Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC244035.1-201ENST00000430042 390 ntBASIC2.42□□□□□ -2.02
SMIM28A0A1B0GU29 USP12PX-201ENST00000432383 1057 ntBASIC2.42□□□□□ -2.02
SMIM28A0A1B0GU29 UBBP3-201ENST00000445497 241 ntBASIC2.42□□□□□ -2.02
SMIM28A0A1B0GU29 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.42□□□□□ -2.02
SMIM28A0A1B0GU29 AP000705.1-201ENST00000454567 350 ntBASIC2.42□□□□□ -2.02
SMIM28A0A1B0GU29 MTCO2P6-201ENST00000463134 685 ntBASIC2.42□□□□□ -2.02
SMIM28A0A1B0GU29 AP000797.1-201ENST00000478870 387 ntBASIC2.42□□□□□ -2.02
SMIM28A0A1B0GU29 AC233702.1-201ENST00000482905 502 ntBASIC2.42□□□□□ -2.02
SMIM28A0A1B0GU29 AC114797.1-201ENST00000514003 728 ntBASIC2.42□□□□□ -2.02
SMIM28A0A1B0GU29 RNA5SP471-201ENST00000516971 106 ntBASIC2.42□□□□□ -2.02
SMIM28A0A1B0GU29 AC026407.1-201ENST00000518369 204 ntBASIC2.42□□□□□ -2.02
SMIM28A0A1B0GU29 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.42□□□□□ -2.02
SMIM28A0A1B0GU29 AC004486.1-201ENST00000546846 233 ntBASIC2.42□□□□□ -2.02
SMIM28A0A1B0GU29 MIR3915-201ENST00000578518 97 ntBASIC2.42□□□□□ -2.02
SMIM28A0A1B0GU29 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.42□□□□□ -2.02
SMIM28A0A1B0GU29 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.42□□□□□ -2.02
SMIM28A0A1B0GU29 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.42□□□□□ -2.02
SMIM28A0A1B0GU29 AC136601.2-201ENST00000604356 474 ntBASIC2.42□□□□□ -2.02
SMIM28A0A1B0GU29 AC099654.13-201ENST00000639774 207 ntBASIC2.42□□□□□ -2.02
SMIM28A0A1B0GU29 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.42□□□□□ -2.02
SMIM28A0A1B0GU29 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
SMIM28A0A1B0GU29 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SMIM28A0A1B0GU29 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.42□□□□□ -2.02
SMIM28A0A1B0GU29 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
SMIM28A0A1B0GU29 MIR6073-201ENST00000352083 89 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 SNORA25.6-201ENST00000364121 118 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 RNY3P13-201ENST00000365542 102 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 RPL21P75-201ENST00000396599 483 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 RPL21P28-201ENST00000401418 483 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 AL592114.1-201ENST00000403842 483 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 AL139095.1-201ENST00000404326 391 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 RNA5SP492-201ENST00000411330 114 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 MTND4P20-201ENST00000424125 869 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 AC092427.1-202ENST00000430569 476 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 AC096638.1-201ENST00000444678 216 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 AL513124.1-201ENST00000450410 614 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 AL590365.1-201ENST00000450788 243 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 RPL12P25-201ENST00000455592 494 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 AC108059.3-201ENST00000456388 214 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 RPL21P39-201ENST00000463605 483 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 RPL21P93-201ENST00000480465 489 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 AC087190.1-201ENST00000484462 480 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 AC093591.1-201ENST00000491435 481 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 RPL9P6-201ENST00000492764 598 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 RPL21P16-201ENST00000495531 483 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 OR5BM1P-201ENST00000512021 366 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 MTND5P13-201ENST00000513046 1079 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 RNU6-1282P-201ENST00000516735 96 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 RNU6-826P-201ENST00000516827 104 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 AC106038.2-201ENST00000520706 568 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 AP003122.4-201ENST00000530980 758 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 AC007536.1-201ENST00000533382 349 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 ARL2BPP2-201ENST00000550907 489 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 MIR3118-1-201ENST00000581787 76 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 MIR3670-2-201ENST00000582974 65 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 MIR3670-1-201ENST00000584160 65 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 MIR3670-3-201ENST00000584855 65 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 AP001981.2-201ENST00000603241 418 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 AC092354.1-201ENST00000606057 376 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 AL031775.1-201ENST00000607014 887 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 MIR3670-4-201ENST00000612260 65 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 AC122133.1-201ENST00000613964 233 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 AC027807.2-201ENST00000616099 408 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 uc_338.12-201ENST00000616344 181 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 MIR6873-201ENST00000622788 63 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 AC073308.1-201ENST00000623696 305 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 AC110079.1-202ENST00000635213 138 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 AC008669.1-201ENST00000565823 2178 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.41□□□□□ -2.02
SMIM28A0A1B0GU29 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SMIM28A0A1B0GU29 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.02
SMIM28A0A1B0GU29 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 RNU4-1-201ENST00000363925 141 ntBASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 U8.9-201ENST00000365667 134 ntBASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 SNORD115.1-201ENST00000391109 76 ntBASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 RNU2-36P-201ENST00000410361 191 ntBASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 AL513477.1-202ENST00000417061 214 ntBASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 AC093106.2-201ENST00000428212 385 ntBASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 AL714022.1-201ENST00000439897 151 ntBASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms