Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL4A3BPQ9Y5P4 Y_RNA.89-201ENST00000363031 102 ntBASIC4.13□□□□□ -1.75
COL4A3BPQ9Y5P4 RNU6-393P-201ENST00000384475 107 ntBASIC4.13□□□□□ -1.75
COL4A3BPQ9Y5P4 RNU6-658P-201ENST00000384606 106 ntBASIC4.13□□□□□ -1.75
COL4A3BPQ9Y5P4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
COL4A3BPQ9Y5P4 RPL21P90-201ENST00000415692 466 ntBASIC4.13□□□□□ -1.75
COL4A3BPQ9Y5P4 ARL5AP1-201ENST00000418991 388 ntBASIC4.13□□□□□ -1.75
COL4A3BPQ9Y5P4 AC007560.1-201ENST00000426912 237 ntBASIC4.13□□□□□ -1.75
COL4A3BPQ9Y5P4 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.13□□□□□ -1.75
COL4A3BPQ9Y5P4 AL078601.1-201ENST00000444542 271 ntBASIC4.13□□□□□ -1.75
COL4A3BPQ9Y5P4 SCARNA18-201ENST00000459004 134 ntBASIC4.13□□□□□ -1.75
COL4A3BPQ9Y5P4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.13□□□□□ -1.75
COL4A3BPQ9Y5P4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL4A3BPQ9Y5P4 RN7SKP83-201ENST00000516512 178 ntBASIC4.13□□□□□ -1.75
COL4A3BPQ9Y5P4 RNU6-572P-201ENST00000516724 80 ntBASIC4.13□□□□□ -1.75
COL4A3BPQ9Y5P4 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.13□□□□□ -1.75
COL4A3BPQ9Y5P4 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.13□□□□□ -1.75
COL4A3BPQ9Y5P4 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.13□□□□□ -1.75
COL4A3BPQ9Y5P4 MIR3941-201ENST00000582572 103 ntBASIC4.13□□□□□ -1.75
COL4A3BPQ9Y5P4 AL356321.1-201ENST00000621360 228 ntBASIC4.13□□□□□ -1.75
COL4A3BPQ9Y5P4 AL034408.1-202ENST00000636088 415 ntBASIC4.13□□□□□ -1.75
COL4A3BPQ9Y5P4 ASNSP3-201ENST00000451989 1306 ntBASIC4.13□□□□□ -1.75
COL4A3BPQ9Y5P4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL4A3BPQ9Y5P4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
COL4A3BPQ9Y5P4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 Y_RNA.295-201ENST00000364918 102 ntBASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 RNU6-45P-201ENST00000384471 107 ntBASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 RNU6-1127P-201ENST00000384580 107 ntBASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 RNU6-1179P-201ENST00000384667 107 ntBASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 MIR449B-201ENST00000384995 97 ntBASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 SNORA40C-201ENST00000391285 128 ntBASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 SYF2P2-201ENST00000417620 583 ntBASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 HSPE1P1-201ENST00000421494 318 ntBASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 MYL8P-204ENST00000431574 518 ntBASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 AC092473.1-201ENST00000441098 221 ntBASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 AC092989.1-201ENST00000481235 277 ntBASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 AC112206.3-201ENST00000514578 389 ntBASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 AC007014.2-201ENST00000615581 479 ntBASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 AC244205.2-202ENST00000635781 342 ntBASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL4A3BPQ9Y5P4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 SNORA71.3-201ENST00000362582 128 ntBASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 Y_RNA.38-201ENST00000362617 102 ntBASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 RNU6-371P-201ENST00000364283 108 ntBASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 Y_RNA.256-201ENST00000364594 104 ntBASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 RNA5SP51-201ENST00000364750 119 ntBASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 RNU6-534P-201ENST00000364877 106 ntBASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 MIR578-201ENST00000384828 96 ntBASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 SNORD70.1-201ENST00000391007 85 ntBASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 RNU6-1068P-201ENST00000410958 103 ntBASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 SKA2P1-201ENST00000425592 390 ntBASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 AC091286.1-201ENST00000431233 461 ntBASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 USP9YP28-201ENST00000435142 589 ntBASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 RPL7P28-201ENST00000437739 740 ntBASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 NDUFB1P2-201ENST00000449477 176 ntBASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 AL049830.2-201ENST00000480072 201 ntBASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 AC022493.1-201ENST00000492984 337 ntBASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 SUB1P1-201ENST00000524415 382 ntBASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 MTCO3P24-201ENST00000572729 782 ntBASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 MIR4424-201ENST00000585257 86 ntBASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 MTND4LP5-201ENST00000605152 292 ntBASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 AC110741.2-201ENST00000605278 268 ntBASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 Z82243.1-201ENST00000609432 473 ntBASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 MIR6075-201ENST00000620782 95 ntBASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL4A3BPQ9Y5P4 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL4A3BPQ9Y5P4 RNU6-451P-201ENST00000362921 107 ntBASIC4.1□□□□□ -1.75
COL4A3BPQ9Y5P4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
COL4A3BPQ9Y5P4 RPL5P18-201ENST00000406671 891 ntBASIC4.1□□□□□ -1.75
COL4A3BPQ9Y5P4 RNU6-373P-201ENST00000411247 98 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms