Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.77□□□□□ -2.29
TRAV1-2A0A0B4J238 AL359212.1-201ENST00000556608 614 ntBASIC0.77□□□□□ -2.29
TRAV1-2A0A0B4J238 AL158827.2-201ENST00000602494 330 ntBASIC0.77□□□□□ -2.29
TRAV1-2A0A0B4J238 AL157834.3-201ENST00000615543 103 ntBASIC0.77□□□□□ -2.29
TRAV1-2A0A0B4J238 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.77□□□□□ -2.29
TRAV1-2A0A0B4J238 AL691447.3-201ENST00000635020 330 ntBASIC0.77□□□□□ -2.29
TRAV1-2A0A0B4J238 MIR424-201ENST00000362227 98 ntBASIC0.76□□□□□ -2.29
TRAV1-2A0A0B4J238 RN7SKP61-201ENST00000410642 295 ntBASIC0.76□□□□□ -2.29
TRAV1-2A0A0B4J238 RNU2-15P-201ENST00000410692 191 ntBASIC0.76□□□□□ -2.29
TRAV1-2A0A0B4J238 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAV1-2A0A0B4J238 AC009310.1-201ENST00000414414 451 ntBASIC0.76□□□□□ -2.29
TRAV1-2A0A0B4J238 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC0.76□□□□□ -2.29
TRAV1-2A0A0B4J238 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAV1-2A0A0B4J238 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAV1-2A0A0B4J238 ZDHHC20P2-201ENST00000424108 429 ntBASIC0.76□□□□□ -2.29
TRAV1-2A0A0B4J238 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAV1-2A0A0B4J238 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.76□□□□□ -2.29
TRAV1-2A0A0B4J238 RSU1P2-202ENST00000437884 485 ntBASIC0.76□□□□□ -2.29
TRAV1-2A0A0B4J238 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAV1-2A0A0B4J238 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.76□□□□□ -2.29
TRAV1-2A0A0B4J238 MTCO3P2-201ENST00000457365 171 ntBASIC0.76□□□□□ -2.29
TRAV1-2A0A0B4J238 snoU13.26-201ENST00000459452 105 ntBASIC0.76□□□□□ -2.29
TRAV1-2A0A0B4J238 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.76□□□□□ -2.29
TRAV1-2A0A0B4J238 RNU6-351P-201ENST00000516097 100 ntBASIC0.76□□□□□ -2.29
TRAV1-2A0A0B4J238 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAV1-2A0A0B4J238 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAV1-2A0A0B4J238 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.76□□□□□ -2.29
TRAV1-2A0A0B4J238 MIR4765-201ENST00000585007 77 ntBASIC0.76□□□□□ -2.29
TRAV1-2A0A0B4J238 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAV1-2A0A0B4J238 AC123912.5-201ENST00000605470 343 ntBASIC0.76□□□□□ -2.29
TRAV1-2A0A0B4J238 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAV1-2A0A0B4J238 AP003485.1-201ENST00000625093 753 ntBASIC0.76□□□□□ -2.29
TRAV1-2A0A0B4J238 AC241585.2-209ENST00000638217 143 ntBASIC0.76□□□□□ -2.29
TRAV1-2A0A0B4J238 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
TRAV1-2A0A0B4J238 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 AP000776.1-201ENST00000530032 1663 ntBASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 RNU6-884P-201ENST00000363889 107 ntBASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 SNORD114-2-201ENST00000363953 78 ntBASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 SNORA51.6-201ENST00000384151 125 ntBASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 RNU6-140P-201ENST00000384566 108 ntBASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 RNU2-63P-201ENST00000410792 194 ntBASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 FABP5P14-201ENST00000437273 393 ntBASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 THAP5P1-201ENST00000439089 262 ntBASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 AC098831.1-201ENST00000440661 216 ntBASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 RPS27P1-201ENST00000450552 247 ntBASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 AC021382.1-201ENST00000483523 359 ntBASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 AL049874.1-201ENST00000489560 388 ntBASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 AC099513.1-201ENST00000490423 301 ntBASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 AC103851.1-201ENST00000506833 274 ntBASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 SNORA4.4-201ENST00000515921 135 ntBASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 AC104763.2-201ENST00000604179 382 ntBASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 AC136601.2-201ENST00000604356 474 ntBASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 AL031176.1-201ENST00000604554 466 ntBASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 AC013412.1-201ENST00000610687 192 ntBASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 MIR6078-201ENST00000611069 100 ntBASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 AC007490.1-201ENST00000624321 703 ntBASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 AC083865.1-201ENST00000636634 831 ntBASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 ICE2P2-201ENST00000483823 2787 ntBASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.75□□□□□ -2.29
TRAV1-2A0A0B4J238 AC110491.1-201ENST00000562191 2010 ntBASIC0.74□□□□□ -2.29
TRAV1-2A0A0B4J238 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
TRAV1-2A0A0B4J238 RNU6-486P-201ENST00000363116 107 ntBASIC0.74□□□□□ -2.29
TRAV1-2A0A0B4J238 MIR95-201ENST00000385072 81 ntBASIC0.74□□□□□ -2.29
TRAV1-2A0A0B4J238 MIR30A-201ENST00000385092 71 ntBASIC0.74□□□□□ -2.29
TRAV1-2A0A0B4J238 AL109755.1-201ENST00000401791 649 ntBASIC0.74□□□□□ -2.29
TRAV1-2A0A0B4J238 SNORA11.2-201ENST00000408318 127 ntBASIC0.74□□□□□ -2.29
TRAV1-2A0A0B4J238 MIR1283-2-201ENST00000408621 87 ntBASIC0.74□□□□□ -2.29
TRAV1-2A0A0B4J238 ZNF863P-201ENST00000426746 417 ntBASIC0.74□□□□□ -2.29
TRAV1-2A0A0B4J238 AC104997.1-201ENST00000519761 717 ntBASIC0.74□□□□□ -2.29
TRAV1-2A0A0B4J238 AC087441.2-201ENST00000529141 262 ntBASIC0.74□□□□□ -2.29
TRAV1-2A0A0B4J238 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.74□□□□□ -2.29
TRAV1-2A0A0B4J238 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV1-2A0A0B4J238 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.74□□□□□ -2.29
TRAV1-2A0A0B4J238 AL132857.1-201ENST00000555180 708 ntBASIC0.74□□□□□ -2.29
TRAV1-2A0A0B4J238 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.74□□□□□ -2.29
TRAV1-2A0A0B4J238 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms