Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.82□□□□□ -2.12
UPK1AO00322 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.82□□□□□ -2.12
UPK1AO00322 AC010631.1-201ENST00000474150 156 ntBASIC1.82□□□□□ -2.12
UPK1AO00322 AC093809.1-201ENST00000509155 340 ntBASIC1.82□□□□□ -2.12
UPK1AO00322 LTV1P1-201ENST00000510683 1237 ntBASIC1.82□□□□□ -2.12
UPK1AO00322 RNA5SP216-201ENST00000516111 123 ntBASIC1.82□□□□□ -2.12
UPK1AO00322 RNA5SP165-201ENST00000517142 115 ntBASIC1.82□□□□□ -2.12
UPK1AO00322 HSPE1P18-201ENST00000517602 280 ntBASIC1.82□□□□□ -2.12
UPK1AO00322 OR5AQ1P-201ENST00000527596 927 ntBASIC1.82□□□□□ -2.12
UPK1AO00322 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.82□□□□□ -2.12
UPK1AO00322 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.82□□□□□ -2.12
UPK1AO00322 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.82□□□□□ -2.12
UPK1AO00322 MIR4513-201ENST00000581077 86 ntBASIC1.82□□□□□ -2.12
UPK1AO00322 AC007349.4-201ENST00000608114 532 ntBASIC1.82□□□□□ -2.12
UPK1AO00322 AC009090.3-201ENST00000616553 565 ntBASIC1.82□□□□□ -2.12
UPK1AO00322 AP000676.3-201ENST00000623299 569 ntBASIC1.82□□□□□ -2.12
UPK1AO00322 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
UPK1AO00322 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.82□□□□□ -2.12
UPK1AO00322 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
UPK1AO00322 AC104454.1-201ENST00000421341 1401 ntBASIC1.82□□□□□ -2.12
UPK1AO00322 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.81□□□□□ -2.12
UPK1AO00322 U8.2-201ENST00000363156 134 ntBASIC1.81□□□□□ -2.12
UPK1AO00322 RNU6-1167P-201ENST00000363227 94 ntBASIC1.81□□□□□ -2.12
UPK1AO00322 RNU6-777P-201ENST00000364265 104 ntBASIC1.81□□□□□ -2.12
UPK1AO00322 RNA5SP126-201ENST00000365092 109 ntBASIC1.81□□□□□ -2.12
UPK1AO00322 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.81□□□□□ -2.12
UPK1AO00322 USP9YP26-201ENST00000421008 661 ntBASIC1.81□□□□□ -2.12
UPK1AO00322 AC007560.1-201ENST00000426912 237 ntBASIC1.81□□□□□ -2.12
UPK1AO00322 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.81□□□□□ -2.12
UPK1AO00322 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.81□□□□□ -2.12
UPK1AO00322 GPM6BP3-201ENST00000442797 145 ntBASIC1.81□□□□□ -2.12
UPK1AO00322 ANKRD26P4-201ENST00000455755 950 ntBASIC1.81□□□□□ -2.12
UPK1AO00322 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.81□□□□□ -2.12
UPK1AO00322 AC116353.3-201ENST00000511215 249 ntBASIC1.81□□□□□ -2.12
UPK1AO00322 SCARNA3-201ENST00000517097 143 ntBASIC1.81□□□□□ -2.12
UPK1AO00322 FAM92A1P1-201ENST00000528023 890 ntBASIC1.81□□□□□ -2.12
UPK1AO00322 AC010186.2-204ENST00000537668 439 ntBASIC1.81□□□□□ -2.12
UPK1AO00322 MIR5571-201ENST00000577998 113 ntBASIC1.81□□□□□ -2.12
UPK1AO00322 MIR3167-201ENST00000579623 85 ntBASIC1.81□□□□□ -2.12
UPK1AO00322 UBE2L4-201ENST00000587688 464 ntBASIC1.81□□□□□ -2.12
UPK1AO00322 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.81□□□□□ -2.12
UPK1AO00322 AL355598.1-201ENST00000604169 202 ntBASIC1.81□□□□□ -2.12
UPK1AO00322 AL021997.1-201ENST00000605757 193 ntBASIC1.81□□□□□ -2.12
UPK1AO00322 AL589743.7-201ENST00000612637 233 ntBASIC1.81□□□□□ -2.12
UPK1AO00322 AL158801.5-201ENST00000623123 465 ntBASIC1.81□□□□□ -2.12
UPK1AO00322 KPNA2P1-201ENST00000458289 1591 ntBASIC1.81□□□□□ -2.12
UPK1AO00322 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
UPK1AO00322 MTND5P30-201ENST00000452896 1731 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 ZNF355P-201ENST00000427301 3216 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
UPK1AO00322 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
UPK1AO00322 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
UPK1AO00322 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.8□□□□□ -2.12
UPK1AO00322 RNU6-778P-201ENST00000363269 103 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 RNA5SP88-201ENST00000365560 109 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 RNU6-253P-201ENST00000384730 105 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 AL079342.1-201ENST00000401460 267 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 ERHP2-201ENST00000402323 299 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 MTATP6P20-201ENST00000414147 562 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 RPS3AP37-201ENST00000419176 745 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 SKA2P1-201ENST00000425592 390 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 AC244035.1-201ENST00000430042 390 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 GPM6BP2-201ENST00000432046 144 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.8□□□□□ -2.12
UPK1AO00322 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.8□□□□□ -2.12
UPK1AO00322 GPM6BP1-201ENST00000446387 144 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
UPK1AO00322 AP000542.1-201ENST00000448473 371 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.8□□□□□ -2.12
UPK1AO00322 TRBV12-1-201ENST00000479785 344 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.8□□□□□ -2.12
UPK1AO00322 RPS29P21-201ENST00000496272 170 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 RPL38P4-201ENST00000502376 214 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.8□□□□□ -2.12
UPK1AO00322 AC093281.2-201ENST00000510153 597 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.8□□□□□ -2.12
UPK1AO00322 SNORA31.6-201ENST00000516241 130 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.8□□□□□ -2.12
UPK1AO00322 AL133153.1-201ENST00000557756 303 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 AP001269.3-201ENST00000588718 329 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.8□□□□□ -2.12
UPK1AO00322 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.8□□□□□ -2.12
UPK1AO00322 AL391813.1-201ENST00000603098 260 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 DPPA3P3-201ENST00000603842 430 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 AL121652.1-201ENST00000608851 448 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 AC018645.2-201ENST00000609151 472 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.8□□□□□ -2.12
UPK1AO00322 AC010678.1-201ENST00000614118 713 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 AC079416.3-201ENST00000624479 549 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 AC097655.1-201ENST00000635075 318 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 AC099786.3-201ENST00000565735 1410 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 AC092881.1-201ENST00000638218 2733 ntBASIC1.8□□□□□ -2.12
UPK1AO00322 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.79□□□□□ -2.12
UPK1AO00322 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.79□□□□□ -2.12
UPK1AO00322 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.79□□□□□ -2.12
UPK1AO00322 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.79□□□□□ -2.12
UPK1AO00322 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
UPK1AO00322 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
UPK1AO00322 Y_RNA.192-201ENST00000363977 102 ntBASIC1.79□□□□□ -2.12
UPK1AO00322 AL359704.1-201ENST00000411586 781 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms