC023813.2-201ENST00000564321 469 ntBASIC2.99□□□□□ -1.93
CUX2O14529 AC009712.1-201ENST00000564938 316 ntBASIC2.99□□□□□ -1.93
CUX2O14529 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.99□□□□□ -1.93
CUX2O14529 AL138880.2-201ENST00000616214 239 ntBASIC2.99□□□□□ -1.93
CUX2O14529 AC002550.2-201ENST00000621246 394 ntBASIC2.99□□□□□ -1.93
CUX2O14529 AC090772.4-201ENST00000623599 362 ntBASIC2.99□□□□□ -1.93
CUX2O14529 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC2.99□□□□□ -1.93
CUX2O14529 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CUX2O14529 Y_RNA.68-201ENST00000362881 102 ntBASIC2.98□□□□□ -1.93
CUX2O14529 Y_RNA.393-201ENST00000383936 102 ntBASIC2.98□□□□□ -1.93
CUX2O14529 RNU6-1197P-201ENST00000391183 107 ntBASIC2.98□□□□□ -1.93
CUX2O14529 MIR1284-201ENST00000408337 120 ntBASIC2.98□□□□□ -1.93
CUX2O14529 AL513331.1-201ENST00000411908 397 ntBASIC2.98□□□□□ -1.93
CUX2O14529 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.98□□□□□ -1.93
CUX2O14529 USP9YP11-201ENST00000427537 717 ntBASIC2.98□□□□□ -1.93
CUX2O14529 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.98□□□□□ -1.93
CUX2O14529 MTND5P14-201ENST00000441481 1267 ntBASIC2.98□□□□□ -1.93
CUX2O14529 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.98□□□□□ -1.93
CUX2O14529 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.98□□□□□ -1.93
CUX2O14529 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.98□□□□□ -1.93
CUX2O14529 OR6C7P-201ENST00000547875 934 ntBASIC2.98□□□□□ -1.93
CUX2O14529 AC125611.2-201ENST00000551907 647 ntBASIC2.98□□□□□ -1.93
CUX2O14529 AL161670.1-201ENST00000554348 137 ntBASIC2.98□□□□□ -1.93
CUX2O14529 AL133393.1-201ENST00000603277 287 ntBASIC2.98□□□□□ -1.93
CUX2O14529 AL121917.1-203ENST00000605534 577 ntBASIC2.98□□□□□ -1.93
CUX2O14529 AL157834.3-201ENST00000615543 103 ntBASIC2.98□□□□□ -1.93
CUX2O14529 MIR6788-201ENST00000618842 66 ntBASIC2.98□□□□□ -1.93
CUX2O14529 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
CUX2O14529 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
CUX2O14529 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CUX2O14529 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.97□□□□□ -1.93
CUX2O14529 ZNF29P-201ENST00000225587 168 ntBASIC2.97□□□□□ -1.93
CUX2O14529 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CUX2O14529 RNU5A-1-201ENST00000362698 116 ntBASIC2.97□□□□□ -1.93
CUX2O14529 Y_RNA.192-201ENST00000363977 102 ntBASIC2.97□□□□□ -1.93
CUX2O14529 MIR1290-201ENST00000408735 78 ntBASIC2.97□□□□□ -1.93
CUX2O14529 HSPE1P1-201ENST00000421494 318 ntBASIC2.97□□□□□ -1.93
CUX2O14529 AC018630.2-202ENST00000422992 927 ntBASIC2.97□□□□□ -1.93
CUX2O14529 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.97□□□□□ -1.93
CUX2O14529 AL356867.1-201ENST00000429623 299 ntBASIC2.97□□□□□ -1.93
CUX2O14529 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.97□□□□□ -1.93
CUX2O14529 AC092573.2-201ENST00000434546 243 ntBASIC2.97□□□□□ -1.93
CUX2O14529 AC002381.1-201ENST00000447049 280 ntBASIC2.97□□□□□ -1.93
CUX2O14529 PTENP1-201ENST00000447117 1215 ntBASIC2.97□□□□□ -1.93
CUX2O14529 MTND2P24-201ENST00000453434 806 ntBASIC2.97□□□□□ -1.93
CUX2O14529 SSXP1-201ENST00000453640 473 ntBASIC2.97□□□□□ -1.93
CUX2O14529 DUXAP8-207ENST00000456786 622 ntBASIC2.97□□□□□ -1.93
CUX2O14529 AL049714.1-201ENST00000466686 347 ntBASIC2.97□□□□□ -1.93
CUX2O14529 AC079804.2-201ENST00000490376 200 ntBASIC2.97□□□□□ -1.93
CUX2O14529 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.97□□□□□ -1.93
CUX2O14529 AC011260.1-201ENST00000578420 472 ntBASIC2.97□□□□□ -1.93
CUX2O14529 AC022662.1-201ENST00000580252 331 ntBASIC2.97□□□□□ -1.93
CUX2O14529 AC105224.1-201ENST00000587055 421 ntBASIC2.97□□□□□ -1.93
CUX2O14529 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.97□□□□□ -1.93
CUX2O14529 MTND3P19-201ENST00000603825 345 ntBASIC2.97□□□□□ -1.93
CUX2O14529 AC097478.2-201ENST00000610572 514 ntBASIC2.97□□□□□ -1.93
CUX2O14529 AC022960.3-201ENST00000619794 441 ntBASIC2.97□□□□□ -1.93
CUX2O14529 AC008443.7-201ENST00000622195 246 ntBASIC2.97□□□□□ -1.93
CUX2O14529 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CUX2O14529 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CUX2O14529 RNU6-97P-201ENST00000363387 104 ntBASIC2.96□□□□□ -1.93
CUX2O14529 RNU4-92P-201ENST00000363783 136 ntBASIC2.96□□□□□ -1.93
CUX2O14529 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CUX2O14529 AL356421.1-201ENST00000403255 413 ntBASIC2.96□□□□□ -1.93
CUX2O14529 HMGB3P2-201ENST00000411913 584 ntBASIC2.96□□□□□ -1.93
CUX2O14529 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.96□□□□□ -1.93
CUX2O14529 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.96□□□□□ -1.93
CUX2O14529 RPL26P6-201ENST00000440913 438 ntBASIC2.96□□□□□ -1.93
CUX2O14529 AL031183.1-201ENST00000457667 207 ntBASIC2.96□□□□□ -1.93
CUX2O14529 MEMO1P3-201ENST00000459811 302 ntBASIC2.96□□□□□ -1.93
CUX2O14529 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.96□□□□□ -1.93
CUX2O14529 UBE2V1P12-201ENST00000503954 474 ntBASIC2.96□□□□□ -1.93
CUX2O14529 AC093677.1-201ENST00000514414 678 ntBASIC2.96□□□□□ -1.93
CUX2O14529 RNU6-528P-201ENST00000516926 100 ntBASIC2.96□□□□□ -1.93
CUX2O14529 HMGN1P28-201ENST00000521340 364 ntBASIC2.96□□□□□ -1.93
CUX2O14529 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.96□□□□□ -1.93
CUX2O14529 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.96□□□□□ -1.93
CUX2O14529 DNAJC8P1-201ENST00000554535 372 ntBASIC2.96□□□□□ -1.93
CUX2O14529 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.96□□□□□ -1.93
CUX2O14529 AL049779.4-201ENST00000604500 156 ntBASIC2.96□□□□□ -1.93
CUX2O14529 AC107075.1-201ENST00000613695 314 ntBASIC2.96□□□□□ -1.93
CUX2O14529 AL445264.1-201ENST00000621719 171 ntBASIC2.96□□□□□ -1.93
CUX2O14529 RNU6-1078P-201ENST00000364522 103 ntBASIC2.96□□□□□ -1.94
CUX2O14529 RNU6-1207P-201ENST00000384343 107 ntBASIC2.96□□□□□ -1.94
CUX2O14529 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CUX2O14529 RNA5SP38-201ENST00000410750 119 ntBASIC2.96□□□□□ -1.94
CUX2O14529 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.96□□□□□ -1.94
CUX2O14529 UBE2V1P13-201ENST00000436983 439 ntBASIC2.96□□□□□ -1.94
CUX2O14529 AL031659.1-201ENST00000447075 539 ntBASIC2.96□□□□□ -1.94
CUX2O14529 PAXBP1P1-201ENST00000449315 447 ntBASIC2.96□□□□□ -1.94
CUX2O14529 AL359385.1-201ENST00000456509 365 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 188.8 ms