Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 MTND5P29-201ENST00000458676 1807 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 RNU6-486P-201ENST00000363116 107 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 RNU6-343P-201ENST00000364709 104 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 RNU6-748P-201ENST00000384648 107 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 SNORD65.1-201ENST00000390889 71 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 MCTS2P-201ENST00000394552 546 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 HMGN2P39-201ENST00000398005 273 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 NDUFS5P1-201ENST00000405668 289 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 RNU4-26P-201ENST00000410270 107 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 AL161449.1-201ENST00000414531 1199 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 RPS24P7-201ENST00000416921 246 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 AL445669.1-201ENST00000426743 755 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 FABP5P14-201ENST00000437273 393 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 USP9YP22-201ENST00000438971 294 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 MTND2P20-201ENST00000440805 661 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 AC002381.1-201ENST00000447049 280 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 MTND1P9-201ENST00000453775 944 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 snoU13.15-201ENST00000459407 104 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 AC068587.2-201ENST00000478386 781 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 AC055855.1-201ENST00000489563 579 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 RPL38P4-201ENST00000502376 214 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 RNA5SP182-201ENST00000516064 82 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 RNU6-714P-201ENST00000516963 103 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 AP005597.4-201ENST00000526762 229 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 AP003497.1-201ENST00000528472 562 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 AC233702.2-202ENST00000562547 291 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 MIR4299-201ENST00000577899 72 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 AC002545.1-201ENST00000592511 181 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 AL138963.2-201ENST00000605137 226 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 AC004805.2-201ENST00000605382 482 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 AC007038.2-201ENST00000608095 740 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 AC005332.6-201ENST00000613178 446 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 AC010133.1-201ENST00000615809 842 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 AL445264.1-201ENST00000621719 171 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 AL359757.2-201ENST00000624309 274 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 AC079416.3-201ENST00000624479 549 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 HPVC1-201ENST00000629899 1198 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 AL359854.1-201ENST00000614203 1594 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 CDC27P3-201ENST00000635418 1910 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 ZNF876P-202ENST00000398732 1485 ntBASIC1.24□□□□□ -2.21
TRAV1-1A0A0B4J248 ZNF702P-202ENST00000434269 1966 ntBASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 RNU6-1078P-201ENST00000364522 103 ntBASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 RNU6-707P-201ENST00000364647 95 ntBASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 RNU6-354P-201ENST00000383862 107 ntBASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 RNU6-610P-201ENST00000384264 107 ntBASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 MIR583-201ENST00000384846 75 ntBASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 MTND1P21-201ENST00000412991 285 ntBASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 RPL26P27-201ENST00000414397 437 ntBASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 AL353729.1-201ENST00000425044 720 ntBASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 AC092634.2-201ENST00000428146 1010 ntBASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 SEPT7P5-201ENST00000434048 306 ntBASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 RSL24D1P8-201ENST00000434442 492 ntBASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 RPL7P54-201ENST00000438336 674 ntBASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 RNU1-41P-201ENST00000516161 162 ntBASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 RNU1-48P-201ENST00000516400 162 ntBASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 MIR7843-201ENST00000622274 79 ntBASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
TRAV1-1A0A0B4J248 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 RNA5SP88-201ENST00000365560 109 ntBASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 RNU6-207P-201ENST00000384137 107 ntBASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 RPL22P22-201ENST00000395439 379 ntBASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 DPRXP1-201ENST00000426312 460 ntBASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 VN1R108P-201ENST00000431580 830 ntBASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 AC003989.2-201ENST00000440224 169 ntBASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 AL353718.1-201ENST00000451028 517 ntBASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 AC013267.1-201ENST00000458227 267 ntBASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 AC005410.1-202ENST00000460347 485 ntBASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 AC117503.1-201ENST00000472241 394 ntBASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 AC023790.1-201ENST00000482174 347 ntBASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 152.2 ms