Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 COX7A2P2-201ENST00000505291 250 ntBASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 MIR4765-201ENST00000585007 77 ntBASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 TUG1_1.1-201ENST00000610654 145 ntBASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 AC092140.2-201ENST00000618027 521 ntBASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 MTCO1P18-201ENST00000455518 1419 ntBASIC0.92□□□□□ -2.26
TCRBV3S1A0A5B6 CBX3P1-201ENST00000325243 554 ntBASIC0.92□□□□□ -2.26
TCRBV3S1A0A5B6 RNU6-251P-201ENST00000363235 104 ntBASIC0.92□□□□□ -2.26
TCRBV3S1A0A5B6 RNU4-38P-201ENST00000364472 129 ntBASIC0.92□□□□□ -2.26
TCRBV3S1A0A5B6 RNU6-741P-201ENST00000383889 107 ntBASIC0.92□□□□□ -2.26
TCRBV3S1A0A5B6 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.92□□□□□ -2.26
TCRBV3S1A0A5B6 AC005345.1-201ENST00000431868 217 ntBASIC0.92□□□□□ -2.26
TCRBV3S1A0A5B6 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.92□□□□□ -2.26
TCRBV3S1A0A5B6 MTND2P21-201ENST00000436242 1042 ntBASIC0.92□□□□□ -2.26
TCRBV3S1A0A5B6 FABP5P14-201ENST00000437273 393 ntBASIC0.92□□□□□ -2.26
TCRBV3S1A0A5B6 AC098831.1-201ENST00000440661 216 ntBASIC0.92□□□□□ -2.26
TCRBV3S1A0A5B6 AC079448.1-201ENST00000449377 373 ntBASIC0.92□□□□□ -2.26
TCRBV3S1A0A5B6 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.92□□□□□ -2.26
TCRBV3S1A0A5B6 OR2A41P-201ENST00000473586 105 ntBASIC0.92□□□□□ -2.26
TCRBV3S1A0A5B6 AC099513.1-201ENST00000490423 301 ntBASIC0.92□□□□□ -2.26
TCRBV3S1A0A5B6 RPS27AP10-201ENST00000496103 208 ntBASIC0.92□□□□□ -2.26
TCRBV3S1A0A5B6 AC084024.2-201ENST00000503480 791 ntBASIC0.92□□□□□ -2.26
TCRBV3S1A0A5B6 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.92□□□□□ -2.26
TCRBV3S1A0A5B6 SNORA4.4-201ENST00000515921 135 ntBASIC0.92□□□□□ -2.26
TCRBV3S1A0A5B6 AC034114.1-201ENST00000520293 285 ntBASIC0.92□□□□□ -2.26
TCRBV3S1A0A5B6 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
TCRBV3S1A0A5B6 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.92□□□□□ -2.26
TCRBV3S1A0A5B6 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.92□□□□□ -2.26
TCRBV3S1A0A5B6 MIR4295-201ENST00000585286 85 ntBASIC0.92□□□□□ -2.26
TCRBV3S1A0A5B6 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.92□□□□□ -2.26
TCRBV3S1A0A5B6 AC005261.5-201ENST00000596280 355 ntBASIC0.92□□□□□ -2.26
TCRBV3S1A0A5B6 AC104763.2-201ENST00000604179 382 ntBASIC0.92□□□□□ -2.26
TCRBV3S1A0A5B6 AC021646.1-201ENST00000605469 484 ntBASIC0.92□□□□□ -2.26
TCRBV3S1A0A5B6 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.92□□□□□ -2.26
TCRBV3S1A0A5B6 RNU6-486P-201ENST00000363116 107 ntBASIC0.91□□□□□ -2.26
TCRBV3S1A0A5B6 RNU6-40P-201ENST00000384254 107 ntBASIC0.91□□□□□ -2.26
TCRBV3S1A0A5B6 RNU2-63P-201ENST00000410792 194 ntBASIC0.91□□□□□ -2.26
TCRBV3S1A0A5B6 AC009310.1-201ENST00000414414 451 ntBASIC0.91□□□□□ -2.26
TCRBV3S1A0A5B6 ZDHHC20P2-201ENST00000424108 429 ntBASIC0.91□□□□□ -2.26
TCRBV3S1A0A5B6 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.91□□□□□ -2.26
TCRBV3S1A0A5B6 RSU1P2-202ENST00000437884 485 ntBASIC0.91□□□□□ -2.26
TCRBV3S1A0A5B6 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.91□□□□□ -2.26
TCRBV3S1A0A5B6 AC117503.1-201ENST00000472241 394 ntBASIC0.91□□□□□ -2.26
TCRBV3S1A0A5B6 AC139453.3-201ENST00000493276 369 ntBASIC0.91□□□□□ -2.26
TCRBV3S1A0A5B6 AC117522.2-201ENST00000510049 657 ntBASIC0.91□□□□□ -2.26
TCRBV3S1A0A5B6 AC119751.5-201ENST00000514077 770 ntBASIC0.91□□□□□ -2.26
TCRBV3S1A0A5B6 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.91□□□□□ -2.26
TCRBV3S1A0A5B6 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC0.91□□□□□ -2.26
TCRBV3S1A0A5B6 AC023825.1-201ENST00000566704 1030 ntBASIC0.91□□□□□ -2.26
TCRBV3S1A0A5B6 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.91□□□□□ -2.26
TCRBV3S1A0A5B6 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.91□□□□□ -2.26
TCRBV3S1A0A5B6 AP000238.1-201ENST00000608759 426 ntBASIC0.91□□□□□ -2.26
TCRBV3S1A0A5B6 AC009974.1-201ENST00000608881 455 ntBASIC0.91□□□□□ -2.26
TCRBV3S1A0A5B6 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.91□□□□□ -2.26
TCRBV3S1A0A5B6 MTND1P37-201ENST00000636562 264 ntBASIC0.91□□□□□ -2.26
TCRBV3S1A0A5B6 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.91□□□□□ -2.26
TCRBV3S1A0A5B6 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.9□□□□□ -2.26
TCRBV3S1A0A5B6 Y_RNA.67-201ENST00000362870 100 ntBASIC0.9□□□□□ -2.27
TCRBV3S1A0A5B6 RNU6-457P-201ENST00000363999 107 ntBASIC0.9□□□□□ -2.27
TCRBV3S1A0A5B6 U8.10-201ENST00000384260 133 ntBASIC0.9□□□□□ -2.27
TCRBV3S1A0A5B6 RNU6-878P-201ENST00000384578 110 ntBASIC0.9□□□□□ -2.27
TCRBV3S1A0A5B6 MIR634-201ENST00000385208 97 ntBASIC0.9□□□□□ -2.27
TCRBV3S1A0A5B6 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC0.9□□□□□ -2.27
TCRBV3S1A0A5B6 MIR1289-2-201ENST00000408360 111 ntBASIC0.9□□□□□ -2.27
TCRBV3S1A0A5B6 AL121882.1-201ENST00000422893 417 ntBASIC0.9□□□□□ -2.27
TCRBV3S1A0A5B6 PPP1R11P2-201ENST00000423543 382 ntBASIC0.9□□□□□ -2.27
TCRBV3S1A0A5B6 AL353691.1-201ENST00000451332 387 ntBASIC0.9□□□□□ -2.27
TCRBV3S1A0A5B6 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.9□□□□□ -2.27
TCRBV3S1A0A5B6 RN7SKP210-201ENST00000459176 261 ntBASIC0.9□□□□□ -2.27
TCRBV3S1A0A5B6 AC132942.1-201ENST00000486753 483 ntBASIC0.9□□□□□ -2.27
TCRBV3S1A0A5B6 AC018868.1-201ENST00000491307 315 ntBASIC0.9□□□□□ -2.27
TCRBV3S1A0A5B6 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.9□□□□□ -2.27
TCRBV3S1A0A5B6 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC0.9□□□□□ -2.27
TCRBV3S1A0A5B6 AP000916.1-201ENST00000533869 835 ntBASIC0.9□□□□□ -2.27
TCRBV3S1A0A5B6 AC019288.1-201ENST00000557918 224 ntBASIC0.9□□□□□ -2.27
TCRBV3S1A0A5B6 AC027807.1-201ENST00000559921 996 ntBASIC0.9□□□□□ -2.27
TCRBV3S1A0A5B6 SULT1C2P1-202ENST00000562418 459 ntBASIC0.9□□□□□ -2.27
TCRBV3S1A0A5B6 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.9□□□□□ -2.27
TCRBV3S1A0A5B6 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC0.9□□□□□ -2.27
TCRBV3S1A0A5B6 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC0.9□□□□□ -2.27
TCRBV3S1A0A5B6 AC004067.1-201ENST00000608733 700 ntBASIC0.9□□□□□ -2.27
TCRBV3S1A0A5B6 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.9□□□□□ -2.27
TCRBV3S1A0A5B6 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.9□□□□□ -2.27
TCRBV3S1A0A5B6 AL118508.4-201ENST00000624142 1176 ntBASIC0.9□□□□□ -2.27
TCRBV3S1A0A5B6 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
TCRBV3S1A0A5B6 AC110491.1-201ENST00000562191 2010 ntBASIC0.89□□□□□ -2.27
TCRBV3S1A0A5B6 AL359854.1-201ENST00000614203 1594 ntBASIC0.89□□□□□ -2.27
TCRBV3S1A0A5B6 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
TCRBV3S1A0A5B6 RNU6-619P-201ENST00000365146 108 ntBASIC0.89□□□□□ -2.27
TCRBV3S1A0A5B6 MIR95-201ENST00000385072 81 ntBASIC0.89□□□□□ -2.27
TCRBV3S1A0A5B6 MIR1283-2-201ENST00000408621 87 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms