Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AL122016.1-201ENST00000403365 367 ntBASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 AL354751.2-201ENST00000415471 210 ntBASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 Z85995.1-201ENST00000415547 335 ntBASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 HSPD1P21-201ENST00000436541 245 ntBASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 PRPS1P1-201ENST00000445305 876 ntBASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 PPP1R2P5-201ENST00000457256 603 ntBASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 RNU7-167P-201ENST00000459160 62 ntBASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 RPL21P41-201ENST00000459863 264 ntBASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 RPL21P93-201ENST00000480465 489 ntBASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 SNORA19.2-201ENST00000516013 114 ntBASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 RNU1-95P-201ENST00000516357 160 ntBASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 RNA5SP309-201ENST00000516670 106 ntBASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 RNU1-128P-201ENST00000516704 160 ntBASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 SCOCP1-201ENST00000554676 349 ntBASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 AL161798.1-201ENST00000604630 131 ntBASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 AC008725.1-201ENST00000605123 2263 ntBASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 AL161912.2-201ENST00000565707 3007 ntBASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 Y_RNA.167-201ENST00000363735 109 ntBASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 RNU6-371P-201ENST00000364283 108 ntBASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 RNU6-512P-201ENST00000364438 103 ntBASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 RNA5SP97-201ENST00000365006 84 ntBASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 SNORA5A-201ENST00000384111 134 ntBASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 MIR199A2-201ENST00000385289 110 ntBASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 SNORA16.2-201ENST00000390991 127 ntBASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 RNU2-33P-201ENST00000410344 192 ntBASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 BX682237.1-201ENST00000415016 335 ntBASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 RPS3AP12-201ENST00000443616 753 ntBASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 AC012181.1-201ENST00000479895 423 ntBASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 RNU2-69P-201ENST00000516061 100 ntBASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 RNA5SP471-201ENST00000516971 106 ntBASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 AC090136.1-201ENST00000520009 240 ntBASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 AC105029.1-201ENST00000520250 669 ntBASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 IGKV2D-19-201ENST00000523346 262 ntBASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 AP000763.2-201ENST00000540641 163 ntBASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 MIR1273C-201ENST00000578669 77 ntBASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 BNIP3P25-201ENST00000596023 559 ntBASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 AC021646.1-201ENST00000605469 484 ntBASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 AC096577.2-201ENST00000611455 153 ntBASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 AL512643.1-201ENST00000635735 524 ntBASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 TPTEP1-208ENST00000636884 213 ntBASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 AL672296.1-201ENST00000427780 2158 ntBASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHB1Q9Y5F3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 Y_RNA.245-201ENST00000364493 95 ntBASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 RNU6-45P-201ENST00000384471 107 ntBASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 RNA5SP219-201ENST00000390940 113 ntBASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 HLFP1-201ENST00000402375 499 ntBASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 NDUFB4P5-201ENST00000415445 361 ntBASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 AL669831.1-202ENST00000428504 417 ntBASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 AL592045.1-201ENST00000429867 352 ntBASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 GPM6BP2-201ENST00000432046 144 ntBASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 GTF2IP13-201ENST00000438487 386 ntBASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 GPM6BP1-201ENST00000446387 144 ntBASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 PPIAP15-201ENST00000479662 484 ntBASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 HMGN1P13-201ENST00000505795 138 ntBASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 AC103851.1-201ENST00000506833 274 ntBASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 RNU6-864P-201ENST00000516256 108 ntBASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 RNU6-277P-201ENST00000516272 106 ntBASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 CYCSP30-201ENST00000546447 172 ntBASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 AC026464.5-201ENST00000562497 722 ntBASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 AL355375.2-201ENST00000574825 175 ntBASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 MIR3200-201ENST00000580767 85 ntBASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 AC007687.1-201ENST00000602704 304 ntBASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 AC090574.1-201ENST00000623186 233 ntBASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 AC022418.1-201ENST00000624118 445 ntBASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 Z99571.1-201ENST00000636677 394 ntBASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms