Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AC124293.1-201ENST00000530034 493 ntBASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 MIR4513-201ENST00000581077 86 ntBASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 AL645939.4-201ENST00000604495 135 ntBASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 AC009974.1-201ENST00000608881 455 ntBASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 AC096586.1-201ENST00000610267 561 ntBASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 VN1R9P-201ENST00000614184 867 ntBASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 AC026634.1-201ENST00000634369 198 ntBASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 MTND1P37-201ENST00000636562 264 ntBASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
COMMD3Q9UBI1 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.07□□□□□ -2.24
COMMD3Q9UBI1 NDUFS5P4-201ENST00000412983 318 ntBASIC1.07□□□□□ -2.24
COMMD3Q9UBI1 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.07□□□□□ -2.24
COMMD3Q9UBI1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.07□□□□□ -2.24
COMMD3Q9UBI1 PPP1R11P2-201ENST00000423543 382 ntBASIC1.07□□□□□ -2.24
COMMD3Q9UBI1 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.07□□□□□ -2.24
COMMD3Q9UBI1 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.07□□□□□ -2.24
COMMD3Q9UBI1 AC092393.1-201ENST00000439625 742 ntBASIC1.07□□□□□ -2.24
COMMD3Q9UBI1 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.07□□□□□ -2.24
COMMD3Q9UBI1 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.07□□□□□ -2.24
COMMD3Q9UBI1 SNORA59A-201ENST00000459326 152 ntBASIC1.07□□□□□ -2.24
COMMD3Q9UBI1 RPL32P14-201ENST00000463196 378 ntBASIC1.07□□□□□ -2.24
COMMD3Q9UBI1 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.07□□□□□ -2.24
COMMD3Q9UBI1 SNORA44.1-201ENST00000517031 108 ntBASIC1.07□□□□□ -2.24
COMMD3Q9UBI1 DUXAP5-201ENST00000529668 529 ntBASIC1.07□□□□□ -2.24
COMMD3Q9UBI1 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.07□□□□□ -2.24
COMMD3Q9UBI1 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.07□□□□□ -2.24
COMMD3Q9UBI1 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.07□□□□□ -2.24
COMMD3Q9UBI1 MIR3683-201ENST00000580847 82 ntBASIC1.07□□□□□ -2.24
COMMD3Q9UBI1 AC104763.2-201ENST00000604179 382 ntBASIC1.07□□□□□ -2.24
COMMD3Q9UBI1 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.07□□□□□ -2.24
COMMD3Q9UBI1 RMST_6.1-201ENST00000611980 203 ntBASIC1.07□□□□□ -2.24
COMMD3Q9UBI1 MIR5739-201ENST00000619803 80 ntBASIC1.07□□□□□ -2.24
COMMD3Q9UBI1 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
COMMD3Q9UBI1 SGO1P1-201ENST00000603525 1447 ntBASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 SNORD26-201ENST00000384147 75 ntBASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 AL121578.1-201ENST00000428051 892 ntBASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 AC007919.1-201ENST00000429380 217 ntBASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 CYP2C59P-201ENST00000457790 269 ntBASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 AC117503.1-201ENST00000472241 394 ntBASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 AC084024.2-201ENST00000503480 791 ntBASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 MTND4P2-201ENST00000507767 1203 ntBASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 RNU6-362P-201ENST00000516736 90 ntBASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 AC008127.2-201ENST00000549925 1075 ntBASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 IMMP1LP2-201ENST00000552954 492 ntBASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 SUB1P3-201ENST00000564581 315 ntBASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 DUXAP11-201ENST00000603858 526 ntBASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 AC018638.7-201ENST00000605836 1114 ntBASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 AC007490.1-201ENST00000624321 703 ntBASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 MIR3199-2-201ENST00000636243 86 ntBASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
COMMD3Q9UBI1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
COMMD3Q9UBI1 MIR95-201ENST00000385072 81 ntBASIC1.05□□□□□ -2.24
COMMD3Q9UBI1 SNORA26.9-201ENST00000391322 122 ntBASIC1.05□□□□□ -2.24
COMMD3Q9UBI1 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
COMMD3Q9UBI1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
COMMD3Q9UBI1 AL449283.1-202ENST00000418249 604 ntBASIC1.05□□□□□ -2.24
COMMD3Q9UBI1 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.05□□□□□ -2.24
COMMD3Q9UBI1 FAM204CP-201ENST00000424489 642 ntBASIC1.05□□□□□ -2.24
COMMD3Q9UBI1 ZNF965P-201ENST00000432501 817 ntBASIC1.05□□□□□ -2.24
COMMD3Q9UBI1 HMGB1P31-201ENST00000437242 427 ntBASIC1.05□□□□□ -2.24
COMMD3Q9UBI1 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.05□□□□□ -2.24
COMMD3Q9UBI1 AL050341.1-201ENST00000447743 313 ntBASIC1.05□□□□□ -2.24
COMMD3Q9UBI1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.05□□□□□ -2.24
COMMD3Q9UBI1 FAM92A1P2-202ENST00000504766 877 ntBASIC1.05□□□□□ -2.24
COMMD3Q9UBI1 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.05□□□□□ -2.24
COMMD3Q9UBI1 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.05□□□□□ -2.24
COMMD3Q9UBI1 RNU1-41P-201ENST00000516161 162 ntBASIC1.05□□□□□ -2.24
COMMD3Q9UBI1 RNU1-48P-201ENST00000516400 162 ntBASIC1.05□□□□□ -2.24
COMMD3Q9UBI1 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.05□□□□□ -2.24
COMMD3Q9UBI1 NACAP3-201ENST00000552100 481 ntBASIC1.05□□□□□ -2.24
COMMD3Q9UBI1 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.05□□□□□ -2.24
COMMD3Q9UBI1 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.05□□□□□ -2.24
COMMD3Q9UBI1 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.05□□□□□ -2.24
COMMD3Q9UBI1 AP003476.1-201ENST00000623984 516 ntBASIC1.05□□□□□ -2.24
COMMD3Q9UBI1 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
COMMD3Q9UBI1 AP005901.5-201ENST00000545779 1796 ntBASIC1.05□□□□□ -2.24
COMMD3Q9UBI1 AP000776.1-201ENST00000530032 1663 ntBASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 RNA5SP126-201ENST00000365092 109 ntBASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 SNORA25B-201ENST00000365507 128 ntBASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 RNU6-939P-201ENST00000384634 107 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms